Os07g0179700
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description :
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Os07g0179700 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description :
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 116.2 | 0.506 | 3.35 | 0.171 | 0.0651 | 1.1 | 0.023 | -1.21 | 0.0305 | 23.8 | 19.63 | 25 | -- | -- |
| 116.57 | 0.503 | 3.36 | 0.155 | 0.0588 | 1.6 | -0.0723 | -- | 0.0254 | 23.6 | 19.43 | 33 | -- | -- |
| 116.2 | 0.502 | 3.35 | 0.169 | 0.0651 | 1.11 | -- | -1.18 | 0.0299 | 23.8 | 19.61 | 24 | -- | -- |
| 116.58 | 0.503 | 3.36 | 0.156 | 0.0589 | 1.6 | -- | -- | 0.0252 | 23.8 | 19.42 | 24 | -- | -- |
| 116.42 | 0.503 | 3.35 | 0.186 | -- | 1.08 | -- | -1.11 | 0.0405 | -- | 20.11 | 24 | -- | -- |
| 129.2 | 0.533 | 3.38 | -0.0705 | 0.124 | -- | -0.197 | -- | -0.052 | 0.107 | -- | -- | -- | -- |
| 129.37 | 0.533 | 3.38 | -0.0628 | 0.125 | -- | -- | -- | -0.0512 | 0.262 | -- | -- | -- | -- |
| 116.79 | 0.503 | 3.36 | 0.165 | -- | 1.61 | -- | -- | 0.0292 | -- | 19.49 | 24 | -- | -- |
| 117.18 | 0.504 | 3.37 | -- | 0.0688 | 1.51 | -- | -- | 0.00347 | 23.8 | 19.37 | 24 | -- | -- |
| 130.35 | 0.533 | 3.38 | -0.0587 | -- | -- | -- | -- | -0.0493 | -- | -- | -- | -- | -- |
| 129.48 | 0.532 | 3.38 | -- | 0.124 | -- | -- | -- | -0.0442 | 0.235 | -- | -- | -- | -- |
| 117.44 | 0.505 | 3.37 | -- | -- | 1.51 | -- | -- | 0.00728 | -- | 19.46 | 24 | -- | -- |
| 130.44 | 0.533 | 3.38 | -- | -- | -- | -- | -- | -0.0428 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 114.25 | temperature | 25.0 | 10 | < th | dose dependent | rect. | 22 | 15 |
| 41 | 114.88 | temperature | 15.0 | 1440 | > th | dose independent | rect. | 6 | 9 |
| 50 | 115.01 | temperature | 15.0 | 1440 | > th | dose independent | rect. | 6 | 19 |
| 59 | 115.13 | atmosphere | 1015.0 | 1440 | < th | dose independent | rect. | 1 | 5 |
| 64 | 115.29 | temperature | 15.0 | 1440 | > th | dose independent | rect. | 6 | 11 |
| 69 | 115.37 | precipitation | 0.1 | 1440 | < th | dose independent | rect. | 1 | 2 |
| 70 | 115.37 | precipitation | 0.1 | 1440 | < th | dose dependent | rect. | 1 | 2 |
| 72 | 115.41 | temperature | 15.0 | 1440 | > th | dose independent | rect. | 6 | 22 |
| 96 | 115.50 | temperature | 20.0 | 30 | < th | dose dependent | rect. | 3 | 22 |
| 124 | 115.69 | atmosphere | 1015.0 | 1440 | < th | dose independent | rect. | 24 | 1 |
| 151 | 115.85 | temperature | 15.0 | 1440 | > th | dose independent | rect. | 21 | 7 |
| 159 | 115.88 | temperature | 15.0 | 1440 | > th | dose independent | rect. | 6 | 7 |
| 171 | 115.91 | temperature | 20.0 | 30 | < th | dose dependent | sin | 6 | NA |
| 185 | 116.02 | atmosphere | 1015.0 | 1440 | < th | dose independent | rect. | 1 | 7 |
| 190 | 116.03 | precipitation | 0.1 | 1440 | > th | dose independent | rect. | 2 | 1 |
| 191 | 116.03 | precipitation | 0.1 | 1440 | > th | dose dependent | rect. | 2 | 1 |
| 227 | 116.11 | temperature | 15.0 | 1440 | > th | dose independent | rect. | 19 | 9 |
| 241 | 116.16 | temperature | 15.0 | 1440 | > th | dose independent | rect. | 11 | 1 |
| 242 | 116.16 | radiation | 20.0 | 4320 | < th | dose independent | rect. | 1 | 5 |
| 248 | 116.20 | temperature | 15.0 | 1440 | > th | dose independent | rect. | 6 | 5 |
