Os07g0186200 - FiT-DB

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Notice!
This gene did NOT pass the analysis criteria (log2(expression) > 5 in more than 80% of samples & normality of residuals was not rejected).
The modeling results may be unreliable.

Os07g0186200

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Curculin-like (mannose-binding) lectin domain containing protein.

log2(Expression) ~ Norm(μ, σ²)

μ = α + β₁D + β₂C + β₃E + β₄D*C + β₅D*E + γ₁N8

par.		value	(S.E.)
α	:	5.58	(0.0606)	R²	:	0.356
β₁	:	-0.835	(0.237)	R²_dD	:	0.0221	R²_D	:	0.0574
β₂	:	1.1	(0.152)	R²_dC	:	0.0747	R²_C	:	0.0899
β₃	:	2.79	(0.26)	R²_dE	:	0.19	R²_E	:	0.26
β₄	:	--	(--)	R²_dD*C	:	--	R²_D*C	:	--
β₅	:	--	(--)	R²_dD*E	:	--	R²_D*E	:	--
γ₁	:	-0.189	(0.135)	R²_dN8	:	0.00522	R²_N8	:	0.0121
σ	:	1.12
deviance	:	578.09
__

_____

C
peak time of C	:	3.6
E
wheather	:	wind
threshold	:	7.114
memory length	:	3583
response mode	:	> th
dose dependency	:	dose independent
G
type of G	:	rect.
peak or start time of G	:	17.3
open length of G	:	2.05

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = wind, response mode = > th, dose dependency = dose independent, type of G = rect.)

deviance	σ	α	β₁	β₂	β₃	β₄	β₅	γ₁	peak time of C	threshold	memory length	peak or start time of G	open length of G
576.16	1.13	5.63	-0.839	1.11	3.03	-0.602	1.75	-0.252	3.58	7.192	3586	17.3	2.11
579.21	1.12	5.61	-0.778	1.13	2.89	-0.473	--	-0.24	3.63	7.119	3583	17.3	2.17
577.25	1.12	5.63	-0.823	1.1	3.03	--	1.63	-0.244	3.61	7.2	3583	17.3	2.12
578.09	1.12	5.58	-0.835	1.1	2.79	--	--	-0.189	3.6	7.114	3583	17.3	2.05
643.9	1.18	5.63	-0.702	--	3.32	--	1.99	-0.185	--	7.14	3719	17.3	2.13
703.44	1.24	5.71	-1.85	1.26	--	-1.32	--	-0.693	3.17	--	--	--	--
709.12	1.25	5.7	-1.82	1.26	--	--	--	-0.685	3.21	--	--	--	--
645.03	1.18	5.6	-0.799	--	2.85	--	--	-0.193	--	7.105	3583	17.3	2.06
596.37	1.14	5.58	--	1.07	3.04	--	--	-0.115	3.52	7.102	3586	17.3	1.98
799.13	1.32	5.7	-1.77	--	--	--	--	-0.652	--	--	--	--	--
796.41	1.32	5.66	--	1.22	--	--	--	-0.482	3.2	--	--	--	--
657.19	1.19	5.57	--	--	3.17	--	--	-0.0475	--	6.9	3789	17.4	1.92
881.43	1.39	5.66	--	--	--	--	--	-0.456	--	--	--	--	--

