Os07g0201300
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description :
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Os07g0201300 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description :
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = precipitation,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 279.52 | 0.786 | 6.99 | 0.204 | 0.37 | -1.01 | 0.0736 | -2.16 | -0.768 | 13 | 0.0002323 | 6729 | -- | -- |
| 285.72 | 0.787 | 6.96 | 0.282 | 0.332 | -1.16 | -0.0177 | -- | -0.718 | 13.1 | 0.6627 | 6438 | -- | -- |
| 279.54 | 0.779 | 6.99 | 0.206 | 0.369 | -1.01 | -- | -2.16 | -0.767 | 13 | 0.0001656 | 6730 | -- | -- |
| 285.68 | 0.787 | 6.96 | 0.284 | 0.332 | -1.16 | -- | -- | -0.718 | 13 | 0.661 | 6678 | -- | -- |
| 288.05 | 0.79 | 6.99 | 0.205 | -- | -1.01 | -- | -2.2 | -0.766 | -- | 1.843e-07 | 6727 | -- | -- |
| 310.89 | 0.827 | 6.94 | -0.0681 | 0.356 | -- | 0.119 | -- | -0.636 | 13.1 | -- | -- | -- | -- |
| 310.95 | 0.826 | 6.94 | -0.0638 | 0.356 | -- | -- | -- | -0.636 | 13.1 | -- | -- | -- | -- |
| 292.6 | 0.797 | 6.96 | 0.272 | -- | -1.18 | -- | -- | -0.727 | -- | 0.6238 | 6535 | -- | -- |
| 287.52 | 0.79 | 6.97 | -- | 0.33 | -1.06 | -- | -- | -0.741 | 13 | 0.6418 | 6520 | -- | -- |
| 318.81 | 0.834 | 6.95 | -0.0774 | -- | -- | -- | -- | -0.643 | -- | -- | -- | -- | -- |
| 311.06 | 0.825 | 6.94 | -- | 0.357 | -- | -- | -- | -0.629 | 13.1 | -- | -- | -- | -- |
| 292.07 | 0.796 | 6.97 | -- | -- | -1.2 | -- | -- | -0.731 | -- | 0.8349 | 2731 | -- | -- |
| 318.97 | 0.834 | 6.94 | -- | -- | -- | -- | -- | -0.634 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 268.06 | humidity | 80.0 | 1440 | < th | dose independent | rect. | 11 | 1 |
| 2 | 268.41 | precipitation | 0.1 | 4320 | > th | dose independent | rect. | 3 | 14 |
| 3 | 268.55 | precipitation | 0.1 | 4320 | > th | dose dependent | rect. | 1 | 16 |
| 4 | 268.56 | precipitation | 0.1 | 4320 | < th | dose independent | rect. | 3 | 14 |
| 5 | 268.56 | precipitation | 0.1 | 4320 | < th | dose dependent | rect. | 3 | 14 |
| 7 | 268.69 | precipitation | 0.1 | 4320 | < th | dose independent | rect. | 4 | 6 |
| 8 | 268.69 | precipitation | 0.1 | 4320 | < th | dose dependent | rect. | 4 | 6 |
| 12 | 268.88 | precipitation | 0.1 | 4320 | > th | dose independent | rect. | 1 | 16 |
| 13 | 269.01 | precipitation | 0.1 | 4320 | < th | dose independent | rect. | 1 | 16 |
| 14 | 269.01 | precipitation | 0.1 | 4320 | < th | dose dependent | rect. | 1 | 16 |
| 20 | 269.20 | precipitation | 0.1 | 4320 | > th | dose dependent | rect. | 4 | 6 |
| 21 | 269.22 | precipitation | 0.1 | 4320 | > th | dose independent | rect. | 4 | 6 |
| 22 | 269.47 | wind | 5.0 | 14400 | < th | dose dependent | rect. | 2 | 2 |
| 26 | 269.52 | precipitation | 0.1 | 4320 | < th | dose independent | rect. | 4 | 3 |
| 27 | 269.52 | precipitation | 0.1 | 4320 | < th | dose dependent | rect. | 4 | 3 |
| 29 | 269.61 | precipitation | 0.1 | 4320 | > th | dose independent | rect. | 4 | 3 |
| 33 | 269.79 | precipitation | 0.1 | 4320 | > th | dose dependent | rect. | 4 | 3 |
| 34 | 269.81 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 17 | 1 |
| 39 | 270.03 | humidity | 80.0 | 1440 | > th | dose independent | rect. | 11 | 1 |
