Os07g0173100
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : HSP20-like chaperone domain containing protein.
FiT-DB / Search/ Help/ Sample detail
|
Os07g0173100 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
|
Description : HSP20-like chaperone domain containing protein.
|
|
log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
|
_____ |
|
__
Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 106.68 | 0.485 | 6.94 | 0.163 | 2.45 | 1.63 | 0.455 | -1.52 | -0.121 | 14.1 | 24.74 | 97 | -- | -- |
| 107.52 | 0.483 | 6.91 | 0.358 | 2.47 | 1.5 | 0.383 | -- | -0.0521 | 14.1 | 24.75 | 107 | -- | -- |
| 107.26 | 0.482 | 6.93 | 0.233 | 2.44 | 1.63 | -- | -1.01 | -0.109 | 14.1 | 24.65 | 108 | -- | -- |
| 107.63 | 0.483 | 6.92 | 0.357 | 2.46 | 1.52 | -- | -- | -0.0807 | 14.1 | 24.51 | 122 | -- | -- |
| 323.59 | 0.838 | 7.03 | -0.406 | -- | 4.1 | -- | -3.1 | -0.535 | -- | 24.2 | 23 | -- | -- |
| 143.7 | 0.562 | 6.89 | 0.6 | 3.05 | -- | 0.737 | -- | 0.0684 | 14.4 | -- | -- | -- | -- |
| 145.66 | 0.565 | 6.89 | 0.619 | 3.05 | -- | -- | -- | 0.0727 | 14.4 | -- | -- | -- | -- |
| 330.82 | 0.847 | 7.01 | -0.0833 | -- | 3.85 | -- | -- | -0.418 | -- | 24.2 | 21 | -- | -- |
| 110.78 | 0.49 | 6.93 | -- | 2.41 | 1.62 | -- | -- | -0.147 | 14 | 24.2 | 122 | -- | -- |
| 695.01 | 1.23 | 6.91 | 0.49 | -- | -- | -- | -- | -0.00277 | -- | -- | -- | -- | -- |
| 155.77 | 0.584 | 6.91 | -- | 3.04 | -- | -- | -- | 0.00371 | 14.4 | -- | -- | -- | -- |
| 330.98 | 0.847 | 7 | -- | -- | 3.84 | -- | -- | -0.407 | -- | 24.2 | 21 | -- | -- |
| 701.35 | 1.24 | 6.92 | -- | -- | -- | -- | -- | -0.0571 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
|
Histogram 
|
Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 89.98 | temperature | 10 | 270 | > th | dose dependent | rect. | 4 | 12 |
| 27 | 97.66 | temperature | 30 | 270 | < th | dose dependent | rect. | 7 | 13 |
| 28 | 97.72 | temperature | 10 | 270 | > th | dose dependent | rect. | 19 | 22 |
| 46 | 99.23 | temperature | 30 | 90 | < th | dose dependent | rect. | 9 | 12 |
| 56 | 99.62 | temperature | 10 | 270 | > th | dose dependent | sin | 1 | NA |
| 60 | 99.79 | temperature | 20 | 270 | > th | dose dependent | sin | 1 | NA |
| 63 | 99.91 | temperature | 15 | 30 | > th | dose dependent | rect. | 23 | 19 |
| 69 | 100.12 | temperature | 25 | 270 | > th | dose dependent | rect. | 21 | 19 |
| 87 | 100.66 | temperature | 10 | 90 | > th | dose dependent | sin | 22 | NA |
| 93 | 100.94 | temperature | 20 | 90 | > th | dose dependent | sin | 22 | NA |
| 157 | 102.19 | temperature | 10 | 720 | > th | dose dependent | rect. | 4 | 5 |
| 166 | 102.25 | temperature | 25 | 90 | > th | dose dependent | rect. | 19 | 23 |
| 172 | 102.37 | temperature | 15 | 720 | > th | dose dependent | rect. | 5 | 2 |
| 231 | 103.49 | temperature | 30 | 270 | < th | dose dependent | sin | 0 | NA |
| 315 | 104.45 | temperature | 30 | 270 | < th | dose independent | rect. | 7 | 13 |
| 437 | 105.60 | temperature | 25 | 90 | > th | dose dependent | rect. | 11 | 23 |
| 545 | 106.56 | temperature | 25 | 30 | > th | dose dependent | rect. | 8 | 23 |
| 550 | 106.65 | temperature | 25 | 90 | > th | dose dependent | rect. | 4 | 21 |
| 586 | 106.77 | temperature | 25 | 90 | > th | dose dependent | no | NA | NA |
| 607 | 106.83 | temperature | 30 | 90 | < th | dose dependent | rect. | 11 | 10 |
| 658 | 107.14 | temperature | 10 | 270 | > th | dose dependent | rect. | 10 | 14 |
| 814 | 108.06 | radiation | 1 | 270 | < th | dose independent | rect. | 8 | 11 |
| 835 | 108.21 | temperature | 30 | 720 | < th | dose dependent | rect. | 7 | 4 |
| 923 | 108.94 | radiation | 1 | 270 | < th | dose dependent | rect. | 7 | 12 |
| 938 | 109.07 | radiation | 1 | 270 | < th | dose independent | rect. | 14 | 5 |
| 959 | 109.20 | temperature | 30 | 270 | < th | dose independent | rect. | 24 | 21 |
| 971 | 109.28 | radiation | 1 | 30 | < th | dose dependent | sin | 18 | NA |