Os07g0206500
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : 13 kDa prolamin precursor.
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Os07g0206500 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : 13 kDa prolamin precursor.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = radiation,
response mode = < th, dose dependency = dose dependent, type of G = rect.)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 92.76 | 0.453 | 3.06 | 0.0821 | 0.134 | 5.21 | -0.0949 | 20.8 | 0.0324 | 2.63 | 7.539 | 74 | 8.02 | 3.85 |
| 105.44 | 0.478 | 3.04 | -0.0207 | 0.118 | 2.25 | -0.24 | -- | 0.0414 | 2.42 | 10.18 | 53 | 8.23 | 3.94 |
| 90.89 | 0.444 | 3.07 | 0.132 | 0.155 | 6.15 | -- | 25.6 | 0.0227 | 3.39 | 6.762 | 85 | 8.25 | 3.66 |
| 105.67 | 0.479 | 3.04 | -0.00903 | 0.124 | 2.27 | -- | -- | 0.0394 | 2.09 | 10.14 | 53 | 8.02 | 4.24 |
| 91.12 | 0.445 | 3.06 | 0.13 | -- | 6.67 | -- | 28.1 | 0.0507 | -- | 6.512 | 84 | 8.62 | 3.6 |
| 118.56 | 0.51 | 3.04 | -0.0383 | 0.0967 | -- | -0.448 | -- | 0.00347 | 5.16 | -- | -- | -- | -- |
| 119.07 | 0.511 | 3.04 | -0.0383 | 0.0937 | -- | -- | -- | 0.00555 | 4.99 | -- | -- | -- | -- |
| 106.56 | 0.481 | 3.04 | -0.00684 | -- | 2.21 | -- | -- | 0.0401 | -- | 9.996 | 53 | 8.18 | 4.62 |
| 105.67 | 0.479 | 3.04 | -- | 0.124 | 2.27 | -- | -- | 0.0402 | 2.09 | 10.15 | 53 | 8.08 | 4.42 |
| 119.53 | 0.511 | 3.04 | -0.0349 | -- | -- | -- | -- | 0.00795 | -- | -- | -- | -- | -- |
| 119.1 | 0.511 | 3.04 | -- | 0.093 | -- | -- | -- | 0.00982 | 5 | -- | -- | -- | -- |
| 106.56 | 0.481 | 3.04 | -- | -- | 2.21 | -- | -- | 0.0409 | -- | 9.992 | 53 | 8.15 | 4.59 |
| 119.56 | 0.51 | 3.04 | -- | -- | -- | -- | -- | 0.0118 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 98.01 | radiation | 10 | 90 | < th | dose dependent | rect. | 8 | 4 |
| 2 | 99.34 | wind | 1 | 90 | < th | dose dependent | rect. | 8 | 1 |
| 4 | 101.55 | wind | 1 | 90 | < th | dose independent | rect. | 8 | 1 |
| 16 | 105.77 | radiation | 10 | 10 | < th | dose independent | rect. | 10 | 2 |
| 20 | 105.85 | radiation | 10 | 10 | < th | dose dependent | rect. | 12 | 1 |
| 42 | 107.21 | wind | 1 | 10 | < th | dose dependent | rect. | 1 | 2 |
| 52 | 107.40 | wind | 7 | 1440 | > th | dose independent | rect. | 1 | 2 |
| 53 | 107.40 | wind | 7 | 1440 | > th | dose dependent | rect. | 1 | 2 |
| 65 | 107.51 | wind | 1 | 10 | < th | dose dependent | rect. | 9 | 18 |
| 68 | 107.66 | wind | 1 | 10 | < th | dose dependent | rect. | 21 | 6 |
| 83 | 107.89 | wind | 1 | 10 | < th | dose dependent | rect. | 11 | 16 |
| 132 | 109.53 | wind | 1 | 10 | < th | dose independent | rect. | 1 | 1 |
| 147 | 109.86 | wind | 1 | 10 | < th | dose independent | rect. | 9 | 17 |
| 155 | 110.15 | wind | 1 | 10 | < th | dose independent | rect. | 21 | 5 |
| 172 | 110.83 | atmosphere | 1015 | 1440 | < th | dose independent | rect. | 13 | 1 |
| 173 | 110.87 | atmosphere | 1015 | 1440 | > th | dose independent | rect. | 12 | 1 |
| 176 | 110.87 | atmosphere | 1015 | 1440 | > th | dose dependent | rect. | 12 | 1 |
| 189 | 110.88 | wind | 1 | 10 | < th | dose independent | rect. | 11 | 15 |
| 212 | 111.10 | humidity | 80 | 30 | > th | dose dependent | rect. | 9 | 1 |
| 214 | 111.14 | atmosphere | 1015 | 1440 | < th | dose independent | rect. | 12 | 5 |
| 247 | 111.54 | wind | 1 | 10 | < th | dose dependent | sin | 18 | NA |
| 267 | 111.94 | atmosphere | 1010 | 720 | > th | dose dependent | rect. | 1 | 1 |
| 321 | 112.45 | wind | 1 | 90 | < th | dose dependent | rect. | 8 | 19 |
| 335 | 112.58 | temperature | 25 | 10 | < th | dose dependent | rect. | 12 | 1 |
| 403 | 113.16 | humidity | 80 | 10 | > th | dose independent | rect. | 10 | 1 |