| 267 | 116.26 | temperature | 15.0 | 1440 | > th | dose independent | rect. | 21 | 18 |
| 272 | 116.27 | temperature | 20.0 | 30 | < th | dose dependent | no | NA | NA |
| 273 | 116.27 | temperature | 20.0 | 30 | < th | dose dependent | rect. | 7 | 23 |
| 274 | 116.27 | temperature | 20.0 | 30 | < th | dose dependent | rect. | 9 | 23 |
| 275 | 116.27 | temperature | 20.0 | 30 | < th | dose dependent | rect. | 11 | 23 |
| 279 | 116.28 | temperature | 20.0 | 30 | < th | dose dependent | rect. | 5 | 23 |
| 280 | 116.29 | temperature | 15.0 | 1440 | > th | dose independent | rect. | 23 | 5 |
| 284 | 116.29 | temperature | 20.0 | 30 | < th | dose dependent | rect. | 9 | 21 |
| 294 | 116.32 | temperature | 15.0 | 1440 | > th | dose independent | rect. | 23 | 16 |
| 301 | 116.33 | temperature | 15.0 | 1440 | > th | dose independent | rect. | 19 | 20 |
| 317 | 116.35 | temperature | 20.0 | 30 | < th | dose dependent | rect. | 9 | 16 |
| 337 | 116.38 | temperature | 20.0 | 30 | < th | dose dependent | rect. | 11 | 21 |
| 366 | 116.44 | precipitation | 0.1 | 1440 | > th | dose independent | rect. | 8 | 2 |
| 367 | 116.44 | precipitation | 0.1 | 1440 | > th | dose dependent | rect. | 8 | 2 |
| 368 | 116.44 | temperature | 20.0 | 30 | < th | dose dependent | rect. | 11 | 14 |
| 381 | 116.46 | temperature | 15.0 | 1440 | > th | dose independent | rect. | 21 | 20 |
| 387 | 116.47 | temperature | 15.0 | 1440 | > th | dose independent | rect. | 19 | 22 |
| 388 | 116.47 | temperature | 15.0 | 1440 | > th | dose independent | rect. | 21 | 23 |
| 395 | 116.48 | atmosphere | 1015.0 | 1440 | < th | dose independent | rect. | 1 | 9 |
| 409 | 116.51 | temperature | 15.0 | 1440 | > th | dose independent | rect. | 6 | 14 |
| 431 | 116.56 | temperature | 15.0 | 1440 | > th | dose independent | rect. | 23 | 18 |
| 432 | 116.56 | temperature | 15.0 | 1440 | > th | dose independent | rect. | 8 | 20 |
| 433 | 116.56 | temperature | 15.0 | 1440 | > th | dose independent | rect. | 2 | 23 |
| 437 | 116.57 | humidity | 90.0 | 1440 | > th | dose dependent | rect. | 9 | 3 |
| 445 | 116.58 | temperature | 15.0 | 1440 | > th | dose independent | rect. | 23 | 21 |
| 451 | 116.59 | temperature | 15.0 | 1440 | > th | dose independent | rect. | 12 | 23 |
| 468 | 116.63 | temperature | 15.0 | 1440 | > th | dose independent | rect. | 19 | 18 |
| 470 | 116.64 | temperature | 15.0 | 1440 | > th | dose independent | rect. | 6 | 1 |
| 472 | 116.64 | temperature | 15.0 | 1440 | > th | dose independent | rect. | 21 | 16 |
| 478 | 116.65 | temperature | 15.0 | 1440 | > th | dose independent | rect. | 6 | 3 |
| 490 | 116.68 | precipitation | 0.1 | 1440 | > th | dose independent | rect. | 6 | 1 |
| 492 | 116.68 | temperature | 15.0 | 1440 | > th | dose independent | rect. | 8 | 5 |
| 496 | 116.68 | precipitation | 0.1 | 1440 | > th | dose dependent | rect. | 6 | 1 |
| 499 | 116.69 | temperature | 15.0 | 1440 | > th | dose independent | rect. | 8 | 7 |
| 516 | 116.73 | temperature | 15.0 | 1440 | > th | dose independent | rect. | 8 | 3 |
| 518 | 116.74 | temperature | 15.0 | 1440 | > th | dose independent | rect. | 23 | 23 |
| 537 | 116.78 | temperature | 15.0 | 1440 | > th | dose independent | rect. | 19 | 16 |
| 551 | 116.80 | temperature | 15.0 | 1440 | > th | dose independent | rect. | 16 | 23 |
