Os07g0183200
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Transcriptional factor B3 family protein.
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Os07g0183200 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Transcriptional factor B3 family protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = atmosphere,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 50.83 | 0.332 | -1130 | 6950 | 0.111 | -333000 | 0.174 | 2030000 | -0.0347 | 7.41 | 995 | 10 | -- | -- |
| 50.73 | 0.334 | 3.13 | 0.0254 | 0.11 | 1.26 | 0.167 | -- | -0.0351 | 7.38 | 995 | 10 | -- | -- |
| 50.86 | 0.332 | -1130 | 6950 | 0.116 | -333000 | -- | 2030000 | -0.0358 | 6.51 | 995 | 10 | -- | -- |
| 50.75 | 0.332 | 3.13 | 0.0281 | 0.113 | 1.27 | -- | -- | -0.0343 | 6.56 | 994.9 | 6 | -- | -- |
| 51.56 | 0.334 | -1130 | 6950 | -- | -333000 | -- | 2030000 | -0.0337 | -- | 995 | 10 | -- | -- |
| 52.47 | 0.34 | 3.13 | 0.0336 | 0.0914 | -- | 0.193 | -- | -0.0383 | 8.11 | -- | -- | -- | -- |
| 52.51 | 0.339 | 3.13 | 0.0376 | 0.101 | -- | -- | -- | -0.0393 | 6.74 | -- | -- | -- | -- |
| 51.43 | 0.334 | 3.13 | 0.032 | -- | 1.24 | -- | -- | -0.034 | -- | 994.9 | 6 | -- | -- |
| 50.77 | 0.332 | 3.13 | -- | 0.115 | 1.29 | -- | -- | -0.0391 | 6.48 | 994.9 | 6 | -- | -- |
| 53.04 | 0.34 | 3.13 | 0.0398 | -- | -- | -- | -- | -0.0373 | -- | -- | -- | -- | -- |
| 52.55 | 0.339 | 3.13 | -- | 0.101 | -- | -- | -- | -0.0435 | 6.72 | -- | -- | -- | -- |
| 51.46 | 0.334 | 3.13 | -- | -- | 1.24 | -- | -- | -0.0374 | -- | 994.9 | 8 | -- | -- |
| 53.08 | 0.34 | 3.14 | -- | -- | -- | -- | -- | -0.0418 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 40.20 | wind | 1 | 30 | < th | dose dependent | rect. | 7 | 1 |
| 11 | 40.91 | wind | 1 | 10 | < th | dose independent | rect. | 7 | 1 |
| 26 | 42.89 | radiation | 30 | 10 | > th | dose dependent | rect. | 7 | 2 |
| 165 | 46.20 | radiation | 10 | 90 | > th | dose dependent | rect. | 6 | 1 |
| 183 | 46.39 | wind | 1 | 30 | < th | dose dependent | rect. | 7 | 20 |
| 197 | 46.80 | radiation | 30 | 10 | > th | dose independent | rect. | 8 | 1 |
| 243 | 47.37 | temperature | 25 | 10 | > th | dose dependent | rect. | 7 | 1 |
| 253 | 47.65 | temperature | 25 | 90 | > th | dose dependent | rect. | 4 | 4 |
| 294 | 47.82 | wind | 7 | 10 | > th | dose independent | rect. | 21 | 7 |
| 300 | 47.82 | wind | 7 | 10 | > th | dose dependent | rect. | 21 | 8 |
| 317 | 47.88 | wind | 9 | 30 | > th | dose independent | rect. | 21 | 5 |
| 336 | 47.88 | wind | 9 | 30 | > th | dose dependent | rect. | 21 | 5 |
| 356 | 47.91 | wind | 7 | 30 | > th | dose independent | rect. | 21 | 1 |
| 362 | 47.91 | wind | 7 | 30 | > th | dose dependent | rect. | 21 | 1 |
| 365 | 47.91 | wind | 9 | 90 | > th | dose dependent | rect. | 18 | 4 |
| 400 | 47.99 | temperature | 25 | 90 | > th | dose dependent | rect. | 1 | 7 |
| 466 | 48.12 | humidity | 80 | 10 | < th | dose independent | rect. | 6 | 2 |
| 468 | 48.13 | wind | 9 | 90 | > th | dose independent | rect. | 18 | 4 |
| 539 | 48.26 | temperature | 25 | 10 | > th | dose dependent | rect. | 4 | 4 |
| 641 | 48.28 | temperature | 25 | 10 | > th | dose dependent | rect. | 1 | 7 |
| 756 | 48.60 | humidity | 80 | 10 | < th | dose independent | rect. | 21 | 11 |
| 767 | 48.63 | radiation | 10 | 10 | > th | dose independent | rect. | 7 | 1 |
| 773 | 48.67 | temperature | 25 | 30 | > th | dose independent | rect. | 7 | 1 |
| 774 | 48.68 | wind | 1 | 30 | < th | dose independent | rect. | 7 | 20 |
| 864 | 48.94 | atmosphere | 995 | 10 | > th | dose independent | rect. | 3 | 23 |
| 881 | 48.99 | wind | 9 | 720 | < th | dose independent | rect. | 23 | 16 |
| 884 | 49.00 | atmosphere | 995 | 720 | > th | dose independent | rect. | 23 | 16 |
| 887 | 49.01 | atmosphere | 1005 | 90 | > th | dose dependent | rect. | 2 | 1 |
| 915 | 49.14 | atmosphere | 1000 | 720 | > th | dose independent | rect. | 3 | 8 |
| 943 | 49.25 | humidity | 80 | 10 | < th | dose independent | rect. | 2 | 6 |
| 955 | 49.27 | atmosphere | 1005 | 10 | > th | dose dependent | rect. | 2 | 2 |
| 963 | 49.31 | humidity | 90 | 10 | < th | dose dependent | rect. | 7 | 1 |
| 983 | 49.36 | wind | 9 | 30 | < th | dose independent | sin | 10 | NA |
| 996 | 49.40 | temperature | 25 | 90 | > th | dose independent | rect. | 4 | 4 |
| 998 | 49.40 | wind | 9 | 720 | < th | dose independent | rect. | 3 | 8 |