Os07g0196700
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os07g0196700 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = precipitation,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 232.88 | 0.717 | 2.91 | 0.0486 | 0.039 | 10.3 | -0.442 | -36.2 | -0.0877 | 6.57 | 0.04415 | 10 | -- | -- |
| 241.42 | 0.729 | 2.87 | 0.104 | 0.0803 | -0.208 | -0.581 | -- | -0.108 | 5.28 | 0.04415 | 10 | -- | -- |
| 233.35 | 0.711 | 2.91 | 0.0426 | 0.0405 | 10.3 | -- | -36.4 | -0.086 | 8.2 | 0.04159 | 9 | -- | -- |
| 240.6 | 0.722 | 2.87 | 0.165 | 0.0834 | -0.519 | -- | -- | -0.104 | 6.41 | -1.994 | 604 | -- | -- |
| 233.44 | 0.712 | 2.91 | 0.0414 | -- | 10.5 | -- | -37 | -0.0851 | -- | 0.05249 | 9 | -- | -- |
| 241.47 | 0.728 | 2.87 | 0.102 | 0.0784 | -- | -0.592 | -- | -0.108 | 5.27 | -- | -- | -- | -- |
| 242.29 | 0.729 | 2.87 | 0.102 | 0.0811 | -- | -- | -- | -0.105 | 6.66 | -- | -- | -- | -- |
| 240.87 | 0.723 | 2.87 | 0.163 | -- | -0.544 | -- | -- | -0.117 | -- | -1.611 | 609 | -- | -- |
| 241.21 | 0.723 | 2.88 | -- | 0.0694 | -0.465 | -- | -- | -0.131 | 5.86 | -0.9173 | 604 | -- | -- |
| 242.63 | 0.728 | 2.87 | 0.104 | -- | -- | -- | -- | -0.103 | -- | -- | -- | -- | -- |
| 242.56 | 0.729 | 2.87 | -- | 0.0824 | -- | -- | -- | -0.116 | 6.59 | -- | -- | -- | -- |
| 241.53 | 0.724 | 2.88 | -- | -- | -0.471 | -- | -- | -0.132 | -- | -0.6943 | 604 | -- | -- |
| 242.92 | 0.727 | 2.87 | -- | -- | -- | -- | -- | -0.115 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 225.45 | wind | 9.0 | 30 | > th | dose independent | rect. | 1 | 10 |
| 5 | 225.45 | wind | 9.0 | 30 | > th | dose dependent | rect. | 1 | 10 |
| 9 | 225.47 | wind | 9.0 | 10 | > th | dose independent | rect. | 19 | 16 |
| 10 | 225.47 | wind | 9.0 | 10 | > th | dose dependent | rect. | 19 | 16 |
| 11 | 225.49 | wind | 5.0 | 10 | > th | dose independent | rect. | 10 | 1 |
| 15 | 225.49 | humidity | 60.0 | 10 | < th | dose independent | rect. | 10 | 1 |
| 18 | 225.49 | wind | 5.0 | 10 | > th | dose dependent | rect. | 10 | 1 |
| 22 | 225.49 | humidity | 60.0 | 10 | < th | dose dependent | rect. | 10 | 1 |
| 116 | 226.48 | radiation | 40.0 | 10 | > th | dose dependent | rect. | 10 | 1 |
| 179 | 227.48 | temperature | 20.0 | 10 | < th | dose dependent | rect. | 3 | 1 |
| 292 | 228.82 | precipitation | 0.1 | 10 | > th | dose independent | rect. | 22 | 6 |
| 294 | 228.82 | precipitation | 0.1 | 10 | > th | dose dependent | rect. | 22 | 6 |
| 314 | 229.00 | precipitation | 0.1 | 10 | > th | dose independent | rect. | 1 | 3 |
| 318 | 229.00 | precipitation | 0.1 | 10 | > th | dose dependent | rect. | 1 | 3 |
| 424 | 231.33 | wind | 1.0 | 10 | < th | dose dependent | rect. | 3 | 2 |
