Os07g0185000
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to MAP kinase (Ser/Thr kinase).
FiT-DB / Search/ Help/ Sample detail
|
Os07g0185000 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
|
Description : Similar to MAP kinase (Ser/Thr kinase).
|
|
log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
|
_____ |
|
__
Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 106.56 | 0.485 | 9.44 | -2.82 | 1.6 | -3.06 | 0.521 | -2.42 | -0.249 | 6.88 | 19.84 | 310 | -- | -- |
| 107.42 | 0.483 | 9.47 | -2.82 | 1.6 | -1.97 | 0.385 | -- | -0.251 | 6.9 | 20.23 | 348 | -- | -- |
| 107.12 | 0.482 | 9.44 | -2.83 | 1.59 | -3.18 | -- | -2.46 | -0.243 | 6.82 | 19.6 | 311 | -- | -- |
| 107.79 | 0.484 | 9.47 | -2.82 | 1.6 | -1.97 | -- | -- | -0.262 | 6.89 | 20.25 | 366 | -- | -- |
| 233.3 | 0.711 | 9.49 | -2.7 | -- | -2.54 | -- | -1.05 | -0.18 | -- | 19.04 | 48 | -- | -- |
| 130.42 | 0.535 | 9.44 | -2.47 | 1.52 | -- | 0.467 | -- | -0.122 | 6.99 | -- | -- | -- | -- |
| 130.94 | 0.536 | 9.44 | -2.46 | 1.53 | -- | -- | -- | -0.124 | 6.92 | -- | -- | -- | -- |
| 233.52 | 0.712 | 9.49 | -2.69 | -- | -2.07 | -- | -- | -0.18 | -- | 19.12 | 48 | -- | -- |
| 289.05 | 0.796 | 9.38 | -- | 1.5 | -0.712 | -- | -- | 0.142 | 7.02 | 17.3 | 265 | -- | -- |
| 253.23 | 0.744 | 9.47 | -2.43 | -- | -- | -- | -- | -0.0949 | -- | -- | -- | -- | -- |
| 290.79 | 0.798 | 9.38 | -- | 1.5 | -- | -- | -- | 0.151 | 7.02 | -- | -- | -- | -- |
| 407.2 | 0.943 | 9.41 | -- | -- | -0.731 | -- | -- | 0.165 | -- | 17.52 | 8 | -- | -- |
| 409.07 | 0.944 | 9.41 | -- | -- | -- | -- | -- | 0.175 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
|
Histogram 
|
Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 96.15 | atmosphere | 1015.0 | 1440 | < th | dose independent | rect. | 1 | 6 |
| 2 | 97.22 | temperature | 15.0 | 1440 | > th | dose independent | rect. | 1 | 6 |
| 14 | 99.35 | humidity | 70.0 | 14400 | > th | dose dependent | rect. | 2 | 5 |
| 24 | 100.13 | radiation | 1.0 | 720 | < th | dose independent | rect. | 9 | 4 |
| 25 | 100.13 | radiation | 1.0 | 720 | < th | dose dependent | rect. | 9 | 4 |
| 29 | 100.34 | humidity | 90.0 | 720 | > th | dose independent | rect. | 11 | 2 |
| 34 | 100.61 | humidity | 50.0 | 14400 | > th | dose dependent | rect. | 3 | 3 |
| 41 | 100.90 | humidity | 90.0 | 720 | > th | dose dependent | rect. | 11 | 2 |
| 47 | 101.21 | wind | 9.0 | 1440 | < th | dose independent | rect. | 1 | 9 |
| 49 | 101.34 | humidity | 50.0 | 43200 | > th | dose independent | rect. | 1 | 4 |
| 65 | 101.98 | humidity | 90.0 | 14400 | > th | dose independent | rect. | 3 | 5 |
| 68 | 102.09 | temperature | 15.0 | 14400 | < th | dose independent | rect. | 6 | 4 |
| 70 | 102.10 | temperature | 20.0 | 270 | > th | dose independent | rect. | 4 | 18 |
| 76 | 102.32 | wind | 9.0 | 4320 | > th | dose independent | rect. | 17 | 4 |
| 77 | 102.35 | temperature | 20.0 | 270 | < th | dose dependent | rect. | 1 | 21 |
| 80 | 102.45 | temperature | 20.0 | 270 | > th | dose independent | rect. | 5 | 16 |
| 84 | 102.52 | radiation | 30.0 | 4320 | < th | dose independent | rect. | 1 | 6 |
| 85 | 102.58 | radiation | 1.0 | 720 | < th | dose independent | rect. | 10 | 1 |
| 86 | 102.58 | radiation | 1.0 | 720 | < th | dose dependent | rect. | 10 | 1 |