| 44 | 270.14 | wind | 3.0 | 14400 | < th | dose independent | rect. | 2 | 2 |
| 46 | 270.17 | wind | 3.0 | 14400 | < th | dose independent | rect. | 24 | 4 |
| 53 | 270.45 | precipitation | 0.1 | 4320 | < th | dose independent | rect. | 3 | 11 |
| 55 | 270.45 | precipitation | 0.1 | 4320 | < th | dose dependent | rect. | 3 | 11 |
| 67 | 270.66 | precipitation | 0.1 | 4320 | > th | dose independent | rect. | 3 | 11 |
| 69 | 270.74 | precipitation | 0.1 | 4320 | > th | dose dependent | rect. | 3 | 10 |
| 70 | 270.75 | humidity | 90.0 | 1440 | > th | dose dependent | rect. | 7 | 2 |
| 83 | 270.99 | wind | 9.0 | 14400 | < th | dose independent | rect. | 6 | 5 |
| 84 | 271.02 | wind | 3.0 | 14400 | < th | dose dependent | rect. | 4 | 1 |
| 85 | 271.03 | wind | 1.0 | 14400 | > th | dose dependent | rect. | 1 | 3 |
| 115 | 271.54 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 18 | 1 |
| 120 | 271.58 | wind | 3.0 | 14400 | > th | dose independent | rect. | 24 | 5 |
| 128 | 271.70 | humidity | 80.0 | 1440 | > th | dose dependent | rect. | 7 | 5 |
| 138 | 271.85 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 18 | 2 |
| 139 | 271.85 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 18 | 2 |
| 145 | 271.93 | wind | 3.0 | 14400 | > th | dose independent | rect. | 3 | 1 |
| 157 | 272.07 | wind | 9.0 | 14400 | < th | dose independent | rect. | 10 | 1 |
| 172 | 272.23 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 13 | 4 |
| 181 | 272.31 | precipitation | 0.1 | 4320 | < th | dose independent | sin | 3 | NA |
| 182 | 272.31 | precipitation | 0.1 | 4320 | < th | dose dependent | sin | 3 | NA |
| 185 | 272.34 | precipitation | 0.1 | 4320 | > th | dose independent | sin | 3 | NA |
| 207 | 272.54 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 13 | 4 |
| 208 | 272.54 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 13 | 4 |
| 209 | 272.54 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 7 | 10 |
| 215 | 272.56 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 12 | 5 |
| 225 | 272.61 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 3 | 17 |
| 226 | 272.61 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 9 | 8 |
| 227 | 272.61 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 3 | 17 |
| 228 | 272.62 | wind | 1.0 | 4320 | > th | dose independent | rect. | 17 | 3 |
| 232 | 272.64 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 3 | 17 |
| 253 | 272.82 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 9 | 8 |
| 273 | 273.02 | wind | 3.0 | 43200 | < th | dose independent | rect. | 5 | 2 |
| 280 | 273.05 | humidity | 80.0 | 14400 | > th | dose independent | rect. | 10 | 1 |
| 288 | 273.14 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 9 | 8 |
| 290 | 273.14 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 9 | 8 |
| 303 | 273.23 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 7 | 10 |
| 316 | 273.38 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 7 | 10 |
| 317 | 273.38 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 7 | 10 |
| 318 | 273.39 | humidity | 80.0 | 14400 | < th | dose independent | rect. | 10 | 1 |
| 327 | 273.47 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 9 | 1 |
