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Notice!
This gene did NOT pass the analysis criteria (log2(expression) > 5 in more than 80% of samples & normality of residuals was not rejected).
The modeling results may be unreliable.

Os07g0201500

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : UDP-glucuronosyl/UDP-glucosyltransferase family protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 2.74 (0.445) R2 : -194
β1 : -1.59 (1.64) R2dD : 1.92 R2D : -0.716
β2 : 0.133 (1.16) R2dC : -0.00533 R2C : -0.404
β3 : 16.1 (1.38) R2dE : -68.8 R2E : -61.7
β4 : -0.246 (5.32) R2dD*C : 0.0314 R2D*C : -0.414
β5 : 77.7 (4.57) R2dD*E : -132 R2D*E : -127
γ1 : 0.211 (0.963) R2dN8 : 0.333 R2N8 : -0.268
σ : 0.531
deviance : 127.95
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_____
C
peak time of C : 5.71
E
wheather : wind
threshold : 4
memory length : 7
response mode : < th
dose dependency : dose independent
G
type of G : rect.
peak or start time of G : 23
open length of G : 1

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = wind, response mode = < th, dose dependency = dose independent, type of G = rect.)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
127.95 0.531 2.74 -1.59 0.133 16.1 -0.246 77.7 0.211 5.71 4 7 23 1
149.74 0.574 3.06 -0.129 0.228 -0.233 0.0131 -- 0.296 1.49 4 7 23 1
149.52 0.574 3.06 -0.144 0.228 -0.24 -- 0.252 0.291 1.51 4 7 23 1
147.27 0.565 3.06 -0.139 0.236 -0.272 -- -- 0.286 1.33 4.099 53 23 2.59
148.25 0.567 3.05 -0.127 -- -0.236 -- 0.165 0.294 -- 3.904 1255 23.1 0.9
151.35 0.577 3.05 -0.131 0.155 -- -0.0655 -- 0.325 2.49 -- -- -- --
151.36 0.576 3.05 -0.13 0.155 -- -- -- 0.325 2.37 -- -- -- --
147.92 0.566 3.05 -0.129 -- -0.238 -- -- 0.294 -- 4.3 1256 23.1 0.833
147.58 0.566 3.05 -- 0.268 -0.3 -- -- 0.281 1.56 4.454 68 23 2.48
152.78 0.578 3.05 -0.123 -- -- -- -- 0.329 -- -- -- -- --
151.81 0.576 3.04 -- 0.152 -- -- -- 0.339 2.36 -- -- -- --
147.13 0.565 3.05 -- -- -0.312 -- -- 0.283 -- 4.238 1248 23.2 0.3
153.18 0.578 3.04 -- -- -- -- -- 0.342 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 127.95 wind 7.0 1440 < th dose independent rect. 23 1
3 129.22 temperature 10.0 1440 > th dose independent rect. 23 1
6 129.22 temperature 30.0 1440 < th dose independent rect. 23 1
10 129.22 humidity 50.0 1440 > th dose independent rect. 23 1
20 129.22 atmosphere 995.0 1440 > th dose independent rect. 23 1
21 129.22 radiation 1.0 1440 < th dose independent rect. 23 1
41 129.22 temperature 10.0 1440 > th dose independent rect. 24 23
44 129.22 radiation 1.0 1440 < th dose dependent rect. 23 1
49 129.30 humidity 90.0 30 < th dose independent rect. 22 1
50 129.31 atmosphere 1005.0 30 > th dose dependent rect. 22 1
52 129.39 atmosphere 1005.0 30 > th dose independent rect. 22 1
54 129.44 temperature 25.0 30 > th dose independent rect. 22 1
55 129.46 temperature 15.0 30 > th dose dependent rect. 22 1
58 129.51 precipitation 0.1 30 < th dose independent rect. 22 1
59 129.51 precipitation 0.1 30 < th dose dependent rect. 22 1
60 129.52 wind 1.0 30 > th dose independent rect. 22 1
64 129.59 wind 5.0 30 < th dose independent rect. 22 1
67 129.59 temperature 10.0 30 > th dose independent rect. 22 1
69 129.59 temperature 30.0 30 < th dose independent rect. 22 1
70 129.59 humidity 50.0 30 > th dose independent rect. 22 1
74 129.59 atmosphere 1010.0 30 < th dose independent rect. 22 1
76 129.59 radiation 1.0 30 < th dose independent rect. 22 1
81 129.59 temperature 10.0 30 > th dose independent rect. 23 23
82 129.59 radiation 1.0 30 < th dose dependent rect. 22 1
88 129.63 wind 9.0 30 < th dose dependent rect. 22 1
90 129.69 humidity 90.0 30 < th dose dependent rect. 22 1
92 129.72 humidity 50.0 30 > th dose dependent rect. 22 1
97 129.82 wind 1.0 30 > th dose dependent rect. 22 1
99 130.10 wind 9.0 30 < th dose independent rect. 23 23
101 130.31 atmosphere 1015.0 30 < th dose dependent rect. 22 1
103 130.51 temperature 30.0 30 < th dose dependent rect. 22 1
124 132.46 humidity 70.0 90 < th dose independent rect. 6 3
164 133.24 humidity 70.0 1440 > th dose independent rect. 24 7
166 133.24 humidity 80.0 90 < th dose dependent rect. 22 11
167 133.29 humidity 80.0 90 < th dose dependent rect. 22 9
168 133.31 humidity 80.0 90 < th dose dependent rect. 5 4
170 133.31 humidity 80.0 90 < th dose dependent rect. 2 7
211 133.55 radiation 20.0 90 > th dose independent rect. 6 1
225 133.55 radiation 20.0 90 > th dose dependent rect. 6 1
239 133.55 humidity 70.0 90 < th dose dependent rect. 18 14
257 133.64 humidity 70.0 10 < th dose independent rect. 7 1
722 135.11 radiation 1.0 90 < th dose independent rect. 14 1
723 135.11 radiation 1.0 90 < th dose dependent rect. 14 1
743 135.32 temperature 20.0 90 < th dose dependent rect. 12 4
745 135.35 temperature 20.0 10 < th dose dependent rect. 12 5
746 135.38 temperature 20.0 30 < th dose independent rect. 14 3
763 135.39 temperature 20.0 90 < th dose dependent rect. 14 1
775 135.47 humidity 70.0 1440 > th dose independent rect. 22 9
811 135.56 humidity 70.0 4320 < th dose independent rect. 6 1
823 135.56 humidity 70.0 4320 < th dose dependent rect. 6 1
915 135.68 humidity 70.0 1440 > th dose independent rect. 6 1