Os07g0177200
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Protein of unknown function UPF0005 family protein.
FiT-DB / Search/ Help/ Sample detail
|
Os07g0177200 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
|
Description : Protein of unknown function UPF0005 family protein.
|
|
log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
|
_____ |
|
__
Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 56.38 | 0.353 | 2.89 | 0.113 | 0.0895 | 0.135 | -0.175 | -0.241 | 0.198 | 10.3 | 24.82 | 7 | -- | -- |
| 56.63 | 0.353 | 2.9 | 0.037 | 0.0852 | 0.125 | -0.0946 | -- | 0.174 | 10.3 | 24.82 | 7 | -- | -- |
| 56.47 | 0.35 | 2.89 | 0.089 | 0.0909 | 0.137 | -- | -0.182 | 0.195 | 11.1 | 24.88 | 8 | -- | -- |
| 56.64 | 0.351 | 2.9 | 0.0385 | 0.0899 | 0.135 | -- | -- | 0.178 | 11.2 | 24.9 | 9 | -- | -- |
| 56.95 | 0.353 | 2.9 | 0.0767 | -- | 0.113 | -- | -0.162 | 0.18 | -- | 24.8 | 10 | -- | -- |
| 57.71 | 0.356 | 2.92 | 0.00906 | 0.0771 | -- | -0.258 | -- | 0.108 | 6.68 | -- | -- | -- | -- |
| 57.87 | 0.356 | 2.91 | 0.00532 | 0.0764 | -- | -- | -- | 0.109 | 7.15 | -- | -- | -- | -- |
| 57.08 | 0.352 | 2.9 | 0.0308 | -- | 0.11 | -- | -- | 0.166 | -- | 24.88 | 10 | -- | -- |
| 56.67 | 0.351 | 2.9 | -- | 0.0875 | 0.13 | -- | -- | 0.173 | 11.1 | 24.88 | 9 | -- | -- |
| 58.18 | 0.356 | 2.92 | 0.00675 | -- | -- | -- | -- | 0.111 | -- | -- | -- | -- | -- |
| 57.87 | 0.356 | 2.91 | -- | 0.0765 | -- | -- | -- | 0.109 | 7.15 | -- | -- | -- | -- |
| 57.1 | 0.352 | 2.9 | -- | -- | 0.108 | -- | -- | 0.162 | -- | 24.9 | 10 | -- | -- |
| 58.18 | 0.356 | 2.92 | -- | -- | -- | -- | -- | 0.11 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
|
Histogram 
|
Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 48.35 | wind | 1.0 | 10 | < th | dose dependent | rect. | 2 | 1 |
| 2 | 49.90 | wind | 1.0 | 10 | < th | dose independent | rect. | 1 | 2 |
| 10 | 51.17 | humidity | 80.0 | 10 | < th | dose dependent | rect. | 22 | 10 |
| 11 | 51.18 | humidity | 80.0 | 10 | < th | dose dependent | rect. | 5 | 3 |
| 16 | 51.18 | humidity | 70.0 | 90 | < th | dose dependent | rect. | 18 | 14 |
| 17 | 51.19 | wind | 7.0 | 30 | > th | dose independent | rect. | 17 | 1 |
| 18 | 51.19 | humidity | 70.0 | 30 | < th | dose independent | rect. | 18 | 14 |
| 20 | 51.19 | humidity | 80.0 | 10 | < th | dose dependent | rect. | 7 | 1 |
| 50 | 51.22 | atmosphere | 1005.0 | 90 | > th | dose dependent | rect. | 1 | 2 |
| 65 | 51.25 | humidity | 70.0 | 10 | < th | dose independent | rect. | 7 | 1 |
| 136 | 51.25 | radiation | 30.0 | 30 | > th | dose dependent | rect. | 7 | 2 |
| 207 | 51.26 | radiation | 20.0 | 90 | > th | dose independent | rect. | 6 | 1 |
| 655 | 51.87 | atmosphere | 1005.0 | 30 | > th | dose dependent | rect. | 17 | 1 |
| 685 | 52.09 | humidity | 90.0 | 10 | > th | dose dependent | rect. | 2 | 1 |
| 715 | 52.21 | atmosphere | 1005.0 | 30 | > th | dose dependent | rect. | 7 | 1 |
| 763 | 52.53 | temperature | 25.0 | 30 | < th | dose dependent | rect. | 2 | 1 |
| 794 | 52.70 | wind | 7.0 | 30 | > th | dose dependent | rect. | 17 | 1 |
| 836 | 53.02 | radiation | 1.0 | 43200 | < th | dose dependent | rect. | 3 | 1 |
| 853 | 53.15 | radiation | 30.0 | 30 | < th | dose independent | sin | 11 | NA |
| 860 | 53.17 | temperature | 25.0 | 90 | < th | dose dependent | rect. | 16 | 1 |
| 864 | 53.19 | atmosphere | 1005.0 | 10 | > th | dose independent | rect. | 2 | 1 |
| 866 | 53.20 | humidity | 90.0 | 10 | > th | dose independent | rect. | 2 | 1 |
| 878 | 53.25 | temperature | 10.0 | 10 | > th | dose independent | rect. | 2 | 1 |
| 880 | 53.25 | temperature | 30.0 | 10 | < th | dose independent | rect. | 2 | 1 |
| 881 | 53.25 | humidity | 50.0 | 10 | > th | dose independent | rect. | 2 | 1 |
| 885 | 53.25 | atmosphere | 995.0 | 10 | > th | dose independent | rect. | 2 | 1 |
| 886 | 53.25 | atmosphere | 1010.0 | 10 | < th | dose independent | rect. | 2 | 1 |
| 888 | 53.25 | radiation | 1.0 | 10 | < th | dose independent | rect. | 2 | 1 |
| 893 | 53.25 | precipitation | 0.1 | 10 | < th | dose independent | rect. | 2 | 1 |
| 895 | 53.25 | temperature | 10.0 | 10 | > th | dose independent | rect. | 3 | 23 |
| 896 | 53.25 | radiation | 1.0 | 10 | < th | dose dependent | rect. | 2 | 1 |
| 901 | 53.25 | precipitation | 0.1 | 10 | < th | dose dependent | rect. | 2 | 1 |
| 935 | 53.35 | temperature | 20.0 | 30 | > th | dose dependent | rect. | 2 | 1 |
| 940 | 53.36 | temperature | 25.0 | 90 | > th | dose independent | rect. | 2 | 1 |
| 945 | 53.36 | temperature | 10.0 | 10 | > th | dose dependent | rect. | 2 | 1 |
| 965 | 53.37 | wind | 9.0 | 10 | < th | dose independent | rect. | 3 | 23 |