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Os07g0187700

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : WD-40 repeat containing protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 12.8 (0.0221) R2 : 0.581
β1 : -1.59 (0.0808) R2dD : 0.368 R2D : 0.267
β2 : 0.798 (0.0527) R2dC : 0.211 R2C : 0.181
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : -0.414 (0.0471) R2dN8 : 0.0952 R2N8 : 0.00893
σ : 0.415
deviance : 78.58
__
_____
C
peak time of C : 22.8
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = temperature, response mode = < th, dose dependency = dose independent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
71.23 0.397 12.7 -0.251 0.824 1.02 0.255 -6.77 -0.404 22.7 30 4850 -- --
77.28 0.413 12.8 -1.64 0.832 -0.189 0.185 -- -0.442 22.9 19.4 34979 -- --
71.49 0.394 12.7 -0.258 0.823 1.01 -- -6.79 -0.404 22.7 30 4900 -- --
73.86 0.4 12.8 -1.45 0.813 0.34 -- -- -0.314 22.9 26.99 7222 -- --
108.37 0.485 12.7 -0.104 -- 0.862 -- -6.3 -0.333 -- 30.2 5835 -- --
78.36 0.415 12.8 -1.58 0.8 -- 0.23 -- -0.414 22.8 -- -- -- --
78.58 0.415 12.8 -1.59 0.798 -- -- -- -0.414 22.8 -- -- -- --
108.47 0.487 12.8 -1.5 -- 0.325 -- -- -0.362 -- 26.99 7222 -- --
83.9 0.427 12.7 -- 0.816 1.21 -- -- 0.0798 22.9 19.03 47520 -- --
118.08 0.508 12.8 -1.57 -- -- -- -- -0.409 -- -- -- -- --
145.09 0.563 12.8 -- 0.786 -- -- -- -0.237 22.7 -- -- -- --
124.94 0.521 12.7 -- -- 1.2 -- -- 0.06 -- 18.65 47520 -- --
183.25 0.632 12.8 -- -- -- -- -- -0.235 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 63.42 humidity 90 14400 < th dose dependent rect. 4 2
2 63.46 humidity 90 14400 < th dose dependent rect. 2 5
3 63.52 humidity 80 14400 < th dose independent rect. 22 5
5 63.68 humidity 80 14400 > th dose independent rect. 22 5
14 63.88 humidity 80 14400 > th dose independent rect. 22 8
21 64.10 humidity 80 14400 < th dose dependent rect. 21 10
22 64.12 humidity 80 14400 < th dose independent rect. 1 2
24 64.15 humidity 80 14400 > th dose independent rect. 1 1
35 64.24 humidity 80 14400 > th dose independent rect. 24 3
41 64.31 humidity 80 14400 < th dose independent rect. 5 1
44 64.35 humidity 80 14400 < th dose independent rect. 24 6
57 64.38 humidity 80 14400 < th dose dependent rect. 21 6
68 64.43 humidity 80 14400 < th dose dependent rect. 22 3
75 64.47 humidity 80 14400 < th dose dependent rect. 24 1
123 64.89 humidity 80 14400 > th dose independent rect. 4 1
153 65.42 wind 9 14400 > th dose dependent rect. 14 1
172 65.84 wind 9 43200 < th dose independent rect. 13 1
180 65.99 wind 9 43200 > th dose independent rect. 13 1
208 66.62 wind 9 14400 < th dose independent rect. 12 3
213 66.70 wind 3 14400 > th dose independent rect. 2 2
218 66.89 wind 9 14400 < th dose independent rect. 3 12
219 66.90 humidity 80 1440 < th dose independent rect. 7 2
227 66.97 radiation 40 14400 > th dose independent rect. 15 17
229 67.01 wind 7 14400 > th dose dependent rect. 11 4
230 67.02 wind 3 14400 < th dose independent rect. 2 2
233 67.04 radiation 30 14400 > th dose independent rect. 16 1
250 67.05 wind 9 14400 < th dose independent rect. 23 16
