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Os07g0180700

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Similar to Major facilitator superfamily antiporter.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 7.81 (0.0278) R2 : 0.711
β1 : 2.78 (0.102) R2dD : 0.496 R2D : 0.311
β2 : 1.16 (0.071) R2dC : 0.175 R2C : 0.109
β3 : 0.992 (0.0966) R2dE : 0.0718 R2E : -0.0949
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.951 (0.0604) R2dN8 : 0.218 R2N8 : 0.0289
σ : 0.518
deviance : 123.89
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C
peak time of C : 3.65
E
wheather : humidity
threshold : 70.89
memory length : 2683
response mode : > th
dose dependency : dose independent
G
type of G : no
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = humidity, response mode = > th, dose dependency = dose independent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
122.48 0.52 7.83 2.63 1.07 0.893 -0.256 1.22 0.866 3.94 69.95 2963 -- --
124.36 0.519 7.81 2.77 1.05 0.975 -0.188 -- 0.945 3.92 70 2899 -- --
122.67 0.516 7.83 2.64 1.07 0.901 -- 1.19 0.868 3.95 69.9 2963 -- --
123.89 0.518 7.81 2.78 1.16 0.992 -- -- 0.951 3.65 70.89 2683 -- --
154.52 0.582 7.84 2.76 -- 0.76 -- -0.0849 0.847 -- 72.79 1810 -- --
151.34 0.577 7.83 2.65 1.05 -- -0.409 -- 0.825 3.95 -- -- -- --
151.82 0.577 7.83 2.65 1.05 -- -- -- 0.827 3.98 -- -- -- --
142.36 0.556 7.83 2.77 -- 1.05 -- -- 0.892 -- 72.93 272 -- --
181.36 0.627 7.97 -- 1.14 2.7 -- -- 0.291 4.18 60 30335 -- --
211.89 0.68 7.84 2.69 -- -- -- -- 0.855 -- -- -- -- --
337.19 0.859 7.9 -- 1.1 -- -- -- 0.532 3.95 -- -- -- --
229.07 0.705 7.88 -- -- 2.83 -- -- 0.704 -- 64 30693 -- --
403.47 0.938 7.9 -- -- -- -- -- 0.556 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 121.19 wind 1.0 43200 < th dose dependent rect. 5 1
2 121.26 humidity 70.0 1440 > th dose independent rect. 16 21
4 121.64 wind 7.0 43200 < th dose dependent rect. 5 2
10 121.99 wind 1.0 43200 > th dose dependent rect. 5 2
13 122.04 humidity 70.0 14400 < th dose dependent rect. 17 1
21 122.44 humidity 70.0 1440 > th dose independent sin 11 NA
27 122.57 humidity 60.0 14400 < th dose independent sin 14 NA
28 122.57 humidity 70.0 1440 > th dose independent rect. 15 6
38 122.60 humidity 70.0 1440 > th dose independent rect. 15 16
57 122.73 humidity 60.0 14400 < th dose independent rect. 12 7
61 122.78 wind 3.0 43200 < th dose independent rect. 5 1
80 122.90 humidity 70.0 1440 < th dose independent rect. 16 21
87 122.97 wind 3.0 43200 > th dose independent rect. 5 1
91 123.01 humidity 60.0 14400 > th dose independent rect. 12 7
93 123.05 humidity 60.0 14400 > th dose independent sin 14 NA
130 123.16 wind 9.0 43200 < th dose dependent rect. 20 12
131 123.17 humidity 60.0 14400 < th dose independent rect. 15 4
133 123.23 wind 1.0 43200 < th dose dependent rect. 24 7
139 123.28 precipitation 0.1 4320 > th dose dependent rect. 14 3
155 123.35 humidity 70.0 14400 < th dose dependent rect. 16 16
156 123.36 wind 1.0 43200 < th dose dependent rect. 1 12
159 123.39 wind 9.0 43200 < th dose dependent sin 5 NA
163 123.41 wind 1.0 43200 > th dose dependent rect. 20 12
164 123.42 humidity 50.0 14400 > th dose independent rect. 15 3
