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Os07g0185900

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Conserved hypothetical protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 14.3 (0.0318) R2 : 0.91
β1 : -- (--) R2dD : -- R2D : --
β2 : 2.89 (0.118) R2dC : 0.287 R2C : 0.671
β3 : -2.22 (0.102) R2dE : 0.228 R2E : 0.62
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : -0.295 (0.0674) R2dN8 : 0.00479 R2N8 : 0.00807
σ : 0.596
deviance : 163.88
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_____
C
peak time of C : 10.8
E
wheather : temperature
threshold : 20
memory length : 97
response mode : > th
dose dependency : dose independent
G
type of G : rect.
peak or start time of G : 17.9
open length of G : 9.11

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Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = temperature, response mode = > th, dose dependency = dose independent, type of G = rect.)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
157.62 0.59 14.3 -0.447 2.98 -2.15 0.743 0.519 -0.33 10.7 20.06 93 17.9 9.03
158.19 0.586 14.3 -0.467 2.95 -2.16 0.398 -- -0.33 10.7 20.01 92 17.9 9.05
158.68 0.587 14.3 -0.449 2.93 -2.18 -- 0.0273 -0.336 10.8 20.03 94 17.9 9.1
158.62 0.587 14.3 -0.448 2.9 -2.21 -- -- -0.341 10.8 20.02 97 17.8 9.1
259.98 0.751 14.3 0.311 -- -4.32 -- 0.934 -0.0684 -- 18.9 175 16.7 9.97
320.47 0.839 14.3 -0.701 4.86 -- 0.993 -- -0.567 10.7 -- -- -- --
324.58 0.844 14.3 -0.661 4.85 -- -- -- -0.563 10.7 -- -- -- --
244.87 0.729 14.3 0.0327 -- -4.16 -- -- -0.289 -- 18.9 181 16.6 10
163.88 0.596 14.3 -- 2.89 -2.22 -- -- -0.295 10.8 20 97 17.9 9.11
1779.62 1.97 14.4 -0.758 -- -- -- -- -0.592 -- -- -- -- --
336.1 0.858 14.3 -- 4.86 -- -- -- -0.49 10.8 -- -- -- --
221.17 0.693 14.4 -- -- -4.56 -- -- -0.315 -- 19.1 255 16.5 9.06
1794.77 1.98 14.4 -- -- -- -- -- -0.508 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 158.14 temperature 20.0 90 > th dose independent rect. 18 9
2 167.72 temperature 15.0 90 > th dose dependent rect. 18 9
3 168.44 temperature 20.0 270 > th dose independent rect. 16 9
50 199.86 temperature 20.0 90 > th dose independent rect. 18 18
59 201.76 temperature 10.0 270 > th dose dependent rect. 18 16
93 210.44 radiation 1.0 90 < th dose independent rect. 13 14
94 210.45 radiation 1.0 90 < th dose independent rect. 15 12
99 210.95 radiation 1.0 90 < th dose independent rect. 9 18
130 213.81 atmosphere 1010.0 90 < th dose independent rect. 18 9
131 214.13 radiation 1.0 90 > th dose independent sin 16 NA
132 214.58 radiation 1.0 90 > th dose independent rect. 12 18
133 214.68 temperature 20.0 90 > th dose independent rect. 7 20
139 215.01 radiation 10.0 90 < th dose dependent rect. 15 12
140 215.06 radiation 1.0 90 < th dose independent sin 16 NA
141 215.15 radiation 1.0 30 < th dose dependent sin 15 NA
152 215.53 radiation 1.0 90 < th dose dependent rect. 13 14
155 215.97 radiation 1.0 90 < th dose dependent rect. 9 18
170 216.65 radiation 10.0 90 < th dose dependent rect. 17 10
192 218.29 temperature 30.0 270 < th dose dependent rect. 21 8
210 219.82 radiation 1.0 90 > th dose independent rect. 12 7
288 222.94 atmosphere 1010.0 270 < th dose independent rect. 16 9
290 223.01 temperature 10.0 270 > th dose dependent rect. 11 6
306 224.29 precipitation 0.1 90 < th dose independent rect. 3 15
307 224.29 precipitation 0.1 90 < th dose dependent rect. 3 15
309 224.40 temperature 30.0 90 < th dose dependent rect. 23 8
319 224.70 temperature 10.0 270 > th dose dependent rect. 12 4
328 225.03 atmosphere 1015.0 270 < th dose independent rect. 17 18
348 226.21 temperature 25.0 90 > th dose independent rect. 12 6
371 227.19 precipitation 0.1 270 < th dose independent rect. 11 6
372 227.19 precipitation 0.1 270 < th dose dependent rect. 11 6
428 228.45 temperature 10.0 270 > th dose dependent rect. 13 2
431 228.62 humidity 50.0 270 > th dose independent rect. 17 18
438 228.86 humidity 80.0 270 < th dose independent rect. 12 4
440 228.90 precipitation 0.1 270 < th dose independent rect. 12 17
441 228.90 precipitation 0.1 270 < th dose dependent rect. 12 17
453 229.42 wind 7.0 270 < th dose independent rect. 11 6
460 229.72 temperature 10.0 270 > th dose independent rect. 11 6
461 229.72 atmosphere 1015.0 270 < th dose independent rect. 11 6
463 229.73 wind 9.0 90 < th dose independent rect. 3 15
470 229.95 radiation 40.0 270 < th dose dependent rect. 15 10
473 230.03 wind 9.0 270 < th dose independent rect. 17 18
