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Os07g0168300

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Similar to Glutathione S-transferase GST 40 (EC 2.5.1.18).


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 10.3 (0.0269) R2 : 0.907
β1 : -- (--) R2dD : -- R2D : --
β2 : 5.85 (0.0889) R2dC : 1.43 R2C : 0.397
β3 : -3.44 (0.0883) R2dE : 0.498 R2E : -0.519
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.376 (0.0566) R2dN8 : 0.0116 R2N8 : -0.00293
σ : 0.505
deviance : 117.55
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_____
C
peak time of C : 18.3
E
wheather : temperature
threshold : 14.7
memory length : 312
response mode : > th
dose dependency : dose independent
G
type of G : rect.
peak or start time of G : 15.6
open length of G : 6.53

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Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = temperature, response mode = > th, dose dependency = dose independent, type of G = rect.)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
109.21 0.491 10.3 -0.606 5.7 -3.26 -0.153 -0.138 0.313 18.2 14.64 286 15.9 6.22
109.04 0.486 10.3 -0.607 5.71 -3.29 -0.235 -- 0.312 18.2 14.62 291 15.9 6.22
108.78 0.486 10.3 -0.618 5.66 -3.22 -- -0.151 0.312 18.2 14.63 300 15.8 6.28
108.34 0.485 10.3 -0.591 5.75 -3.38 -- -- 0.309 18.2 14.7 309 15.7 6.38
144.99 0.561 10.2 -0.563 -- -4.34 -- 0.0262 0.237 -- -0.9721 5247 17.3 6.28
232.1 0.714 10.2 -0.609 4.32 -- -0.119 -- 0.311 16.3 -- -- -- --
232.14 0.713 10.2 -0.61 4.32 -- -- -- 0.31 16.3 -- -- -- --
132.98 0.537 10.2 -0.71 -- -4.49 -- -- 0.303 -- -0.6263 5307 16.8 5.75
117.55 0.505 10.3 -- 5.85 -3.44 -- -- 0.376 18.3 14.7 312 15.6 6.53
1237.61 1.64 10.2 -0.781 -- -- -- -- 0.196 -- -- -- -- --
241.94 0.728 10.2 -- 4.33 -- -- -- 0.378 16.3 -- -- -- --
144.64 0.56 10.2 -- -- -4.52 -- -- 0.301 -- -0.6787 5306 16.9 5.67
1253.71 1.65 10.2 -- -- -- -- -- 0.282 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 113.29 temperature 15.0 270 > th dose independent rect. 16 6
2 113.44 wind 9.0 270 < th dose independent rect. 16 6
3 113.68 wind 9.0 270 < th dose independent rect. 17 17
4 113.95 precipitation 0.1 270 < th dose independent rect. 10 7
5 113.95 precipitation 0.1 270 < th dose dependent rect. 10 7
6 113.97 wind 1.0 270 > th dose independent rect. 10 7
7 114.20 temperature 10.0 270 > th dose independent rect. 10 7
8 114.20 atmosphere 1015.0 270 < th dose independent rect. 10 7
9 114.20 temperature 10.0 270 > th dose independent rect. 17 17
10 114.56 radiation 40.0 270 < th dose dependent rect. 16 6
12 114.69 radiation 40.0 270 < th dose independent rect. 16 6
13 114.69 temperature 10.0 270 > th dose independent rect. 22 18
14 114.72 radiation 20.0 270 < th dose independent rect. 16 6
16 114.82 precipitation 0.1 270 < th dose independent rect. 22 18
17 114.82 precipitation 0.1 270 < th dose dependent rect. 22 18
19 116.22 wind 9.0 270 < th dose independent rect. 16 19
21 116.54 wind 1.0 270 > th dose independent rect. 11 5
22 116.67 atmosphere 995.0 270 > th dose independent rect. 17 17
23 116.78 radiation 1.0 270 > th dose independent rect. 10 7
24 116.78 humidity 50.0 270 > th dose independent rect. 17 17
25 116.87 wind 9.0 270 < th dose independent rect. 6 15
27 117.56 temperature 15.0 270 > th dose independent rect. 16 19
