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Os07g0178100

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Similar to ETO1-like protein 1 (Ethylene overproducer 1-like protein 1).


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 6.64 (0.0186) R2 : 0.644
β1 : -- (--) R2dD : -- R2D : --
β2 : 0.877 (0.0455) R2dC : 0.296 R2C : 0.211
β3 : 1.6 (0.0822) R2dE : 0.336 R2E : 0.322
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : -0.222 (0.041) R2dN8 : 0.0339 R2N8 : 0.0874
σ : 0.344
deviance : 54.51
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C
peak time of C : 9.46
E
wheather : temperature
threshold : 25.3
memory length : 111
response mode : < th
dose dependency : dose dependent
G
type of G : no
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = temperature, response mode = < th, dose dependency = dose dependent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
51.41 0.337 6.62 0.404 0.876 1.7 -0.159 -0.322 -0.145 9.63 25.48 114 -- --
51.57 0.334 6.62 0.355 0.882 1.73 -0.0901 -- -0.156 9.59 25.36 113 -- --
51.5 0.334 6.62 0.392 0.879 1.71 -- -0.26 -0.145 9.66 25.53 113 -- --
51.61 0.335 6.62 0.35 0.881 1.73 -- -- -0.158 9.62 25.37 113 -- --
76.82 0.408 6.62 0.638 -- 1.8 -- -1.21 -0.0828 -- 29.64 612 -- --
94.43 0.456 6.7 -0.0686 0.842 -- -0.219 -- -0.51 8.13 -- -- -- --
94.57 0.455 6.7 -0.0747 0.842 -- -- -- -0.51 8.14 -- -- -- --
78.18 0.412 6.64 0.425 -- 1.8 -- -- -0.118 -- 28.69 584 -- --
54.51 0.344 6.64 -- 0.877 1.6 -- -- -0.222 9.46 25.3 111 -- --
133.54 0.54 6.72 -0.0678 -- -- -- -- -0.5 -- -- -- -- --
94.72 0.455 6.7 -- 0.841 -- -- -- -0.502 8.15 -- -- -- --
82.19 0.422 6.66 -- -- 1.65 -- -- -0.203 -- 28.99 577 -- --
133.66 0.54 6.72 -- -- -- -- -- -0.493 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 51.11 temperature 25 90 < th dose dependent rect. 11 22
3 51.19 temperature 25 270 < th dose dependent rect. 9 22
4 51.29 temperature 10 270 > th dose dependent sin 10 NA
7 51.58 temperature 30 270 < th dose dependent sin 10 NA
8 51.61 temperature 25 90 < th dose dependent rect. 13 23
9 51.61 temperature 25 90 < th dose dependent rect. 23 23
11 51.68 temperature 25 90 < th dose dependent rect. 15 23
12 51.74 temperature 25 90 < th dose dependent no NA NA
17 51.96 temperature 25 90 < th dose dependent rect. 19 23
25 52.24 temperature 10 90 > th dose dependent sin 8 NA
27 52.35 temperature 30 90 < th dose dependent sin 8 NA
29 52.41 temperature 25 90 < th dose dependent rect. 21 23
34 52.54 temperature 25 90 < th dose dependent rect. 1 23
37 52.69 temperature 25 30 < th dose dependent rect. 3 23
64 53.07 temperature 25 30 < th dose dependent rect. 7 23
82 53.41 temperature 25 30 < th dose dependent rect. 5 23
217 55.83 temperature 30 270 < th dose dependent rect. 17 14
234 56.10 temperature 15 270 > th dose dependent rect. 16 21
546 59.20 temperature 25 720 < th dose dependent rect. 7 17
554 59.24 temperature 25 720 < th dose dependent rect. 9 16
660 59.96 temperature 15 90 > th dose dependent rect. 6 23
666 60.00 temperature 25 90 < th dose dependent rect. 23 16
695 60.29 temperature 25 90 < th dose dependent rect. 23 14
703 60.34 temperature 10 720 > th dose dependent rect. 15 13
715 60.45 temperature 25 720 < th dose dependent sin 18 NA
755 60.75 temperature 15 270 > th dose dependent rect. 21 14
759 60.77 temperature 10 720 > th dose dependent rect. 16 10
891 62.01 temperature 10 10 > th dose dependent no NA NA
915 62.14 temperature 10 720 > th dose dependent rect. 8 19
918 62.16 temperature 25 720 < th dose dependent rect. 15 10
978 62.44 temperature 15 10 > th dose dependent rect. 6 23