| 88 | 102.60 | temperature | 20.0 | 270 | < th | dose dependent | sin | 23 | NA |
| 93 | 102.71 | temperature | 15.0 | 1440 | > th | dose independent | rect. | 13 | 18 |
| 97 | 102.77 | temperature | 15.0 | 1440 | > th | dose independent | rect. | 15 | 16 |
| 101 | 102.81 | temperature | 15.0 | 1440 | > th | dose independent | rect. | 1 | 18 |
| 106 | 102.88 | wind | 9.0 | 4320 | > th | dose dependent | rect. | 18 | 3 |
| 115 | 103.02 | temperature | 15.0 | 1440 | > th | dose independent | rect. | 7 | 6 |
| 126 | 103.13 | temperature | 15.0 | 1440 | > th | dose independent | rect. | 17 | 14 |
| 132 | 103.24 | humidity | 90.0 | 14400 | > th | dose independent | rect. | 4 | 3 |
| 135 | 103.26 | wind | 5.0 | 4320 | > th | dose dependent | rect. | 17 | 4 |
| 149 | 103.36 | temperature | 20.0 | 30 | < th | dose dependent | sin | 2 | NA |
| 153 | 103.41 | wind | 9.0 | 4320 | < th | dose independent | rect. | 17 | 4 |
| 159 | 103.44 | temperature | 15.0 | 14400 | < th | dose independent | rect. | 5 | 12 |
| 169 | 103.55 | wind | 3.0 | 4320 | < th | dose independent | rect. | 22 | 3 |
| 170 | 103.57 | temperature | 15.0 | 14400 | < th | dose independent | rect. | 5 | 6 |
| 201 | 103.79 | temperature | 20.0 | 270 | < th | dose dependent | rect. | 23 | 19 |
| 205 | 103.83 | temperature | 20.0 | 270 | < th | dose dependent | sin | 4 | NA |
| 209 | 103.84 | wind | 3.0 | 4320 | > th | dose independent | rect. | 22 | 3 |
| 216 | 103.90 | temperature | 15.0 | 720 | > th | dose independent | sin | 0 | NA |
| 225 | 103.95 | humidity | 90.0 | 14400 | < th | dose independent | rect. | 3 | 5 |
| 228 | 103.97 | temperature | 15.0 | 14400 | > th | dose independent | rect. | 6 | 11 |
| 231 | 103.98 | humidity | 50.0 | 43200 | < th | dose dependent | rect. | 18 | 2 |
| 243 | 104.02 | humidity | 80.0 | 14400 | > th | dose dependent | rect. | 20 | 12 |
| 244 | 104.03 | temperature | 15.0 | 14400 | < th | dose independent | sin | 0 | NA |
| 250 | 104.04 | wind | 3.0 | 4320 | > th | dose dependent | rect. | 16 | 10 |
| 258 | 104.10 | wind | 7.0 | 4320 | > th | dose dependent | rect. | 17 | 1 |
| 266 | 104.15 | temperature | 15.0 | 14400 | > th | dose independent | rect. | 7 | 4 |
| 271 | 104.18 | temperature | 15.0 | 90 | > th | dose independent | sin | 7 | NA |
| 272 | 104.18 | temperature | 15.0 | 90 | > th | dose independent | sin | 19 | NA |
| 273 | 104.18 | temperature | 15.0 | 90 | > th | dose independent | sin | 5 | NA |
| 276 | 104.20 | humidity | 90.0 | 14400 | < th | dose independent | rect. | 6 | 1 |
| 280 | 104.21 | temperature | 20.0 | 270 | < th | dose dependent | rect. | 23 | 14 |
| 284 | 104.22 | wind | 5.0 | 4320 | > th | dose independent | rect. | 16 | 10 |
| 285 | 104.22 | wind | 5.0 | 4320 | > th | dose dependent | rect. | 14 | 12 |
| 287 | 104.23 | temperature | 15.0 | 90 | > th | dose independent | sin | 21 | NA |
| 308 | 104.32 | temperature | 15.0 | 14400 | < th | dose dependent | rect. | 9 | 1 |
| 322 | 104.37 | atmosphere | 1015.0 | 4320 | < th | dose independent | rect. | 15 | 4 |
| 336 | 104.44 | temperature | 15.0 | 14400 | > th | dose independent | rect. | 6 | 6 |
| 369 | 104.60 | humidity | 90.0 | 720 | > th | dose independent | sin | 0 | NA |
| 377 | 104.62 | temperature | 20.0 | 720 | < th | dose dependent | rect. | 20 | 18 |
