Os07g0167300
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os07g0167300 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 35.13 | 0.278 | 11 | 0.513 | 0.512 | -1.03 | -0.671 | 0.89 | 0.0276 | 17.7 | 26.35 | 5788 | -- | -- |
| 35.45 | 0.277 | 11 | 0.323 | 0.516 | -1 | -0.672 | -- | 0.0216 | 17.7 | 24.92 | 5790 | -- | -- |
| 36.21 | 0.28 | 11 | 0.521 | 0.517 | -1.02 | -- | 0.934 | 0.0266 | 17.7 | 26.45 | 5826 | -- | -- |
| 36.5 | 0.281 | 11 | 0.312 | 0.511 | -0.988 | -- | -- | 0.0145 | 17.9 | 24.98 | 5775 | -- | -- |
| 48.86 | 0.326 | 11 | 0.552 | -- | -1.07 | -- | 1.17 | -0.0244 | -- | 27.02 | 5657 | -- | -- |
| 71.41 | 0.396 | 11 | -0.071 | 0.555 | -- | -0.588 | -- | -0.102 | 17.6 | -- | -- | -- | -- |
| 72.26 | 0.398 | 11 | -0.0685 | 0.551 | -- | -- | -- | -0.105 | 17.6 | -- | -- | -- | -- |
| 49.16 | 0.327 | 11 | 0.248 | -- | -0.948 | -- | -- | -0.0865 | -- | 26.86 | 5652 | -- | -- |
| 38.44 | 0.289 | 11 | -- | 0.495 | -0.892 | -- | -- | -0.14 | 18.2 | 26.6 | 5555 | -- | -- |
| 88.05 | 0.438 | 11 | -0.0862 | -- | -- | -- | -- | -0.118 | -- | -- | -- | -- | -- |
| 72.39 | 0.398 | 11 | -- | 0.552 | -- | -- | -- | -0.0972 | 17.6 | -- | -- | -- | -- |
| 50.58 | 0.331 | 11 | -- | -- | -0.89 | -- | -- | -0.138 | -- | 27.55 | 5652 | -- | -- |
| 88.25 | 0.438 | 11 | -- | -- | -- | -- | -- | -0.108 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 35.49 | temperature | 20.0 | 4320 | > th | dose dependent | rect. | 6 | 5 |
| 4 | 35.59 | temperature | 20.0 | 4320 | > th | dose dependent | rect. | 7 | 2 |
| 10 | 35.67 | temperature | 25.0 | 4320 | < th | dose independent | rect. | 6 | 4 |
| 12 | 35.76 | humidity | 90.0 | 43200 | > th | dose independent | rect. | 9 | 4 |
| 21 | 35.88 | humidity | 90.0 | 43200 | < th | dose independent | rect. | 10 | 1 |
| 29 | 35.98 | temperature | 25.0 | 4320 | > th | dose independent | rect. | 6 | 4 |
| 30 | 36.00 | humidity | 90.0 | 43200 | > th | dose independent | rect. | 10 | 1 |
| 44 | 36.15 | temperature | 10.0 | 4320 | > th | dose dependent | rect. | 7 | 2 |
| 45 | 36.16 | temperature | 20.0 | 43200 | > th | dose independent | rect. | 19 | 1 |
| 47 | 36.18 | radiation | 30.0 | 14400 | > th | dose independent | rect. | 16 | 16 |
| 51 | 36.21 | temperature | 30.0 | 4320 | < th | dose dependent | rect. | 7 | 2 |
| 57 | 36.23 | temperature | 30.0 | 4320 | < th | dose dependent | rect. | 6 | 4 |
| 72 | 36.30 | wind | 5.0 | 43200 | > th | dose dependent | rect. | 9 | 3 |
| 98 | 36.43 | radiation | 40.0 | 14400 | < th | dose dependent | rect. | 17 | 12 |
| 101 | 36.44 | wind | 5.0 | 43200 | > th | dose dependent | rect. | 5 | 7 |
| 117 | 36.50 | humidity | 90.0 | 43200 | < th | dose independent | rect. | 10 | 3 |
| 118 | 36.50 | wind | 7.0 | 43200 | < th | dose independent | rect. | 5 | 6 |
| 126 | 36.52 | temperature | 30.0 | 14400 | > th | dose independent | rect. | 15 | 3 |
| 128 | 36.52 | temperature | 20.0 | 4320 | > th | dose dependent | sin | 4 | NA |
| 134 | 36.53 | temperature | 30.0 | 14400 | < th | dose independent | rect. | 15 | 12 |
| 140 | 36.54 | temperature | 30.0 | 14400 | < th | dose independent | rect. | 15 | 10 |
