Os07g0195200
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to ZG10 (Fragment).
FiT-DB / Search/ Help/ Sample detail
|
Os07g0195200 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
|
Description : Similar to ZG10 (Fragment).
|
|
log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
|
_____ |
|
__
Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 39.73 | 0.296 | 8.99 | -1.02 | 0.738 | 0.725 | 0.268 | -0.328 | -0.287 | 5.88 | 23.07 | 2140 | -- | -- |
| 39.78 | 0.294 | 8.98 | -0.927 | 0.732 | 0.696 | 0.274 | -- | -0.264 | 5.89 | 22.98 | 2150 | -- | -- |
| 39.9 | 0.294 | 8.99 | -1.04 | 0.738 | 0.734 | -- | -0.417 | -0.293 | 5.89 | 23.2 | 2150 | -- | -- |
| 39.97 | 0.294 | 8.98 | -0.925 | 0.734 | 0.696 | -- | -- | -0.264 | 5.87 | 23 | 2152 | -- | -- |
| 60.6 | 0.363 | 8.99 | -0.924 | -- | 0.679 | -- | 0.034 | -0.232 | -- | 23.36 | 2742 | -- | -- |
| 54.38 | 0.346 | 8.96 | -0.693 | 0.676 | -- | 0.263 | -- | -0.134 | 5.32 | -- | -- | -- | -- |
| 54.55 | 0.346 | 8.96 | -0.693 | 0.678 | -- | -- | -- | -0.135 | 5.32 | -- | -- | -- | -- |
| 60.6 | 0.363 | 8.99 | -0.927 | -- | 0.683 | -- | -- | -0.234 | -- | 23.4 | 2741 | -- | -- |
| 60.44 | 0.362 | 8.94 | -- | 0.735 | 0.467 | -- | -- | -0.0933 | 5.66 | 25.22 | 2104 | -- | -- |
| 78.53 | 0.414 | 8.96 | -0.669 | -- | -- | -- | -- | -0.118 | -- | -- | -- | -- | -- |
| 67.19 | 0.383 | 8.94 | -- | 0.666 | -- | -- | -- | -0.0578 | 5.36 | -- | -- | -- | -- |
| 80.51 | 0.418 | 8.93 | -- | -- | 0.426 | -- | -- | 0.0424 | -- | 29.91 | 5555 | -- | -- |
| 90.34 | 0.444 | 8.95 | -- | -- | -- | -- | -- | -0.0438 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
|
Histogram 
|
Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 39.18 | wind | 5 | 43200 | > th | dose independent | rect. | 20 | 1 |
| 2 | 39.26 | wind | 5 | 43200 | < th | dose independent | rect. | 20 | 1 |
| 3 | 39.37 | temperature | 20 | 1440 | > th | dose dependent | rect. | 16 | 1 |
| 6 | 39.63 | wind | 5 | 43200 | > th | dose dependent | rect. | 19 | 3 |
| 7 | 39.66 | wind | 5 | 43200 | > th | dose independent | rect. | 19 | 6 |
| 10 | 39.68 | temperature | 20 | 1440 | > th | dose dependent | rect. | 13 | 6 |
| 13 | 39.70 | temperature | 25 | 720 | > th | dose dependent | rect. | 18 | 15 |
| 17 | 39.76 | wind | 5 | 43200 | > th | dose independent | rect. | 17 | 21 |
| 21 | 39.77 | temperature | 20 | 1440 | > th | dose dependent | rect. | 13 | 4 |
| 27 | 39.80 | wind | 5 | 43200 | < th | dose independent | rect. | 19 | 6 |
| 57 | 39.90 | wind | 5 | 43200 | < th | dose independent | rect. | 17 | 21 |
| 61 | 39.91 | wind | 5 | 43200 | < th | dose independent | rect. | 19 | 20 |
| 91 | 39.97 | temperature | 25 | 1440 | > th | dose dependent | rect. | 13 | 20 |
| 94 | 39.99 | temperature | 20 | 1440 | > th | dose dependent | rect. | 13 | 1 |
| 158 | 40.09 | temperature | 25 | 1440 | > th | dose dependent | sin | 14 | NA |
| 203 | 40.15 | temperature | 20 | 1440 | > th | dose dependent | sin | 18 | NA |
| 221 | 40.17 | wind | 7 | 43200 | > th | dose independent | rect. | 17 | 13 |
| 223 | 40.17 | temperature | 25 | 1440 | > th | dose dependent | rect. | 18 | 1 |
| 230 | 40.18 | wind | 5 | 43200 | > th | dose independent | sin | 12 | NA |
| 231 | 40.18 | wind | 7 | 43200 | < th | dose independent | rect. | 17 | 13 |
| 237 | 40.18 | wind | 5 | 43200 | > th | dose dependent | rect. | 17 | 13 |
| 257 | 40.20 | wind | 7 | 43200 | < th | dose independent | rect. | 17 | 5 |
| 272 | 40.21 | temperature | 10 | 1440 | > th | dose dependent | rect. | 18 | 1 |
| 294 | 40.22 | temperature | 25 | 1440 | > th | dose dependent | rect. | 18 | 23 |
| 313 | 40.24 | temperature | 25 | 1440 | > th | dose dependent | no | NA | NA |
| 316 | 40.24 | wind | 5 | 43200 | > th | dose dependent | rect. | 19 | 6 |
| 326 | 40.24 | temperature | 25 | 1440 | > th | dose dependent | rect. | 7 | 21 |
| 339 | 40.25 | temperature | 25 | 1440 | > th | dose dependent | rect. | 2 | 23 |
| 361 | 40.26 | temperature | 25 | 1440 | > th | dose dependent | rect. | 16 | 23 |
| 363 | 40.27 | wind | 9 | 43200 | < th | dose independent | rect. | 19 | 4 |
| 384 | 40.28 | wind | 7 | 43200 | > th | dose independent | rect. | 17 | 5 |
| 453 | 40.33 | temperature | 10 | 1440 | > th | dose dependent | sin | 19 | NA |
| 481 | 40.35 | wind | 5 | 43200 | < th | dose independent | sin | 11 | NA |
| 566 | 40.42 | wind | 5 | 43200 | > th | dose independent | rect. | 23 | 16 |
| 697 | 40.51 | wind | 5 | 43200 | > th | dose dependent | rect. | 18 | 21 |
| 869 | 40.62 | temperature | 10 | 1440 | > th | dose dependent | rect. | 5 | 16 |
| 877 | 40.63 | wind | 5 | 43200 | > th | dose independent | rect. | 2 | 13 |
| 879 | 40.63 | wind | 5 | 43200 | > th | dose dependent | sin | 12 | NA |
| 899 | 40.64 | radiation | 20 | 1440 | < th | dose independent | rect. | 16 | 3 |
| 904 | 40.64 | temperature | 30 | 1440 | < th | dose dependent | rect. | 18 | 1 |
| 944 | 40.66 | wind | 9 | 43200 | < th | dose independent | rect. | 19 | 11 |
| 967 | 40.67 | wind | 7 | 43200 | < th | dose independent | rect. | 17 | 9 |
| 968 | 40.67 | radiation | 20 | 1440 | < th | dose independent | rect. | 16 | 13 |
| 970 | 40.67 | temperature | 20 | 4320 | > th | dose dependent | rect. | 4 | 2 |
| 972 | 40.67 | temperature | 20 | 4320 | > th | dose dependent | rect. | 3 | 4 |