182 123.45 wind 9.0 43200 < th dose dependent sin 9 NA
186 123.49 humidity 60.0 14400 > th dose independent rect. 17 1
222 123.54 humidity 50.0 14400 > th dose independent rect. 15 6
232 123.57 humidity 50.0 14400 > th dose independent rect. 15 13
235 123.59 humidity 50.0 14400 > th dose independent rect. 15 17
239 123.61 wind 3.0 43200 < th dose independent rect. 4 3
245 123.62 wind 7.0 43200 < th dose dependent rect. 1 14
262 123.65 wind 3.0 43200 > th dose independent rect. 5 3
279 123.73 wind 1.0 43200 > th dose dependent sin 5 NA
297 123.76 humidity 70.0 1440 < th dose independent rect. 15 5
312 123.77 wind 1.0 43200 > th dose dependent sin 9 NA
321 123.79 wind 1.0 43200 < th dose independent rect. 1 12
334 123.79 wind 7.0 43200 < th dose dependent rect. 4 10
335 123.80 precipitation 0.1 4320 < th dose independent rect. 14 3
337 123.80 precipitation 0.1 4320 < th dose dependent rect. 14 3
342 123.82 humidity 60.0 14400 > th dose independent rect. 12 3
372 123.94 humidity 60.0 14400 > th dose independent rect. 12 1
378 123.95 wind 1.0 43200 > th dose dependent rect. 1 14
382 123.96 humidity 70.0 14400 < th dose dependent sin 12 NA
445 124.07 precipitation 0.1 4320 > th dose independent rect. 12 5
453 124.09 humidity 70.0 1440 > th dose independent rect. 9 12
483 124.15 radiation 30.0 1440 < th dose independent rect. 15 19
496 124.17 precipitation 0.1 4320 > th dose independent rect. 14 3
515 124.17 wind 1.0 43200 > th dose dependent rect. 4 10
518 124.18 humidity 60.0 14400 < th dose independent rect. 12 1
529 124.19 precipitation 0.1 4320 > th dose independent rect. 24 18
530 124.20 precipitation 0.1 4320 > th dose independent sin 1 NA
552 124.25 wind 1.0 43200 < th dose dependent rect. 3 10
555 124.26 wind 1.0 43200 > th dose independent rect. 3 10
558 124.26 humidity 60.0 1440 > th dose dependent rect. 11 1
563 124.27 precipitation 0.1 4320 < th dose independent rect. 1 17
568 124.27 precipitation 0.1 4320 < th dose dependent rect. 1 17
577 124.28 precipitation 0.1 43200 > th dose dependent rect. 19 2
586 124.30 precipitation 0.1 4320 > th dose independent rect. 3 15
599 124.31 wind 5.0 43200 < th dose dependent rect. 1 7
613 124.33 precipitation 0.1 4320 < th dose independent rect. 3 15
615 124.33 humidity 60.0 14400 > th dose independent rect. 17 22
620 124.33 precipitation 0.1 4320 < th dose dependent rect. 3 15
621 124.34 precipitation 0.1 4320 < th dose independent sin 1 NA
626 124.34 precipitation 0.1 4320 < th dose dependent sin 1 NA
628 124.35 wind 5.0 43200 < th dose dependent rect. 23 9
659 124.40 wind 1.0 43200 < th dose dependent rect. 24 4
749 124.48 humidity 60.0 14400 > th dose independent no NA NA
750 124.48 wind 1.0 43200 < th dose independent rect. 3 10
834 124.52 precipitation 0.1 4320 > th dose dependent sin 2 NA
852 124.56 radiation 30.0 1440 > th dose independent rect. 15 19
902 124.60 humidity 70.0 1440 > th dose independent no NA NA
903 124.60 humidity 80.0 43200 < th dose independent rect. 22 1
907 124.60 humidity 70.0 1440 > th dose independent rect. 3 17
940 124.61 wind 3.0 43200 < th dose independent rect. 2 6
941 124.61 precipitation 0.1 4320 > th dose independent rect. 8 9
994 124.65 humidity 70.0 1440 < th dose independent sin 15 NA