| 573 | 116.87 | temperature | 20.0 | 720 | < th | dose dependent | rect. | 9 | 9 |
| 578 | 116.88 | temperature | 15.0 | 1440 | > th | dose independent | rect. | 21 | 14 |
| 580 | 116.88 | temperature | 20.0 | 720 | < th | dose dependent | rect. | 11 | 4 |
| 595 | 116.91 | temperature | 15.0 | 1440 | > th | dose independent | rect. | 14 | 23 |
| 597 | 116.92 | wind | 7.0 | 1440 | > th | dose independent | rect. | 7 | 1 |
| 600 | 116.92 | temperature | 15.0 | 1440 | > th | dose independent | rect. | 8 | 17 |
| 605 | 116.93 | temperature | 15.0 | 720 | > th | dose independent | rect. | 3 | 17 |
| 611 | 116.94 | temperature | 20.0 | 720 | < th | dose independent | rect. | 10 | 5 |
| 614 | 116.95 | humidity | 90.0 | 1440 | > th | dose independent | rect. | 9 | 1 |
| 626 | 116.99 | temperature | 20.0 | 720 | < th | dose independent | rect. | 11 | 3 |
| 631 | 117.00 | radiation | 1.0 | 1440 | > th | dose independent | rect. | 8 | 3 |
| 632 | 117.00 | temperature | 15.0 | 1440 | > th | dose independent | rect. | 8 | 23 |
| 635 | 117.01 | temperature | 15.0 | 1440 | < th | dose independent | rect. | 22 | 6 |
| 636 | 117.01 | temperature | 20.0 | 720 | < th | dose dependent | rect. | 12 | 1 |
| 640 | 117.02 | temperature | 15.0 | 1440 | > th | dose independent | no | NA | NA |
| 641 | 117.02 | humidity | 90.0 | 720 | > th | dose independent | rect. | 11 | 3 |
| 642 | 117.02 | temperature | 15.0 | 1440 | > th | dose independent | rect. | 10 | 23 |
| 648 | 117.04 | temperature | 15.0 | 1440 | < th | dose independent | sin | 10 | NA |
| 652 | 117.04 | temperature | 15.0 | 1440 | < th | dose independent | rect. | 20 | 10 |
| 653 | 117.04 | temperature | 15.0 | 1440 | < th | dose independent | rect. | 19 | 12 |
| 665 | 117.04 | temperature | 15.0 | 1440 | < th | dose independent | rect. | 2 | 20 |
| 694 | 117.05 | temperature | 15.0 | 1440 | > th | dose independent | sin | 11 | NA |
| 710 | 117.05 | temperature | 15.0 | 1440 | < th | dose dependent | rect. | 23 | 5 |
| 712 | 117.05 | temperature | 15.0 | 1440 | < th | dose dependent | rect. | 2 | 18 |
| 718 | 117.06 | temperature | 15.0 | 1440 | > th | dose independent | sin | 0 | NA |
| 719 | 117.06 | temperature | 15.0 | 1440 | < th | dose independent | no | NA | NA |
| 734 | 117.06 | temperature | 15.0 | 1440 | < th | dose independent | rect. | 9 | 22 |
| 742 | 117.06 | temperature | 15.0 | 1440 | < th | dose dependent | sin | 7 | NA |
| 764 | 117.07 | temperature | 15.0 | 1440 | < th | dose dependent | rect. | 22 | 13 |
| 779 | 117.08 | temperature | 15.0 | 1440 | < th | dose independent | rect. | 5 | 23 |
| 791 | 117.09 | radiation | 1.0 | 1440 | > th | dose independent | rect. | 8 | 1 |
| 810 | 117.10 | atmosphere | 1015.0 | 1440 | > th | dose independent | rect. | 24 | 1 |
| 857 | 117.11 | temperature | 15.0 | 720 | < th | dose dependent | rect. | 23 | 3 |
| 872 | 117.12 | radiation | 1.0 | 1440 | < th | dose independent | rect. | 8 | 1 |
| 873 | 117.12 | humidity | 90.0 | 1440 | > th | dose independent | rect. | 9 | 3 |
| 887 | 117.12 | temperature | 15.0 | 1440 | < th | dose dependent | sin | 23 | NA |
| 890 | 117.12 | radiation | 1.0 | 1440 | < th | dose dependent | rect. | 8 | 1 |
| 901 | 117.13 | temperature | 15.0 | 1440 | < th | dose independent | sin | 22 | NA |