Os07g0176600
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to Kinase-like protein.
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Os07g0176600 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to Kinase-like protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 182.53 | 0.635 | 4.76 | -0.0542 | 1.69 | 0.187 | 0.98 | 7.05 | 0.181 | 7.79 | 29.13 | 1560 | -- | -- |
| 188.11 | 0.639 | 4.92 | -1.29 | 1.74 | 1.02 | 0.865 | -- | 0.00592 | 7.81 | 27.01 | 3253 | -- | -- |
| 185.25 | 0.634 | 4.76 | -0.0418 | 1.69 | 0.176 | -- | 7.15 | 0.174 | 7.73 | 29.28 | 1559 | -- | -- |
| 184.49 | 0.633 | 4.97 | -1.34 | 1.71 | 0.927 | -- | -- | -0.105 | 7.7 | 26.6 | 5724 | -- | -- |
| 337.66 | 0.856 | 4.78 | 0.243 | -- | -0.00342 | -- | 7.65 | 0.209 | -- | 29.14 | 1466 | -- | -- |
| 220.58 | 0.696 | 4.93 | -1.01 | 1.7 | -- | 0.963 | -- | -0.0222 | 7.61 | -- | -- | -- | -- |
| 223.15 | 0.7 | 4.93 | -0.983 | 1.7 | -- | -- | -- | -0.0241 | 7.56 | -- | -- | -- | -- |
| 333.93 | 0.851 | 4.94 | -1.24 | -- | 0.911 | -- | -- | 0.117 | -- | 29.6 | 5762 | -- | -- |
| 224.78 | 0.698 | 4.88 | -- | 1.66 | 0.688 | -- | -- | 0.209 | 7.73 | 31.21 | 5756 | -- | -- |
| 378.68 | 0.909 | 4.97 | -0.958 | -- | -- | -- | -- | 0.00207 | -- | -- | -- | -- | -- |
| 248.61 | 0.738 | 4.91 | -- | 1.7 | -- | -- | -- | 0.0854 | 7.6 | -- | -- | -- | -- |
| 366.08 | 0.891 | 4.85 | -- | -- | 0.822 | -- | -- | 0.276 | -- | 33.4 | 7078 | -- | -- |
| 402.89 | 0.937 | 4.95 | -- | -- | -- | -- | -- | 0.108 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 172.86 | wind | 3 | 43200 | < th | dose independent | rect. | 3 | 1 |
| 2 | 172.86 | wind | 3 | 43200 | > th | dose independent | rect. | 3 | 2 |
| 5 | 172.96 | humidity | 80 | 14400 | < th | dose independent | rect. | 16 | 4 |
| 6 | 172.98 | humidity | 80 | 14400 | > th | dose independent | rect. | 16 | 4 |
| 8 | 173.04 | humidity | 80 | 14400 | > th | dose independent | rect. | 18 | 1 |
| 25 | 174.10 | wind | 3 | 43200 | > th | dose dependent | rect. | 5 | 3 |
| 33 | 174.38 | wind | 5 | 43200 | > th | dose dependent | rect. | 11 | 1 |
| 34 | 174.38 | wind | 5 | 43200 | < th | dose dependent | rect. | 3 | 2 |
| 44 | 174.75 | wind | 3 | 43200 | > th | dose dependent | rect. | 5 | 1 |
| 55 | 175.23 | wind | 5 | 43200 | > th | dose independent | rect. | 11 | 1 |
| 64 | 175.40 | wind | 5 | 43200 | < th | dose independent | rect. | 11 | 1 |
| 69 | 175.48 | wind | 3 | 43200 | > th | dose dependent | rect. | 4 | 6 |
| 78 | 175.57 | humidity | 70 | 14400 | < th | dose independent | rect. | 14 | 17 |
| 85 | 175.65 | wind | 1 | 43200 | > th | dose dependent | rect. | 3 | 2 |
| 89 | 175.70 | humidity | 70 | 14400 | > th | dose independent | rect. | 14 | 17 |
| 107 | 175.78 | temperature | 30 | 14400 | < th | dose independent | rect. | 14 | 1 |
| 111 | 175.78 | temperature | 30 | 14400 | > th | dose dependent | rect. | 13 | 2 |
| 150 | 175.91 | temperature | 30 | 14400 | > th | dose independent | rect. | 14 | 1 |
| 152 | 175.91 | humidity | 90 | 14400 | < th | dose dependent | rect. | 15 | 8 |
| 156 | 175.93 | temperature | 30 | 14400 | < th | dose independent | rect. | 11 | 5 |
| 158 | 175.94 | temperature | 30 | 14400 | > th | dose independent | rect. | 11 | 5 |
| 161 | 175.95 | humidity | 70 | 14400 | > th | dose dependent | rect. | 18 | 1 |
| 162 | 175.95 | humidity | 80 | 14400 | < th | dose dependent | rect. | 16 | 1 |
| 177 | 175.99 | humidity | 90 | 43200 | < th | dose independent | rect. | 10 | 1 |
| 198 | 176.01 | humidity | 70 | 14400 | > th | dose independent | sin | 15 | NA |
| 203 | 176.01 | wind | 3 | 43200 | > th | dose dependent | rect. | 3 | 9 |
| 232 | 176.07 | humidity | 70 | 14400 | < th | dose independent | sin | 15 | NA |
| 242 | 176.08 | humidity | 60 | 14400 | > th | dose dependent | rect. | 12 | 12 |
| 249 | 176.11 | wind | 9 | 43200 | < th | dose independent | rect. | 10 | 1 |
| 291 | 176.22 | temperature | 30 | 14400 | < th | dose independent | rect. | 24 | 16 |
| 306 | 176.23 | temperature | 30 | 14400 | < th | dose independent | rect. | 19 | 21 |
| 444 | 176.49 | wind | 3 | 43200 | > th | dose independent | rect. | 3 | 6 |
| 472 | 176.52 | wind | 9 | 43200 | < th | dose dependent | rect. | 2 | 7 |
| 510 | 176.62 | temperature | 30 | 14400 | < th | dose independent | sin | 1 | NA |
| 576 | 176.68 | temperature | 30 | 14400 | > th | dose independent | sin | 1 | NA |
| 602 | 176.70 | humidity | 60 | 14400 | > th | dose dependent | sin | 17 | NA |
| 622 | 176.72 | temperature | 20 | 43200 | > th | dose independent | rect. | 19 | 1 |
| 636 | 176.73 | temperature | 30 | 14400 | < th | dose independent | rect. | 10 | 15 |
| 786 | 176.80 | temperature | 30 | 14400 | < th | dose independent | rect. | 14 | 23 |
| 830 | 176.82 | temperature | 30 | 14400 | < th | dose independent | rect. | 6 | 21 |
| 847 | 176.83 | temperature | 30 | 14400 | < th | dose independent | no | NA | NA |
| 918 | 176.85 | temperature | 30 | 14400 | > th | dose dependent | sin | 22 | NA |
| 927 | 176.86 | temperature | 30 | 14400 | > th | dose independent | rect. | 14 | 23 |
| 956 | 176.89 | temperature | 30 | 14400 | > th | dose independent | no | NA | NA |