| 387 | 104.65 | wind | 5.0 | 4320 | < th | dose independent | rect. | 16 | 10 |
| 408 | 104.73 | temperature | 15.0 | 1440 | > th | dose independent | sin | 8 | NA |
| 410 | 104.73 | temperature | 15.0 | 4320 | > th | dose independent | rect. | 13 | 6 |
| 427 | 104.79 | temperature | 15.0 | 4320 | > th | dose independent | rect. | 15 | 4 |
| 444 | 104.84 | humidity | 90.0 | 720 | > th | dose independent | rect. | 9 | 5 |
| 454 | 104.87 | temperature | 15.0 | 1440 | > th | dose independent | rect. | 1 | 15 |
| 465 | 104.91 | temperature | 15.0 | 14400 | < th | dose independent | rect. | 6 | 21 |
| 486 | 104.99 | wind | 5.0 | 4320 | > th | dose independent | rect. | 17 | 6 |
| 492 | 105.00 | atmosphere | 1015.0 | 4320 | < th | dose independent | rect. | 17 | 2 |
| 496 | 105.01 | wind | 9.0 | 4320 | < th | dose independent | rect. | 17 | 8 |
| 507 | 105.03 | temperature | 20.0 | 720 | < th | dose dependent | rect. | 1 | 16 |
| 557 | 105.19 | wind | 9.0 | 4320 | < th | dose independent | rect. | 17 | 1 |
| 572 | 105.21 | temperature | 20.0 | 720 | < th | dose dependent | rect. | 3 | 13 |
| 596 | 105.27 | temperature | 15.0 | 14400 | > th | dose independent | sin | 23 | NA |
| 603 | 105.28 | humidity | 90.0 | 14400 | > th | dose dependent | sin | 6 | NA |
| 650 | 105.41 | radiation | 30.0 | 4320 | < th | dose independent | rect. | 17 | 14 |
| 651 | 105.41 | temperature | 15.0 | 14400 | > th | dose independent | rect. | 7 | 18 |
| 672 | 105.46 | temperature | 20.0 | 270 | < th | dose dependent | rect. | 1 | 12 |
| 681 | 105.48 | temperature | 15.0 | 270 | > th | dose independent | rect. | 9 | 22 |
| 726 | 105.60 | humidity | 90.0 | 720 | > th | dose dependent | rect. | 9 | 5 |
| 739 | 105.62 | precipitation | 0.1 | 720 | > th | dose independent | rect. | 8 | 5 |
| 743 | 105.62 | precipitation | 0.1 | 720 | > th | dose dependent | rect. | 8 | 5 |
| 755 | 105.65 | temperature | 15.0 | 14400 | < th | dose dependent | rect. | 8 | 3 |
| 773 | 105.68 | temperature | 15.0 | 720 | > th | dose independent | sin | 13 | NA |
| 785 | 105.71 | humidity | 90.0 | 4320 | > th | dose independent | rect. | 2 | 1 |
| 786 | 105.71 | wind | 7.0 | 4320 | < th | dose independent | rect. | 14 | 8 |
| 791 | 105.72 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 23 | 1 |
| 793 | 105.72 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 23 | 1 |
| 802 | 105.73 | temperature | 20.0 | 30 | < th | dose dependent | rect. | 24 | 20 |
| 809 | 105.74 | temperature | 25.0 | 270 | < th | dose dependent | rect. | 7 | 4 |
| 852 | 105.82 | temperature | 15.0 | 14400 | < th | dose independent | rect. | 7 | 10 |
| 886 | 105.88 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 23 | 1 |
| 888 | 105.88 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 23 | 1 |
| 909 | 105.94 | temperature | 20.0 | 30 | < th | dose dependent | rect. | 24 | 18 |
| 913 | 105.95 | humidity | 50.0 | 43200 | < th | dose dependent | rect. | 18 | 13 |
| 926 | 105.97 | temperature | 15.0 | 14400 | < th | dose dependent | rect. | 7 | 5 |
| 990 | 106.06 | wind | 9.0 | 4320 | < th | dose dependent | rect. | 17 | 10 |
| 994 | 106.07 | temperature | 15.0 | 720 | > th | dose independent | rect. | 19 | 16 |
| 995 | 106.07 | temperature | 20.0 | 4320 | < th | dose dependent | rect. | 12 | 1 |