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Os07g0192900

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Conserved hypothetical protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 9.73 (0.0172) R2 : 0.0114
β1 : -- (--) R2dD : -- R2D : --
β2 : -- (--) R2dC : -- R2C : --
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.0829 (0.0362) R2dN8 : 0.0147 R2N8 : 0.0114
σ : 0.323
deviance : 48.02
__
_____
C
peak time of C : --
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = temperature, response mode = > th, dose dependency = dose dependent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
27.25 0.245 9.6 1.42 0.352 -0.334 -0.355 3.17 0.415 6.75 21.61 1655 -- --
34.47 0.273 9.7 0.587 0.381 -0.206 -0.32 -- 0.216 6.52 17.23 15395 -- --
27.52 0.244 9.6 1.42 0.346 -0.339 -- 3.24 0.415 6.85 21.71 1720 -- --
34.51 0.274 9.68 0.656 0.387 -0.302 -- -- 0.253 6.89 12.57 17020 -- --
33.18 0.268 9.58 1.63 -- -0.506 -- 4.1 0.485 -- 22.93 1859 -- --
35.38 0.279 9.72 0.426 0.377 -- -0.417 -- 0.122 6.72 -- -- -- --
35.81 0.28 9.71 0.42 0.375 -- -- -- 0.123 6.85 -- -- -- --
41.78 0.301 9.69 0.663 -- -0.308 -- -- 0.257 -- 10.3 16525 -- --
37.79 0.286 9.74 -- 0.376 0.263 -- -- -0.00212 6.89 -26.76 47520 -- --
43.18 0.307 9.72 0.428 -- -- -- -- 0.13 -- -- -- -- --
40.46 0.298 9.72 -- 0.38 -- -- -- 0.0764 6.79 -- -- -- --
45.21 0.313 9.75 -- -- 0.269 -- -- 0.00224 -- 3.084 47520 -- --
48.02 0.323 9.73 -- -- -- -- -- 0.0829 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 26.94 temperature 20.0 1440 > th dose dependent rect. 15 15
2 26.95 wind 1.0 43200 > th dose independent rect. 19 1
8 27.02 wind 3.0 43200 < th dose dependent rect. 11 1
15 27.09 wind 1.0 43200 < th dose independent rect. 19 1
16 27.10 temperature 20.0 1440 > th dose dependent sin 14 NA
23 27.15 wind 1.0 43200 < th dose independent rect. 19 7
46 27.31 radiation 1.0 1440 < th dose dependent rect. 18 8
52 27.33 radiation 1.0 4320 > th dose independent rect. 17 2
53 27.33 wind 1.0 43200 < th dose independent rect. 19 3
63 27.33 radiation 1.0 1440 < th dose dependent rect. 18 5
69 27.34 radiation 1.0 1440 < th dose dependent rect. 18 3
85 27.39 wind 1.0 43200 < th dose dependent rect. 21 1
90 27.40 wind 1.0 43200 > th dose independent rect. 19 7
103 27.47 temperature 25.0 1440 < th dose independent rect. 15 9
117 27.50 temperature 25.0 1440 > th dose dependent rect. 16 1
118 27.50 temperature 20.0 1440 > th dose dependent rect. 20 2
131 27.54 radiation 1.0 4320 < th dose dependent rect. 17 13
137 27.57 wind 1.0 43200 < th dose dependent rect. 19 3
142 27.59 radiation 1.0 4320 < th dose independent rect. 17 4
143 27.59 wind 1.0 43200 < th dose independent rect. 21 5
146 27.59 radiation 1.0 4320 < th dose independent rect. 17 8
155 27.60 radiation 1.0 4320 < th dose independent rect. 17 2
157 27.60 wind 1.0 43200 > th dose independent rect. 21 5
166 27.64 wind 3.0 43200 < th dose independent rect. 12 1
167 27.64 wind 1.0 43200 > th dose independent rect. 23 3
168 27.64 temperature 25.0 1440 > th dose independent rect. 15 9
179 27.67 wind 1.0 43200 < th dose independent rect. 21 1
196 27.71 humidity 80.0 14400 > th dose independent rect. 3 1
200 27.73 temperature 25.0 1440 < th dose independent rect. 15 12
204 27.74 humidity 90.0 43200 < th dose independent rect. 20 1
205 27.74 humidity 90.0 14400 > th dose independent rect. 23 5
220 27.78 temperature 25.0 1440 < th dose independent sin 16 NA
277 27.91 temperature 25.0 1440 < th dose independent rect. 15 15
288 27.92 precipitation 0.1 43200 > th dose dependent rect. 19 1
293 27.93 radiation 1.0 43200 < th dose independent rect. 18 5