| 152 | 36.55 | temperature | 30.0 | 14400 | < th | dose independent | rect. | 15 | 4 |
| 158 | 36.55 | temperature | 30.0 | 14400 | < th | dose independent | rect. | 15 | 7 |
| 172 | 36.55 | humidity | 90.0 | 43200 | > th | dose dependent | rect. | 18 | 1 |
| 175 | 36.55 | radiation | 20.0 | 14400 | < th | dose dependent | rect. | 17 | 2 |
| 183 | 36.56 | wind | 5.0 | 43200 | > th | dose dependent | rect. | 3 | 11 |
| 191 | 36.57 | radiation | 1.0 | 14400 | > th | dose dependent | rect. | 17 | 12 |
| 195 | 36.58 | radiation | 1.0 | 14400 | > th | dose dependent | rect. | 17 | 2 |
| 235 | 36.62 | radiation | 30.0 | 14400 | > th | dose independent | rect. | 7 | 1 |
| 265 | 36.66 | temperature | 30.0 | 14400 | < th | dose independent | sin | 13 | NA |
| 272 | 36.69 | temperature | 30.0 | 14400 | > th | dose independent | sin | 13 | NA |
| 277 | 36.69 | temperature | 25.0 | 14400 | > th | dose dependent | rect. | 16 | 14 |
| 313 | 36.73 | wind | 5.0 | 43200 | > th | dose dependent | rect. | 24 | 14 |
| 369 | 36.78 | temperature | 25.0 | 14400 | > th | dose dependent | rect. | 16 | 8 |
| 401 | 36.84 | wind | 7.0 | 43200 | > th | dose independent | rect. | 5 | 6 |
| 436 | 36.88 | wind | 7.0 | 43200 | < th | dose independent | rect. | 9 | 2 |
| 458 | 36.91 | temperature | 25.0 | 43200 | < th | dose dependent | rect. | 12 | 1 |
| 465 | 36.92 | humidity | 90.0 | 43200 | > th | dose dependent | rect. | 9 | 2 |
| 509 | 36.98 | wind | 7.0 | 43200 | < th | dose independent | rect. | 8 | 4 |
| 542 | 37.03 | wind | 5.0 | 43200 | > th | dose independent | rect. | 9 | 3 |
| 559 | 37.03 | temperature | 25.0 | 14400 | > th | dose dependent | sin | 13 | NA |
| 562 | 37.04 | temperature | 20.0 | 43200 | < th | dose independent | rect. | 19 | 1 |
| 566 | 37.04 | temperature | 25.0 | 14400 | > th | dose dependent | rect. | 17 | 3 |
| 654 | 37.13 | temperature | 20.0 | 43200 | > th | dose independent | rect. | 12 | 10 |
| 661 | 37.13 | wind | 5.0 | 43200 | > th | dose dependent | rect. | 20 | 18 |
| 679 | 37.15 | temperature | 25.0 | 1440 | > th | dose dependent | rect. | 16 | 21 |
| 736 | 37.19 | wind | 5.0 | 43200 | > th | dose dependent | sin | 6 | NA |
| 739 | 37.19 | humidity | 90.0 | 43200 | > th | dose dependent | rect. | 9 | 14 |
| 795 | 37.23 | humidity | 90.0 | 43200 | > th | dose dependent | rect. | 12 | 11 |
| 806 | 37.25 | radiation | 1.0 | 14400 | < th | dose independent | rect. | 21 | 9 |
| 819 | 37.26 | wind | 7.0 | 43200 | > th | dose independent | rect. | 20 | 17 |
| 858 | 37.28 | radiation | 1.0 | 14400 | > th | dose independent | rect. | 4 | 2 |
| 860 | 37.28 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 6 | 3 |
| 871 | 37.28 | wind | 7.0 | 43200 | < th | dose independent | rect. | 23 | 14 |
| 873 | 37.28 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 6 | 3 |
| 921 | 37.31 | wind | 7.0 | 43200 | < th | dose independent | rect. | 20 | 17 |
| 941 | 37.32 | radiation | 1.0 | 14400 | < th | dose independent | rect. | 4 | 2 |
| 948 | 37.32 | humidity | 80.0 | 43200 | > th | dose dependent | rect. | 11 | 2 |
| 967 | 37.34 | wind | 7.0 | 43200 | > th | dose independent | rect. | 23 | 14 |