| 331 | 273.48 | precipitation | 0.1 | 4320 | > th | dose dependent | sin | 4 | NA |
| 363 | 273.66 | humidity | 80.0 | 14400 | < th | dose independent | rect. | 9 | 3 |
| 366 | 273.69 | wind | 9.0 | 14400 | > th | dose independent | rect. | 10 | 1 |
| 370 | 273.71 | wind | 3.0 | 43200 | > th | dose independent | rect. | 5 | 2 |
| 396 | 273.83 | humidity | 70.0 | 1440 | > th | dose dependent | rect. | 11 | 1 |
| 417 | 274.11 | precipitation | 0.1 | 14400 | > th | dose independent | sin | 1 | NA |
| 418 | 274.11 | precipitation | 0.1 | 14400 | < th | dose independent | sin | 1 | NA |
| 419 | 274.11 | precipitation | 0.1 | 14400 | < th | dose dependent | sin | 1 | NA |
| 449 | 274.34 | wind | 1.0 | 43200 | > th | dose dependent | rect. | 5 | 2 |
| 452 | 274.35 | wind | 1.0 | 1440 | < th | dose dependent | rect. | 13 | 3 |
| 454 | 274.38 | wind | 9.0 | 14400 | > th | dose independent | rect. | 7 | 4 |
| 464 | 274.46 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 9 | 11 |
| 467 | 274.48 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 9 | 11 |
| 468 | 274.48 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 9 | 11 |
| 469 | 274.49 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 12 | 8 |
| 470 | 274.52 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 12 | 8 |
| 471 | 274.52 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 12 | 8 |
| 483 | 274.61 | wind | 1.0 | 1440 | < th | dose dependent | rect. | 13 | 1 |
| 499 | 274.70 | precipitation | 0.1 | 4320 | > th | dose dependent | rect. | 1 | 9 |
| 524 | 274.85 | precipitation | 0.1 | 4320 | > th | dose dependent | rect. | 18 | 23 |
| 542 | 274.95 | humidity | 70.0 | 14400 | > th | dose dependent | rect. | 11 | 1 |
| 576 | 275.13 | wind | 3.0 | 14400 | < th | dose independent | rect. | 24 | 1 |
| 652 | 275.52 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 7 | 3 |
| 663 | 275.58 | wind | 1.0 | 14400 | > th | dose dependent | rect. | 24 | 12 |
| 674 | 275.65 | wind | 1.0 | 1440 | < th | dose independent | rect. | 12 | 7 |
| 712 | 275.87 | precipitation | 0.1 | 4320 | < th | dose independent | rect. | 1 | 9 |
| 714 | 275.87 | precipitation | 0.1 | 4320 | < th | dose dependent | rect. | 1 | 9 |
| 727 | 275.96 | humidity | 80.0 | 14400 | > th | dose independent | rect. | 9 | 6 |
| 752 | 276.04 | precipitation | 0.1 | 4320 | > th | dose independent | rect. | 1 | 9 |
| 760 | 276.07 | wind | 1.0 | 1440 | < th | dose independent | rect. | 13 | 2 |
| 796 | 276.19 | humidity | 80.0 | 14400 | < th | dose dependent | rect. | 11 | 1 |
| 800 | 276.19 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 24 | 20 |
| 807 | 276.20 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 3 | 17 |
| 818 | 276.24 | precipitation | 0.1 | 4320 | < th | dose independent | rect. | 7 | 2 |
| 824 | 276.24 | precipitation | 0.1 | 4320 | < th | dose dependent | rect. | 7 | 2 |
| 834 | 276.25 | wind | 9.0 | 14400 | < th | dose dependent | rect. | 24 | 12 |
| 850 | 276.30 | wind | 1.0 | 1440 | < th | dose independent | rect. | 9 | 10 |
| 893 | 276.40 | wind | 1.0 | 1440 | < th | dose dependent | rect. | 12 | 7 |
| 942 | 276.49 | wind | 1.0 | 4320 | < th | dose independent | rect. | 18 | 2 |
| 956 | 276.53 | precipitation | 0.1 | 4320 | > th | dose dependent | rect. | 18 | 15 |