Os07g0181200
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
FiT-DB / Search/ Help/ Sample detail
|
Os07g0181200 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
|
Description : Conserved hypothetical protein.
|
|
log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
|
_____ |
|
__
Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 350.59 | 0.88 | 3.49 | -2.05 | 0.211 | 1.93 | 0.64 | -14.5 | 0.286 | 5.47 | 30.09 | 4000 | -- | -- |
| 358.39 | 0.882 | 3.27 | -0.167 | 0.184 | 0.637 | 0.787 | -- | 0.0951 | 4.73 | 21 | 13739 | -- | -- |
| 351.59 | 0.873 | 3.49 | -2.03 | 0.214 | 1.93 | -- | -14.4 | 0.285 | 5.5 | 30.09 | 3997 | -- | -- |
| 358.78 | 0.882 | 3.27 | -0.181 | 0.191 | 0.635 | -- | -- | 0.102 | 4.61 | 20.77 | 14994 | -- | -- |
| 353.71 | 0.876 | 3.48 | -2.02 | -- | 2.02 | -- | -15.1 | 0.366 | -- | 30.2 | 3952 | -- | -- |
| 364.37 | 0.895 | 3.21 | 0.383 | 0.192 | -- | 0.592 | -- | 0.339 | 5.08 | -- | -- | -- | -- |
| 365.23 | 0.895 | 3.21 | 0.382 | 0.196 | -- | -- | -- | 0.336 | 4.63 | -- | -- | -- | -- |
| 359.9 | 0.884 | 3.27 | -0.0524 | -- | 0.582 | -- | -- | 0.14 | -- | 21 | 9291 | -- | -- |
| 359.19 | 0.883 | 3.26 | -- | 0.189 | 0.507 | -- | -- | 0.15 | 4.82 | 20.6 | 16209 | -- | -- |
| 367.27 | 0.895 | 3.22 | 0.39 | -- | -- | -- | -- | 0.342 | -- | -- | -- | -- | -- |
| 369.08 | 0.899 | 3.22 | -- | 0.203 | -- | -- | -- | 0.294 | 4.58 | -- | -- | -- | -- |
| 359.97 | 0.884 | 3.26 | -- | -- | 0.567 | -- | -- | 0.142 | -- | 21.09 | 9292 | -- | -- |
| 371.27 | 0.899 | 3.23 | -- | -- | -- | -- | -- | 0.298 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
|
Histogram 
|
Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 345.74 | radiation | 20 | 43200 | > th | dose independent | rect. | 15 | 2 |
| 16 | 346.21 | wind | 1 | 1440 | < th | dose dependent | rect. | 11 | 1 |
| 32 | 346.64 | wind | 1 | 1440 | > th | dose independent | rect. | 11 | 1 |
| 48 | 346.91 | radiation | 20 | 43200 | < th | dose dependent | rect. | 15 | 1 |
| 52 | 347.24 | radiation | 40 | 43200 | > th | dose independent | rect. | 13 | 19 |
| 86 | 347.42 | radiation | 20 | 43200 | > th | dose independent | sin | 14 | NA |
| 89 | 347.55 | wind | 9 | 14400 | > th | dose dependent | rect. | 12 | 2 |
| 91 | 347.60 | humidity | 60 | 90 | < th | dose independent | rect. | 9 | 1 |
| 106 | 347.60 | radiation | 1 | 43200 | > th | dose dependent | rect. | 15 | 1 |
| 107 | 347.73 | humidity | 60 | 90 | < th | dose dependent | rect. | 9 | 1 |
| 126 | 347.88 | wind | 1 | 1440 | < th | dose independent | rect. | 11 | 1 |
| 190 | 348.47 | humidity | 70 | 43200 | > th | dose dependent | rect. | 19 | 1 |
| 197 | 348.63 | radiation | 30 | 43200 | < th | dose dependent | rect. | 15 | 6 |
| 198 | 348.63 | radiation | 30 | 43200 | < th | dose dependent | rect. | 15 | 11 |
| 221 | 348.73 | wind | 1 | 43200 | < th | dose dependent | rect. | 19 | 1 |
| 223 | 348.74 | humidity | 80 | 43200 | < th | dose independent | rect. | 17 | 5 |
| 281 | 348.92 | humidity | 80 | 43200 | < th | dose independent | rect. | 19 | 1 |
| 315 | 349.06 | humidity | 90 | 4320 | < th | dose dependent | rect. | 23 | 1 |
| 420 | 349.47 | humidity | 80 | 43200 | < th | dose independent | rect. | 18 | 3 |
| 469 | 349.61 | humidity | 60 | 43200 | < th | dose independent | sin | 9 | NA |
| 474 | 349.64 | radiation | 30 | 43200 | < th | dose dependent | sin | 15 | NA |
| 497 | 349.70 | radiation | 20 | 43200 | < th | dose independent | rect. | 15 | 1 |
| 501 | 349.72 | wind | 9 | 14400 | > th | dose dependent | rect. | 4 | 10 |
| 527 | 349.83 | humidity | 70 | 43200 | > th | dose independent | rect. | 16 | 1 |
| 535 | 349.87 | humidity | 60 | 43200 | > th | dose independent | rect. | 20 | 16 |
| 551 | 349.95 | humidity | 60 | 43200 | > th | dose independent | rect. | 24 | 12 |
| 554 | 349.96 | humidity | 60 | 43200 | < th | dose independent | rect. | 17 | 19 |
| 572 | 349.98 | humidity | 60 | 43200 | > th | dose independent | rect. | 10 | 1 |
| 586 | 349.98 | humidity | 70 | 43200 | < th | dose dependent | rect. | 1 | 10 |
| 607 | 350.01 | humidity | 80 | 43200 | > th | dose independent | rect. | 17 | 5 |
| 610 | 350.01 | humidity | 70 | 43200 | < th | dose dependent | rect. | 21 | 14 |
| 616 | 350.03 | wind | 1 | 1440 | > th | dose independent | rect. | 9 | 3 |
| 629 | 350.08 | humidity | 70 | 43200 | < th | dose independent | rect. | 16 | 1 |
| 645 | 350.11 | humidity | 60 | 43200 | > th | dose independent | rect. | 17 | 18 |
| 647 | 350.12 | humidity | 60 | 43200 | > th | dose independent | sin | 10 | NA |
| 662 | 350.17 | humidity | 60 | 43200 | < th | dose independent | rect. | 10 | 2 |
| 716 | 350.33 | wind | 1 | 14400 | < th | dose dependent | rect. | 8 | 1 |
| 718 | 350.34 | humidity | 60 | 43200 | < th | dose independent | rect. | 20 | 16 |
| 748 | 350.41 | humidity | 60 | 43200 | < th | dose independent | rect. | 24 | 12 |
| 749 | 350.41 | radiation | 10 | 43200 | > th | dose dependent | sin | 15 | NA |
| 754 | 350.42 | humidity | 60 | 43200 | < th | dose independent | rect. | 2 | 10 |
| 809 | 350.61 | radiation | 40 | 43200 | > th | dose dependent | rect. | 13 | 3 |
| 888 | 350.76 | humidity | 80 | 14400 | > th | dose independent | rect. | 21 | 2 |
| 907 | 350.76 | humidity | 60 | 43200 | < th | dose dependent | rect. | 14 | 22 |
| 999 | 350.84 | temperature | 25 | 30 | > th | dose dependent | rect. | 17 | 1 |