| 437 | 231.63 | temperature | 30.0 | 30 | > th | dose independent | rect. | 18 | 17 |
| 438 | 231.64 | precipitation | 0.1 | 10 | > th | dose dependent | sin | 11 | NA |
| 439 | 231.65 | precipitation | 0.1 | 10 | > th | dose independent | sin | 11 | NA |
| 443 | 231.73 | precipitation | 0.1 | 10 | < th | dose independent | sin | 10 | NA |
| 444 | 231.73 | precipitation | 0.1 | 10 | < th | dose dependent | sin | 10 | NA |
| 463 | 232.03 | wind | 3.0 | 720 | < th | dose independent | rect. | 22 | 1 |
| 481 | 232.18 | temperature | 30.0 | 30 | > th | dose independent | rect. | 13 | 6 |
| 506 | 232.26 | humidity | 70.0 | 10 | < th | dose independent | rect. | 15 | 19 |
| 508 | 232.27 | precipitation | 0.1 | 10 | > th | dose independent | rect. | 22 | 10 |
| 523 | 232.29 | precipitation | 0.1 | 10 | > th | dose dependent | rect. | 22 | 10 |
| 549 | 232.40 | atmosphere | 1005.0 | 90 | < th | dose independent | rect. | 24 | 5 |
| 570 | 232.48 | precipitation | 0.1 | 10 | > th | dose independent | rect. | 1 | 7 |
| 598 | 232.50 | precipitation | 0.1 | 10 | > th | dose dependent | rect. | 1 | 7 |
| 623 | 232.54 | wind | 3.0 | 10 | < th | dose dependent | rect. | 18 | 1 |
| 627 | 232.59 | humidity | 50.0 | 90 | < th | dose independent | rect. | 15 | 3 |
| 648 | 232.62 | atmosphere | 1005.0 | 270 | < th | dose independent | rect. | 1 | 1 |
| 649 | 232.62 | temperature | 20.0 | 10 | < th | dose dependent | rect. | 3 | 9 |
| 683 | 232.65 | humidity | 50.0 | 90 | < th | dose dependent | rect. | 15 | 3 |
| 739 | 232.67 | humidity | 50.0 | 10 | < th | dose dependent | rect. | 15 | 2 |
| 753 | 232.69 | humidity | 90.0 | 270 | > th | dose independent | rect. | 24 | 1 |
| 754 | 232.69 | humidity | 50.0 | 90 | < th | dose independent | rect. | 15 | 1 |
| 755 | 232.69 | humidity | 70.0 | 10 | < th | dose independent | rect. | 12 | 22 |
| 756 | 232.70 | wind | 1.0 | 10 | < th | dose independent | rect. | 14 | 2 |
| 759 | 232.70 | wind | 1.0 | 10 | < th | dose dependent | rect. | 14 | 2 |
| 765 | 232.71 | humidity | 50.0 | 10 | < th | dose independent | rect. | 15 | 1 |
| 769 | 232.71 | atmosphere | 1005.0 | 30 | < th | dose independent | rect. | 1 | 3 |
| 845 | 232.75 | precipitation | 0.1 | 90 | > th | dose independent | rect. | 1 | 2 |
| 847 | 232.75 | precipitation | 0.1 | 90 | > th | dose dependent | rect. | 1 | 2 |
| 851 | 232.76 | temperature | 30.0 | 30 | > th | dose independent | rect. | 13 | 3 |
| 901 | 232.80 | precipitation | 0.1 | 10 | > th | dose independent | rect. | 1 | 1 |
| 913 | 232.80 | precipitation | 0.1 | 10 | > th | dose dependent | rect. | 1 | 1 |
| 988 | 233.16 | humidity | 50.0 | 90 | < th | dose dependent | sin | 12 | NA |