252 67.06 wind 7 14400 > th dose dependent rect. 3 12
262 67.11 radiation 40 14400 > th dose dependent rect. 15 17
264 67.12 wind 9 14400 > th dose independent rect. 4 11
290 67.22 wind 7 14400 > th dose dependent rect. 24 15
302 67.29 radiation 40 14400 > th dose dependent rect. 15 1
331 67.40 wind 1 43200 < th dose independent rect. 18 10
334 67.41 wind 1 43200 < th dose dependent rect. 18 10
357 67.43 wind 9 14400 > th dose independent rect. 20 19
366 67.49 humidity 80 1440 > th dose independent rect. 7 1
396 67.67 wind 1 43200 < th dose dependent rect. 9 2
397 67.69 wind 1 43200 > th dose independent rect. 9 3
441 67.91 wind 1 43200 < th dose independent rect. 20 7
456 68.00 wind 1 43200 > th dose independent rect. 18 10
463 68.06 wind 7 14400 > th dose dependent sin 4 NA
470 68.09 wind 1 43200 < th dose independent rect. 9 3
498 68.23 radiation 1 14400 > th dose independent rect. 8 2
499 68.23 wind 9 14400 < th dose independent rect. 18 21
515 68.31 radiation 1 14400 < th dose independent rect. 8 2
523 68.34 radiation 1 14400 < th dose independent rect. 8 5
528 68.37 wind 9 14400 > th dose independent sin 2 NA
533 68.38 humidity 60 43200 < th dose dependent rect. 18 2
537 68.40 wind 9 14400 < th dose independent sin 3 NA
541 68.41 wind 1 43200 < th dose independent rect. 20 3
542 68.41 radiation 1 14400 > th dose independent rect. 8 5
552 68.43 wind 1 43200 < th dose dependent rect. 22 3
568 68.45 radiation 30 43200 < th dose dependent rect. 1 5
570 68.46 radiation 1 14400 < th dose dependent rect. 9 1
582 68.47 radiation 20 43200 < th dose dependent rect. 4 2
597 68.48 radiation 20 43200 < th dose dependent rect. 21 9
603 68.48 radiation 20 43200 < th dose dependent rect. 19 11
629 68.52 wind 1 14400 > th dose dependent rect. 2 2
649 68.59 temperature 15 43200 < th dose independent rect. 10 4
656 68.60 temperature 15 43200 > th dose independent rect. 10 6
661 68.61 temperature 15 43200 > th dose independent rect. 11 3
696 68.66 wind 9 14400 > th dose dependent rect. 18 21
704 68.69 humidity 80 1440 < th dose independent rect. 6 8
715 68.71 temperature 15 43200 < th dose independent rect. 8 6
726 68.72 wind 1 43200 < th dose dependent rect. 20 7
738 68.74 wind 1 43200 < th dose dependent rect. 22 5
803 68.82 temperature 15 43200 < th dose independent rect. 10 1
835 68.84 radiation 40 43200 < th dose independent rect. 16 11
838 68.85 temperature 15 43200 > th dose independent rect. 10 1
846 68.85 wind 1 43200 < th dose dependent rect. 7 1
847 68.85 radiation 30 43200 > th dose dependent rect. 7 2
858 68.85 radiation 1 43200 > th dose dependent rect. 17 13
886 68.89 radiation 10 14400 < th dose independent rect. 18 2
893 68.89 humidity 90 43200 > th dose dependent rect. 24 1
903 68.91 radiation 10 14400 < th dose independent rect. 18 4
929 68.93 humidity 90 43200 > th dose dependent rect. 24 3
952 68.95 radiation 10 43200 < th dose independent rect. 16 15
955 68.95 radiation 1 43200 > th dose dependent rect. 4 2
977 68.98 temperature 15 43200 < th dose independent sin 22 NA
985 68.98 radiation 10 43200 < th dose dependent rect. 18 13