Os07g0202000
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : UDP-glucuronosyl/UDP-glucosyltransferase family protein.
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Os07g0202000 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : UDP-glucuronosyl/UDP-glucosyltransferase family protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 152.41 | 0.58 | 3.91 | 0.72 | 0.525 | -0.735 | 0.118 | -0.116 | 0.227 | 5.87 | 20.52 | 772 | -- | -- |
| 151.6 | 0.573 | 3.9 | 0.728 | 0.521 | -0.69 | 0.132 | -- | 0.261 | 5.76 | 21.4 | 809 | -- | -- |
| 151.56 | 0.573 | 3.91 | 0.689 | 0.52 | -0.714 | -- | -0.19 | 0.251 | 5.64 | 21.4 | 818 | -- | -- |
| 151.64 | 0.574 | 3.9 | 0.726 | 0.519 | -0.688 | -- | -- | 0.259 | 5.69 | 21.38 | 809 | -- | -- |
| 164.95 | 0.598 | 3.91 | 0.72 | -- | -0.748 | -- | -0.178 | 0.276 | -- | 21.37 | 748 | -- | -- |
| 167.29 | 0.606 | 3.94 | 0.47 | 0.576 | -- | 0.419 | -- | 0.0719 | 6.62 | -- | -- | -- | -- |
| 167.7 | 0.606 | 3.94 | 0.475 | 0.579 | -- | -- | -- | 0.0702 | 6.46 | -- | -- | -- | -- |
| 165.09 | 0.598 | 3.9 | 0.755 | -- | -0.737 | -- | -- | 0.284 | -- | 21.35 | 745 | -- | -- |
| 164.07 | 0.597 | 3.92 | -- | 0.546 | -0.46 | -- | -- | 0.149 | 5.89 | 21.81 | 783 | -- | -- |
| 185.14 | 0.636 | 3.95 | 0.49 | -- | -- | -- | -- | 0.0824 | -- | -- | -- | -- | -- |
| 173.65 | 0.616 | 3.95 | -- | 0.586 | -- | -- | -- | 0.0173 | 6.41 | -- | -- | -- | -- |
| 178.49 | 0.622 | 3.93 | -- | -- | -0.531 | -- | -- | 0.168 | -- | 21.7 | 673 | -- | -- |
| 191.47 | 0.646 | 3.96 | -- | -- | -- | -- | -- | 0.028 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 139.49 | temperature | 15 | 720 | > th | dose dependent | rect. | 3 | 4 |
| 2 | 139.74 | temperature | 30 | 270 | < th | dose dependent | rect. | 24 | 13 |
| 3 | 139.78 | temperature | 30 | 270 | < th | dose dependent | rect. | 24 | 11 |
| 10 | 141.09 | temperature | 20 | 720 | > th | dose independent | rect. | 3 | 4 |
| 14 | 141.55 | temperature | 15 | 270 | > th | dose dependent | rect. | 3 | 10 |
| 40 | 143.05 | temperature | 20 | 270 | > th | dose dependent | rect. | 3 | 8 |
| 48 | 143.38 | temperature | 30 | 10 | < th | dose dependent | rect. | 2 | 10 |
| 56 | 143.68 | temperature | 30 | 720 | < th | dose dependent | rect. | 24 | 5 |
| 63 | 143.92 | temperature | 10 | 720 | > th | dose dependent | rect. | 23 | 8 |
| 85 | 144.76 | temperature | 25 | 30 | < th | dose independent | rect. | 2 | 10 |
| 91 | 144.86 | temperature | 30 | 270 | < th | dose dependent | sin | 6 | NA |
| 95 | 144.95 | temperature | 25 | 90 | > th | dose independent | rect. | 3 | 12 |
| 102 | 145.00 | temperature | 30 | 720 | < th | dose dependent | rect. | 24 | 3 |
| 118 | 145.31 | temperature | 15 | 270 | > th | dose dependent | sin | 6 | NA |
| 130 | 145.46 | temperature | 20 | 720 | > th | dose independent | rect. | 22 | 9 |
| 201 | 146.36 | temperature | 30 | 10 | < th | dose dependent | sin | 3 | NA |
| 245 | 146.85 | temperature | 20 | 720 | > th | dose independent | rect. | 21 | 12 |
| 252 | 146.91 | temperature | 20 | 720 | > th | dose independent | rect. | 21 | 18 |
| 292 | 147.22 | temperature | 10 | 10 | > th | dose dependent | sin | 3 | NA |
| 301 | 147.26 | temperature | 25 | 720 | < th | dose dependent | rect. | 3 | 2 |
| 321 | 147.36 | temperature | 20 | 720 | > th | dose independent | sin | 7 | NA |
| 471 | 148.44 | temperature | 20 | 720 | > th | dose independent | rect. | 1 | 14 |
| 510 | 148.67 | temperature | 25 | 10 | > th | dose independent | sin | 3 | NA |
| 511 | 148.67 | temperature | 25 | 30 | < th | dose independent | sin | 4 | NA |
| 576 | 149.09 | temperature | 20 | 720 | < th | dose independent | rect. | 24 | 6 |
| 605 | 149.25 | temperature | 20 | 720 | > th | dose independent | rect. | 12 | 19 |
| 803 | 150.29 | temperature | 20 | 720 | > th | dose independent | rect. | 12 | 21 |
| 875 | 150.57 | temperature | 20 | 720 | < th | dose independent | rect. | 5 | 1 |
| 937 | 150.82 | temperature | 25 | 10 | < th | dose independent | rect. | 2 | 7 |
| 946 | 150.88 | temperature | 20 | 720 | < th | dose independent | sin | 9 | NA |