Os07g0194300
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os07g0194300 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = sin)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 451.69 | 0.999 | 5.36 | -4.58 | 0.361 | 3.5 | -1.61 | -2.72 | -0.696 | 22.3 | 21.59 | 1132 | 11.2 | -- |
| 457.83 | 0.997 | 5.35 | -4.01 | 0.375 | 3.51 | -1.74 | -- | -0.631 | 22 | 20.94 | 1164 | 11.4 | -- |
| 461.2 | 1 | 5.38 | -4.71 | 0.326 | 3.59 | -- | -3.47 | -0.739 | 21.7 | 21.24 | 1123 | 11.3 | -- |
| 468.25 | 1.01 | 5.29 | -3.87 | 0.462 | 3.41 | -- | -- | -0.539 | 21.9 | 20.55 | 1153 | 11.1 | -- |
| 463.3 | 1 | 5.37 | -4.74 | -- | 3.71 | -- | -3.65 | -0.716 | -- | 21.02 | 1095 | 12.1 | -- |
| 755.16 | 1.29 | 5.16 | -2.94 | 1.21 | -- | -1.15 | -- | 0.0488 | 1.4 | -- | -- | -- | -- |
| 760.38 | 1.29 | 5.15 | -2.9 | 1.21 | -- | -- | -- | 0.0542 | 1.58 | -- | -- | -- | -- |
| 472.78 | 1.01 | 5.26 | -3.9 | -- | 3.56 | -- | -- | -0.498 | -- | 20.24 | 1111 | 12.3 | -- |
| 819.43 | 1.33 | 5.17 | -- | 0.619 | 2.56 | -- | -- | -0.00313 | 21.8 | 21.9 | 944 | 7.99 | -- |
| 850.58 | 1.36 | 5.14 | -2.85 | -- | -- | -- | -- | 0.0808 | -- | -- | -- | -- | -- |
| 982.01 | 1.47 | 5.08 | -- | 1.16 | -- | -- | -- | 0.377 | 1.5 | -- | -- | -- | -- |
| 828.84 | 1.34 | 5.15 | -- | -- | 2.67 | -- | -- | 0.0317 | -- | 21.73 | 896 | 9.43 | -- |
| 1065 | 1.52 | 5.06 | -- | -- | -- | -- | -- | 0.397 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 464.03 | temperature | 20 | 720 | > th | dose dependent | rect. | 15 | 18 |
| 4 | 466.94 | temperature | 20 | 1440 | > th | dose dependent | rect. | 16 | 6 |
| 32 | 472.35 | temperature | 20 | 1440 | > th | dose dependent | sin | 16 | NA |
| 69 | 474.92 | temperature | 20 | 1440 | > th | dose dependent | rect. | 11 | 17 |
| 80 | 475.07 | temperature | 20 | 1440 | > th | dose dependent | rect. | 11 | 20 |
| 101 | 475.78 | temperature | 10 | 1440 | > th | dose dependent | rect. | 16 | 5 |
| 119 | 476.17 | temperature | 10 | 1440 | > th | dose dependent | rect. | 17 | 2 |
| 162 | 477.51 | temperature | 20 | 1440 | > th | dose dependent | rect. | 2 | 21 |
| 185 | 477.83 | temperature | 20 | 1440 | > th | dose dependent | rect. | 6 | 23 |
| 192 | 477.97 | temperature | 20 | 1440 | > th | dose dependent | no | NA | NA |
| 231 | 478.62 | temperature | 20 | 1440 | > th | dose dependent | rect. | 21 | 23 |
| 412 | 482.52 | temperature | 30 | 1440 | < th | dose dependent | rect. | 18 | 1 |
| 423 | 482.69 | temperature | 10 | 1440 | > th | dose dependent | rect. | 4 | 19 |
| 670 | 484.59 | temperature | 30 | 1440 | < th | dose dependent | rect. | 17 | 5 |