| 417 | 113.22 | wind | 1 | 10 | < th | dose independent | sin | 18 | NA |
| 466 | 113.63 | wind | 1 | 43200 | < th | dose dependent | rect. | 5 | 7 |
| 473 | 113.68 | humidity | 70 | 43200 | > th | dose dependent | rect. | 5 | 1 |
| 474 | 113.68 | atmosphere | 1015 | 43200 | > th | dose dependent | rect. | 3 | 1 |
| 488 | 113.79 | radiation | 10 | 14400 | > th | dose independent | rect. | 11 | 1 |
| 493 | 113.81 | wind | 3 | 14400 | < th | dose independent | rect. | 5 | 1 |
| 503 | 113.85 | wind | 3 | 14400 | > th | dose independent | rect. | 5 | 1 |
| 504 | 113.85 | wind | 3 | 14400 | < th | dose dependent | rect. | 4 | 2 |
| 518 | 113.92 | humidity | 90 | 43200 | < th | dose independent | rect. | 24 | 2 |
| 533 | 113.96 | wind | 1 | 270 | < th | dose independent | rect. | 22 | 1 |
| 534 | 113.96 | humidity | 90 | 43200 | > th | dose independent | rect. | 24 | 1 |
| 535 | 113.96 | temperature | 20 | 10 | > th | dose independent | rect. | 10 | 15 |
| 563 | 114.05 | atmosphere | 1015 | 1440 | < th | dose independent | rect. | 2 | 18 |
| 573 | 114.07 | humidity | 90 | 43200 | < th | dose independent | rect. | 23 | 7 |
| 580 | 114.08 | wind | 1 | 4320 | < th | dose dependent | rect. | 22 | 1 |
| 581 | 114.08 | humidity | 80 | 43200 | > th | dose dependent | rect. | 1 | 1 |
| 585 | 114.09 | atmosphere | 1015 | 1440 | < th | dose independent | rect. | 7 | 13 |
| 590 | 114.10 | atmosphere | 1015 | 1440 | < th | dose independent | sin | 22 | NA |
| 609 | 114.12 | humidity | 80 | 43200 | > th | dose dependent | rect. | 1 | 5 |
| 635 | 114.16 | wind | 1 | 14400 | > th | dose dependent | rect. | 4 | 2 |
| 639 | 114.17 | wind | 1 | 270 | < th | dose dependent | rect. | 22 | 1 |
| 645 | 114.18 | atmosphere | 1015 | 1440 | < th | dose independent | rect. | 19 | 1 |
| 658 | 114.19 | humidity | 90 | 43200 | < th | dose independent | rect. | 4 | 2 |
| 672 | 114.20 | wind | 7 | 14400 | < th | dose independent | rect. | 23 | 4 |
| 675 | 114.20 | wind | 1 | 43200 | < th | dose dependent | sin | 3 | NA |
| 681 | 114.21 | wind | 7 | 14400 | > th | dose independent | rect. | 23 | 4 |
| 683 | 114.21 | wind | 1 | 43200 | > th | dose independent | rect. | 5 | 6 |
| 691 | 114.21 | wind | 7 | 14400 | > th | dose dependent | rect. | 23 | 4 |
| 695 | 114.22 | wind | 5 | 14400 | > th | dose independent | rect. | 1 | 2 |
| 716 | 114.24 | wind | 5 | 14400 | < th | dose independent | rect. | 2 | 1 |
| 728 | 114.24 | wind | 1 | 43200 | < th | dose dependent | rect. | 6 | 4 |
| 755 | 114.26 | wind | 5 | 14400 | > th | dose independent | rect. | 8 | 2 |
| 769 | 114.26 | humidity | 50 | 43200 | > th | dose dependent | rect. | 1 | 5 |
| 777 | 114.27 | wind | 1 | 43200 | < th | dose independent | rect. | 5 | 7 |
| 783 | 114.27 | wind | 5 | 14400 | > th | dose dependent | rect. | 2 | 1 |
| 786 | 114.27 | humidity | 50 | 43200 | > th | dose dependent | rect. | 1 | 1 |
| 807 | 114.28 | wind | 1 | 43200 | < th | dose dependent | rect. | 7 | 2 |
| 816 | 114.29 | wind | 9 | 14400 | > th | dose independent | rect. | 20 | 2 |
| 849 | 114.31 | wind | 1 | 43200 | < th | dose independent | rect. | 3 | 12 |
| 868 | 114.31 | wind | 1 | 270 | < th | dose dependent | rect. | 8 | 16 |
| 901 | 114.33 | wind | 5 | 14400 | < th | dose independent | rect. | 8 | 2 |
| 939 | 114.34 | humidity | 90 | 14400 | > th | dose dependent | rect. | 11 | 1 |
| 948 | 114.34 | wind | 1 | 270 | < th | dose dependent | rect. | 22 | 5 |
| 964 | 114.35 | wind | 5 | 14400 | > th | dose dependent | rect. | 8 | 1 |
| 983 | 114.36 | wind | 1 | 43200 | < th | dose independent | sin | 5 | NA |
| 984 | 114.36 | humidity | 80 | 14400 | < th | dose independent | rect. | 9 | 1 |