29 117.86 temperature 10.0 270 > th dose independent rect. 11 5
30 117.86 atmosphere 1015.0 270 < th dose independent rect. 11 5
32 117.92 precipitation 0.1 270 < th dose independent rect. 11 5
33 117.92 precipitation 0.1 270 < th dose dependent rect. 11 5
34 118.27 atmosphere 995.0 270 > th dose independent rect. 16 6
36 118.32 atmosphere 1015.0 270 < th dose independent rect. 16 6
37 118.36 temperature 20.0 270 > th dose independent rect. 11 5
38 118.48 wind 9.0 270 < th dose independent rect. 22 18
40 119.09 radiation 20.0 270 < th dose dependent rect. 21 9
41 119.12 atmosphere 995.0 270 > th dose independent rect. 22 18
42 119.16 wind 9.0 270 < th dose independent rect. 10 7
43 119.20 precipitation 0.1 270 < th dose independent rect. 21 9
44 119.20 precipitation 0.1 270 < th dose dependent rect. 21 9
46 119.29 precipitation 0.1 270 < th dose independent rect. 11 16
47 119.29 precipitation 0.1 270 < th dose dependent rect. 11 16
49 119.48 wind 1.0 270 > th dose independent rect. 16 6
58 120.20 temperature 10.0 270 > th dose independent rect. 21 9
59 120.20 temperature 30.0 270 < th dose independent rect. 21 9
60 120.20 humidity 50.0 270 > th dose independent rect. 21 9
63 120.20 atmosphere 995.0 270 > th dose independent rect. 21 9
64 120.20 radiation 20.0 270 < th dose independent rect. 21 9
67 120.20 temperature 10.0 270 > th dose independent rect. 6 15
68 120.27 atmosphere 1015.0 270 < th dose independent rect. 6 15
69 120.30 wind 9.0 270 < th dose independent rect. 21 9
72 120.65 radiation 1.0 270 < th dose independent rect. 21 9
76 120.97 atmosphere 995.0 270 > th dose independent rect. 11 5
78 121.02 wind 9.0 270 < th dose independent rect. 11 5
80 121.26 radiation 1.0 270 > th dose independent rect. 11 5
85 121.51 atmosphere 995.0 270 > th dose independent rect. 16 19
90 121.65 precipitation 0.1 270 < th dose independent rect. 16 6
91 121.65 precipitation 0.1 270 < th dose dependent rect. 16 6
93 121.96 temperature 15.0 270 > th dose independent rect. 3 8
94 122.04 wind 9.0 270 < th dose independent rect. 3 8
95 122.07 atmosphere 995.0 270 > th dose independent rect. 10 7
100 122.21 atmosphere 995.0 270 > th dose independent rect. 3 8
101 122.21 atmosphere 1015.0 270 < th dose independent rect. 3 8
102 122.21 temperature 10.0 270 > th dose independent rect. 11 16
128 123.07 radiation 40.0 270 < th dose dependent rect. 17 4
137 123.20 precipitation 0.1 270 < th dose independent rect. 17 17
138 123.20 precipitation 0.1 270 < th dose dependent rect. 17 17
140 123.31 radiation 40.0 270 < th dose independent rect. 17 17
141 123.35 precipitation 0.1 270 < th dose independent rect. 3 8
142 123.35 precipitation 0.1 270 < th dose dependent rect. 3 8
146 123.54 humidity 50.0 270 > th dose independent rect. 3 8
154 123.83 radiation 1.0 270 < th dose dependent rect. 21 17
156 123.99 atmosphere 1015.0 270 < th dose independent rect. 17 4
158 124.14 atmosphere 1015.0 270 < th dose independent rect. 22 18
160 124.24 humidity 50.0 270 > th dose independent rect. 11 5
169 124.67 wind 1.0 270 > th dose independent rect. 11 16
174 124.83 radiation 1.0 270 < th dose dependent rect. 21 12
175 124.84 atmosphere 995.0 270 > th dose independent rect. 17 4
206 125.42 humidity 50.0 270 > th dose independent rect. 17 4
218 125.78 humidity 90.0 270 < th dose independent rect. 11 5