295 27.93 radiation 1.0 43200 < th dose independent rect. 18 7
302 27.94 radiation 1.0 43200 < th dose independent rect. 18 1
309 27.95 wind 1.0 43200 > th dose independent rect. 11 1
324 27.98 wind 3.0 43200 < th dose independent rect. 11 3
335 27.99 wind 1.0 43200 > th dose independent rect. 24 1
336 27.99 wind 1.0 43200 < th dose independent rect. 7 1
339 27.99 temperature 20.0 1440 > th dose dependent rect. 4 1
341 28.00 wind 1.0 43200 < th dose dependent rect. 15 11
343 28.01 temperature 25.0 1440 < th dose independent rect. 16 3
351 28.03 temperature 25.0 1440 > th dose independent sin 16 NA
361 28.04 humidity 90.0 14400 > th dose dependent rect. 1 1
363 28.04 humidity 90.0 14400 > th dose dependent rect. 24 3
371 28.05 temperature 20.0 1440 > th dose dependent no NA NA
379 28.06 humidity 90.0 14400 < th dose independent rect. 23 5
383 28.06 temperature 25.0 1440 < th dose independent rect. 9 18
400 28.07 wind 1.0 43200 < th dose independent rect. 24 1
403 28.07 temperature 25.0 1440 < th dose independent rect. 9 21
415 28.08 temperature 20.0 1440 > th dose dependent rect. 2 3
425 28.08 temperature 20.0 1440 > th dose dependent rect. 20 23
431 28.09 wind 1.0 43200 < th dose dependent rect. 19 7
443 28.10 temperature 20.0 1440 > th dose dependent rect. 1 23
445 28.11 wind 1.0 43200 > th dose independent rect. 21 1
446 28.11 temperature 25.0 1440 > th dose independent rect. 16 3
460 28.12 wind 1.0 43200 > th dose independent rect. 9 3
461 28.12 wind 1.0 43200 < th dose independent rect. 23 3
472 28.12 temperature 25.0 1440 < th dose independent rect. 15 22
478 28.12 temperature 20.0 1440 > th dose dependent rect. 4 23
490 28.13 wind 1.0 43200 < th dose dependent rect. 11 15
491 28.13 temperature 20.0 720 > th dose dependent rect. 20 20
507 28.14 temperature 25.0 1440 < th dose independent rect. 9 15
520 28.15 radiation 1.0 4320 < th dose dependent sin 13 NA
530 28.16 wind 1.0 43200 > th dose independent rect. 2 1
556 28.18 temperature 25.0 1440 > th dose independent rect. 9 15
570 28.19 wind 1.0 43200 > th dose independent rect. 19 3
621 28.21 atmosphere 1010.0 14400 > th dose dependent rect. 23 4
633 28.22 humidity 90.0 43200 > th dose independent rect. 20 1
641 28.22 atmosphere 1010.0 14400 > th dose dependent rect. 2 1
643 28.22 humidity 90.0 14400 < th dose dependent rect. 3 2
644 28.22 atmosphere 1010.0 14400 > th dose dependent rect. 23 2
659 28.23 precipitation 0.1 43200 > th dose independent rect. 19 1
663 28.23 radiation 1.0 4320 < th dose dependent rect. 5 1
685 28.24 wind 3.0 43200 > th dose dependent rect. 15 2
708 28.25 atmosphere 1010.0 14400 > th dose dependent rect. 9 1
718 28.25 atmosphere 1010.0 14400 > th dose dependent rect. 22 13
727 28.26 temperature 25.0 1440 > th dose independent rect. 15 15
759 28.27 temperature 25.0 1440 < th dose independent rect. 5 22
761 28.27 humidity 90.0 43200 > th dose dependent rect. 5 1
782 28.28 temperature 25.0 1440 > th dose independent rect. 9 21
794 28.28 atmosphere 1010.0 14400 > th dose dependent rect. 1 10
813 28.29 precipitation 0.1 43200 < th dose independent rect. 19 1
821 28.29 atmosphere 1010.0 14400 > th dose dependent sin 7 NA
825 28.29 precipitation 0.1 43200 < th dose dependent rect. 19 1
875 28.31 humidity 80.0 14400 < th dose independent rect. 3 1
876 28.31 atmosphere 1005.0 43200 < th dose independent rect. 9 3
914 28.32 temperature 25.0 1440 < th dose independent rect. 2 22
925 28.33 atmosphere 1005.0 43200 < th dose independent rect. 10 1
959 28.34 temperature 25.0 1440 < th dose independent no NA NA
983 28.35 temperature 25.0 1440 < th dose independent rect. 5 19