Os07g0180300
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Protein of unknown function DUF594 family protein.
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Os07g0180300 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Protein of unknown function DUF594 family protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 34.16 | 0.275 | 12.6 | 0.661 | 1.39 | -1.58 | -0.374 | -1.74 | 0.2 | 13.3 | 22.2 | 5541 | -- | -- |
| 34.71 | 0.274 | 12.7 | 0.23 | 1.35 | -0.953 | -0.397 | -- | 0.0886 | 13.2 | 23.92 | 40499 | -- | -- |
| 34.71 | 0.274 | 12.6 | 0.663 | 1.38 | -1.5 | -- | -1.59 | 0.19 | 13.3 | 22.59 | 5549 | -- | -- |
| 34.75 | 0.275 | 12.7 | 0.127 | 1.36 | -0.98 | -- | -- | 0.0349 | 13.2 | 24.73 | 39272 | -- | -- |
| 144.38 | 0.563 | 12.6 | 0.847 | -- | -1.24 | -- | -0.356 | 0.247 | -- | 22.59 | 5549 | -- | -- |
| 47.98 | 0.325 | 12.6 | 1.1 | 1.36 | -- | -0.378 | -- | 0.408 | 13.2 | -- | -- | -- | -- |
| 48.57 | 0.326 | 12.6 | 1.09 | 1.36 | -- | -- | -- | 0.406 | 13.2 | -- | -- | -- | -- |
| 102.99 | 0.475 | 12.7 | 0.647 | -- | -1.71 | -- | -- | 0.0351 | -- | 28.39 | 4644 | -- | -- |
| 34.4 | 0.273 | 12.7 | -- | 1.36 | -1.11 | -- | -- | -0.021 | 13.1 | 24.21 | 39215 | -- | -- |
| 162.29 | 0.595 | 12.6 | 1.03 | -- | -- | -- | -- | 0.379 | -- | -- | -- | -- | -- |
| 79.72 | 0.418 | 12.6 | -- | 1.34 | -- | -- | -- | 0.285 | 13.2 | -- | -- | -- | -- |
| 113.35 | 0.497 | 12.7 | -- | -- | -1.89 | -- | -- | -0.0682 | -- | 28.39 | 4644 | -- | -- |
| 190.53 | 0.644 | 12.6 | -- | -- | -- | -- | -- | 0.264 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 31.90 | atmosphere | 1010 | 43200 | > th | dose dependent | rect. | 5 | 1 |
| 64 | 32.00 | atmosphere | 1010 | 43200 | > th | dose dependent | sin | 3 | NA |
| 143 | 32.05 | atmosphere | 1010 | 43200 | > th | dose independent | rect. | 4 | 1 |
| 202 | 32.08 | atmosphere | 1010 | 43200 | < th | dose independent | rect. | 4 | 1 |
| 230 | 32.09 | atmosphere | 1010 | 43200 | > th | dose dependent | no | NA | NA |
| 356 | 32.14 | atmosphere | 1010 | 43200 | > th | dose independent | rect. | 4 | 11 |
| 400 | 32.16 | atmosphere | 1010 | 43200 | < th | dose independent | rect. | 4 | 12 |
| 440 | 32.18 | atmosphere | 1010 | 43200 | < th | dose independent | rect. | 10 | 1 |
| 492 | 32.20 | atmosphere | 1010 | 43200 | > th | dose independent | sin | 2 | NA |
| 495 | 32.20 | atmosphere | 1010 | 43200 | < th | dose independent | rect. | 8 | 7 |
| 525 | 32.21 | atmosphere | 1010 | 43200 | < th | dose independent | rect. | 3 | 8 |
| 552 | 32.22 | atmosphere | 1010 | 43200 | < th | dose independent | sin | 2 | NA |
| 617 | 32.24 | atmosphere | 1010 | 43200 | < th | dose independent | rect. | 14 | 1 |
| 618 | 32.24 | atmosphere | 1010 | 43200 | > th | dose independent | rect. | 13 | 2 |
| 643 | 32.25 | atmosphere | 1010 | 43200 | > th | dose independent | rect. | 9 | 2 |
| 663 | 32.25 | atmosphere | 1010 | 43200 | > th | dose dependent | rect. | 17 | 1 |
| 664 | 32.25 | atmosphere | 1010 | 43200 | > th | dose dependent | rect. | 23 | 1 |
| 665 | 32.25 | atmosphere | 1010 | 43200 | > th | dose dependent | rect. | 22 | 3 |
| 671 | 32.25 | atmosphere | 1010 | 43200 | > th | dose dependent | rect. | 15 | 10 |