234 126.50 precipitation 0.1 270 < th dose independent rect. 16 19
235 126.50 precipitation 0.1 270 < th dose dependent rect. 16 19
236 126.53 humidity 50.0 270 > th dose independent rect. 22 18
264 128.21 wind 1.0 270 > th dose dependent rect. 11 5
269 128.48 radiation 1.0 270 < th dose independent rect. 21 17
271 128.60 humidity 90.0 270 < th dose independent rect. 10 7
274 128.64 temperature 10.0 270 > th dose dependent rect. 11 5
279 128.75 temperature 20.0 270 > th dose independent rect. 12 3
286 129.10 precipitation 0.1 270 < th dose independent rect. 6 15
287 129.10 precipitation 0.1 270 < th dose dependent rect. 6 15
289 129.24 wind 9.0 270 < th dose independent rect. 11 16
300 129.59 radiation 1.0 270 < th dose independent rect. 21 12
319 130.10 wind 9.0 270 < th dose dependent rect. 17 4
320 130.14 wind 9.0 270 < th dose dependent rect. 16 6
321 130.20 humidity 50.0 270 > th dose independent rect. 10 7
327 130.57 atmosphere 1015.0 270 < th dose independent rect. 17 17
366 132.18 atmosphere 1015.0 270 < th dose independent rect. 16 19
413 133.92 wind 1.0 270 > th dose dependent rect. 12 3
418 134.11 atmosphere 995.0 270 > th dose independent rect. 5 16
505 136.25 humidity 90.0 270 < th dose independent rect. 12 3
546 136.92 temperature 15.0 10 > th dose independent rect. 19 17
547 136.96 wind 9.0 10 < th dose independent rect. 19 17
551 137.12 temperature 30.0 270 < th dose independent rect. 17 17
593 137.89 wind 1.0 270 > th dose independent rect. 22 7
597 137.99 temperature 10.0 270 > th dose dependent rect. 17 5
603 138.16 radiation 40.0 270 < th dose dependent rect. 17 16
637 138.68 precipitation 0.1 10 < th dose independent rect. 12 7
638 138.68 precipitation 0.1 10 < th dose dependent rect. 12 7
665 138.84 atmosphere 995.0 270 > th dose dependent rect. 11 5
666 138.85 temperature 10.0 10 > th dose independent rect. 12 7
668 138.85 atmosphere 1015.0 10 < th dose independent rect. 12 7
670 138.85 atmosphere 995.0 10 > th dose independent rect. 19 17
674 138.87 radiation 1.0 90 < th dose dependent sin 18 NA
709 139.47 wind 1.0 10 > th dose independent rect. 12 7
713 139.48 atmosphere 995.0 270 > th dose independent rect. 11 16
781 140.49 temperature 30.0 270 < th dose independent rect. 3 8
799 140.91 radiation 1.0 90 > th dose independent rect. 12 17
823 141.10 wind 1.0 270 > th dose independent rect. 23 17
831 141.21 temperature 10.0 1440 > th dose independent rect. 13 6
835 141.21 wind 9.0 10 < th dose independent rect. 12 7
836 141.21 temperature 10.0 1440 > th dose independent rect. 19 18
839 141.21 atmosphere 995.0 1440 > th dose independent rect. 19 18
842 141.24 temperature 10.0 90 > th dose dependent rect. 18 18
883 142.17 humidity 50.0 90 > th dose dependent rect. 18 5
905 142.52 temperature 30.0 270 < th dose independent rect. 17 4
917 142.64 atmosphere 995.0 270 > th dose dependent rect. 12 3
922 142.73 radiation 1.0 270 < th dose independent rect. 6 15
923 142.84 radiation 1.0 270 < th dose dependent rect. 6 15
950 143.22 wind 9.0 270 < th dose dependent rect. 18 2
969 143.59 humidity 50.0 10 > th dose independent rect. 19 17
978 143.75 wind 1.0 270 > th dose independent rect. 6 15
980 143.88 radiation 1.0 90 < th dose independent sin 18 NA
987 143.94 temperature 10.0 10 > th dose dependent rect. 19 17