476 230.18 humidity 90.0 90 < th dose independent rect. 12 6
485 230.45 radiation 20.0 270 < th dose independent rect. 15 10
488 230.55 temperature 25.0 270 < th dose independent rect. 20 10
500 230.64 atmosphere 1015.0 270 < th dose independent rect. 16 20
501 230.66 atmosphere 995.0 270 > th dose independent rect. 17 18
504 230.73 radiation 1.0 270 > th dose independent rect. 10 20
514 230.98 radiation 1.0 270 > th dose independent rect. 13 2
531 231.27 humidity 50.0 90 > th dose independent rect. 18 9
535 231.27 temperature 10.0 90 > th dose independent rect. 3 15
536 231.27 atmosphere 1015.0 90 < th dose independent rect. 3 15
541 231.34 wind 9.0 90 < th dose independent rect. 18 9
543 231.37 atmosphere 995.0 90 > th dose independent rect. 18 9
554 231.80 precipitation 0.1 270 < th dose independent rect. 11 19
555 231.80 precipitation 0.1 270 < th dose dependent rect. 11 19
562 231.98 wind 1.0 270 > th dose independent rect. 11 6
564 232.01 wind 7.0 270 < th dose independent rect. 12 4
565 232.04 precipitation 0.1 270 < th dose independent rect. 1 15
566 232.04 precipitation 0.1 270 < th dose dependent rect. 1 15
587 232.33 radiation 1.0 270 > th dose dependent rect. 12 7
629 232.98 humidity 90.0 10 < th dose independent rect. 12 7
641 233.31 temperature 10.0 90 > th dose dependent rect. 3 15
657 233.87 wind 9.0 270 < th dose independent rect. 1 15
658 233.90 wind 7.0 270 < th dose independent rect. 13 2
684 234.19 precipitation 0.1 270 < th dose independent rect. 12 4
685 234.19 precipitation 0.1 270 < th dose dependent rect. 12 4
688 234.22 temperature 10.0 270 > th dose independent rect. 1 15
689 234.22 atmosphere 1015.0 270 < th dose independent rect. 1 15
713 234.59 atmosphere 1010.0 270 < th dose independent rect. 12 4
732 234.74 atmosphere 1015.0 10 < th dose independent rect. 19 17
738 234.84 wind 9.0 270 < th dose independent rect. 16 9
753 234.91 temperature 10.0 270 > th dose independent rect. 12 4
763 235.04 atmosphere 1015.0 270 < th dose independent rect. 7 14
770 235.13 wind 9.0 270 < th dose independent rect. 12 17
778 235.28 temperature 10.0 270 > th dose independent rect. 5 7
779 235.28 atmosphere 995.0 270 > th dose independent rect. 5 7
780 235.28 atmosphere 1015.0 270 < th dose independent rect. 5 7
781 235.28 temperature 10.0 270 > th dose independent rect. 12 17
790 235.43 precipitation 0.1 270 < th dose independent rect. 5 7
791 235.43 precipitation 0.1 270 < th dose dependent rect. 5 7
796 235.51 wind 9.0 270 < th dose independent rect. 16 20
802 235.73 precipitation 0.1 270 < th dose independent rect. 13 2
803 235.73 precipitation 0.1 270 < th dose dependent rect. 13 2
806 235.80 wind 9.0 270 < th dose independent rect. 5 7
828 236.04 precipitation 0.1 270 < th dose independent rect. 10 21
829 236.04 precipitation 0.1 270 < th dose dependent rect. 10 21
837 236.29 wind 1.0 270 > th dose independent rect. 12 4
842 236.46 radiation 30.0 270 < th dose dependent rect. 21 10
852 236.63 humidity 90.0 270 < th dose dependent rect. 12 4
853 236.64 humidity 50.0 270 > th dose independent rect. 5 7
860 236.69 atmosphere 995.0 270 > th dose independent rect. 16 20
863 236.78 temperature 10.0 270 > th dose independent rect. 13 2
865 236.78 atmosphere 1010.0 270 < th dose independent rect. 13 2
867 236.78 temperature 10.0 270 > th dose independent rect. 15 22
886 236.95 wind 1.0 270 > th dose independent rect. 16 9
902 237.14 precipitation 0.1 270 < th dose independent rect. 17 18
904 237.14 precipitation 0.1 270 < th dose dependent rect. 17 18
933 237.60 humidity 90.0 270 < th dose dependent rect. 13 2
941 237.76 temperature 30.0 90 < th dose independent rect. 17 10
961 238.06 radiation 1.0 90 > th dose dependent sin 14 NA
966 238.10 temperature 15.0 10 > th dose dependent rect. 14 5
972 238.18 wind 9.0 270 < th dose independent rect. 11 19
982 238.34 temperature 10.0 270 > th dose independent rect. 6 5
983 238.34 atmosphere 995.0 270 > th dose independent rect. 6 5
984 238.34 atmosphere 1015.0 270 < th dose independent rect. 6 5
985 238.34 temperature 10.0 270 > th dose independent rect. 11 19
995 238.42 precipitation 0.1 270 < th dose independent rect. 6 5
996 238.42 precipitation 0.1 270 < th dose dependent rect. 6 5
997 238.43 precipitation 0.1 90 < th dose independent rect. 18 9
998 238.43 precipitation 0.1 90 < th dose dependent rect. 18 9
999 238.45 temperature 25.0 270 > th dose independent rect. 13 2