Results of the grid search

Summarized heatmap of deviance

Histogram

Local optima within top1000 grid-points

rank	deviance	wheather	threshold	memory length	response mode	dose dependency	type of G	peak or start time of G	open length of G
1	590.43	wind	7.0	4320	> th	dose independent	rect.	17	2
3	592.83	wind	7.0	4320	< th	dose independent	rect.	17	3
4	592.96	wind	7.0	4320	< th	dose independent	rect.	18	1
7	595.24	wind	7.0	4320	> th	dose dependent	rect.	17	2
17	598.31	wind	3.0	14400	< th	dose dependent	rect.	1	1
34	602.59	radiation	20.0	1440	< th	dose independent	rect.	11	2
57	606.70	radiation	10.0	1440	< th	dose independent	rect.	13	2
58	607.07	radiation	10.0	4320	< th	dose dependent	rect.	24	5
61	607.54	wind	1.0	14400	> th	dose independent	rect.	1	1
73	608.91	temperature	20.0	90	> th	dose independent	sin	11	NA
80	609.64	radiation	20.0	1440	< th	dose dependent	rect.	11	2
87	610.58	temperature	20.0	90	< th	dose independent	sin	10	NA
90	611.01	radiation	10.0	1440	< th	dose independent	rect.	12	6
110	612.20	radiation	10.0	1440	< th	dose independent	rect.	12	11
117	612.34	radiation	10.0	1440	< th	dose independent	rect.	12	15
127	612.73	humidity	90.0	14400	> th	dose independent	rect.	13	1
133	612.99	humidity	80.0	14400	> th	dose dependent	rect.	5	1
154	613.55	temperature	20.0	90	< th	dose independent	rect.	19	14
157	613.68	wind	1.0	43200	< th	dose independent	rect.	12	1
160	613.75	temperature	20.0	90	< th	dose independent	rect.	19	16
192	614.24	wind	1.0	43200	< th	dose dependent	rect.	12	1
201	614.47	temperature	20.0	90	< th	dose independent	rect.	19	12
216	614.87	wind	5.0	4320	< th	dose independent	rect.	24	1
220	615.02	radiation	20.0	1440	< th	dose independent	rect.	11	19
221	615.03	wind	1.0	14400	< th	dose independent	rect.	24	2
238	615.27	temperature	20.0	90	< th	dose independent	rect.	21	12
242	615.48	temperature	20.0	90	< th	dose independent	rect.	21	14
258	615.90	wind	7.0	4320	> th	dose dependent	rect.	15	16
268	616.15	temperature	20.0	90	< th	dose independent	rect.	21	10
320	616.96	wind	1.0	43200	> th	dose independent	rect.	12	1
326	617.06	wind	5.0	4320	> th	dose independent	rect.	24	1
332	617.38	temperature	20.0	720	> th	dose independent	rect.	16	12
338	617.53	wind	1.0	43200	< th	dose independent	rect.	10	3
355	617.72	precipitation	0.1	270	> th	dose independent	rect.	2	2
360	617.93	radiation	10.0	1440	< th	dose independent	sin	18	NA
387	618.23	temperature	20.0	720	> th	dose independent	rect.	10	18
391	618.28	humidity	90.0	720	> th	dose dependent	rect.	20	1
398	618.37	precipitation	0.1	270	> th	dose dependent	rect.	2	2
399	618.38	wind	1.0	43200	< th	dose dependent	rect.	10	3
402	618.44	precipitation	0.1	270	< th	dose independent	sin	11	NA
403	618.44	precipitation	0.1	270	< th	dose dependent	sin	11	NA
404	618.45	wind	7.0	720	> th	dose independent	rect.	16	13
409	618.50	humidity	90.0	14400	> th	dose independent	rect.	21	2
420	618.80	temperature	20.0	720	> th	dose independent	rect.	14	14
422	618.93	temperature	20.0	270	> th	dose independent	rect.	10	22
447	619.15	wind	1.0	43200	< th	dose independent	rect.	2	1
454	619.22	precipitation	0.1	270	> th	dose independent	sin	11	NA
460	619.28	radiation	1.0	1440	< th	dose dependent	rect.	13	1
467	619.46	radiation	1.0	43200	> th	dose dependent	rect.	18	12
468	619.49	temperature	20.0	720	> th	dose independent	rect.	16	10
472	619.53	temperature	20.0	1440	> th	dose independent	rect.	6	1
499	619.89	radiation	10.0	43200	< th	dose dependent	rect.	18	12
504	619.93	temperature	20.0	90	< th	dose independent	rect.	13	22
509	620.00	temperature	20.0	90	< th	dose independent	rect.	15	20
553	620.56	temperature	20.0	270	< th	dose independent	rect.	11	21
558	620.62	radiation	10.0	4320	> th	dose independent	rect.	6	1
565	620.67	precipitation	0.1	270	> th	dose dependent	sin	10	NA
575	620.75	temperature	20.0	1440	< th	dose independent	rect.	6	1
579	620.77	humidity	80.0	14400	> th	dose dependent	rect.	4	3
596	620.97	radiation	10.0	43200	< th	dose independent	rect.	17	1
607	621.07	precipitation	0.1	270	> th	dose independent	rect.	17	12
611	621.12	temperature	20.0	720	< th	dose independent	sin	15	NA
625	621.13	wind	1.0	43200	> th	dose independent	rect.	10	3
634	621.20	precipitation	0.1	270	> th	dose independent	rect.	17	16
637	621.27	radiation	1.0	1440	> th	dose independent	rect.	10	4
645	621.33	radiation	10.0	4320	< th	dose dependent	rect.	19	10
668	621.55	precipitation	0.1	270	> th	dose independent	rect.	17	14
672	621.56	wind	7.0	43200	> th	dose dependent	rect.	16	1
699	621.86	temperature	20.0	720	< th	dose independent	rect.	21	4
706	621.92	radiation	1.0	1440	< th	dose dependent	rect.	10	4
711	621.98	wind	1.0	14400	> th	dose dependent	rect.	1	1
714	622.02	temperature	20.0	720	< th	dose independent	rect.	23	1
730	622.18	temperature	20.0	720	< th	dose independent	rect.	12	17
737	622.29	wind	1.0	43200	< th	dose independent	rect.	8	5
743	622.32	temperature	20.0	30	> th	dose independent	rect.	12	18
755	622.42	temperature	20.0	270	> th	dose independent	rect.	21	9
767	622.50	temperature	20.0	14400	< th	dose independent	rect.	13	8
771	622.54	temperature	20.0	14400	< th	dose independent	rect.	17	4
808	622.89	atmosphere	1005.0	720	> th	dose independent	rect.	19	5
809	622.89	temperature	20.0	720	< th	dose independent	rect.	19	6
816	622.94	humidity	90.0	14400	> th	dose dependent	rect.	12	5
827	623.07	radiation	20.0	1440	< th	dose dependent	rect.	11	13
843	623.14	radiation	1.0	1440	> th	dose independent	rect.	13	1
851	623.20	humidity	90.0	14400	> th	dose independent	rect.	7	1
855	623.22	wind	7.0	720	> th	dose independent	sin	12	NA
856	623.22	radiation	20.0	1440	< th	dose dependent	rect.	11	16
896	623.39	humidity	80.0	14400	> th	dose dependent	rect.	10	1
908	623.46	wind	7.0	4320	> th	dose independent	sin	15	NA
929	623.52	radiation	20.0	4320	> th	dose dependent	rect.	6	2
949	623.57	humidity	90.0	14400	> th	dose independent	rect.	7	16
952	623.59	temperature	20.0	14400	> th	dose independent	rect.	12	9
958	623.63	wind	5.0	720	> th	dose independent	rect.	21	1
959	623.63	wind	1.0	43200	< th	dose independent	rect.	10	7
973	623.72	humidity	90.0	14400	> th	dose independent	rect.	16	7
985	623.77	wind	1.0	43200	> th	dose independent	rect.	10	7
987	623.78	humidity	90.0	14400	> th	dose independent	rect.	9	14
992	623.84	radiation	10.0	43200	< th	dose independent	rect.	17	11
996	623.85	wind	3.0	43200	> th	dose independent	rect.	6	1
997	623.85	radiation	30.0	4320	< th	dose independent	rect.	4	4
999	623.85	radiation	30.0	4320	< th	dose independent	rect.	2	6