Os07g0165500
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os07g0165500 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = humidity,
response mode = < th, dose dependency = dose independent, type of G = sin)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 135.02 | 0.546 | 3.08 | -0.515 | 0.299 | 1.41 | 0.171 | -5.35 | 0.287 | 10.9 | 67 | 11 | 3.88 | -- |
| 142.48 | 0.556 | 3.06 | -0.405 | 0.253 | 1.86 | -0.301 | -- | 0.308 | 10.3 | 66.14 | 34 | 3.38 | -- |
| 135.13 | 0.541 | 3.08 | -0.509 | 0.299 | 1.4 | -- | -5.2 | 0.287 | 10.8 | 67.12 | 11 | 3.88 | -- |
| 142.78 | 0.557 | 3.07 | -0.443 | 0.26 | 1.85 | -- | -- | 0.288 | 10.5 | 66.24 | 34 | 3.31 | -- |
| 139.53 | 0.55 | 3.07 | -0.445 | -- | 1.84 | -- | -4.44 | 0.306 | -- | 67 | 32 | 3.47 | -- |
| 158.57 | 0.59 | 3.08 | -0.446 | 0.419 | -- | -0.368 | -- | 0.255 | 11.2 | -- | -- | -- | -- |
| 159.12 | 0.591 | 3.08 | -0.46 | 0.421 | -- | -- | -- | 0.255 | 11.4 | -- | -- | -- | -- |
| 146.26 | 0.563 | 3.08 | -0.433 | -- | 2.06 | -- | -- | 0.29 | -- | 66.05 | 34 | 3.06 | -- |
| 147.91 | 0.566 | 3.06 | -- | 0.257 | 1.88 | -- | -- | 0.333 | 10.6 | 66 | 34 | 3.23 | -- |
| 170.2 | 0.61 | 3.09 | -0.471 | -- | -- | -- | -- | 0.25 | -- | -- | -- | -- | -- |
| 164.69 | 0.6 | 3.07 | -- | 0.425 | -- | -- | -- | 0.306 | 11.5 | -- | -- | -- | -- |
| 151.2 | 0.573 | 3.07 | -- | -- | 2.09 | -- | -- | 0.338 | -- | 66.62 | 34 | 2.93 | -- |
| 176.05 | 0.619 | 3.08 | -- | -- | -- | -- | -- | 0.303 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 133.37 | radiation | 30 | 10 | > th | dose dependent | rect. | 7 | 2 |
| 51 | 134.16 | humidity | 70 | 10 | < th | dose independent | rect. | 18 | 14 |
| 66 | 134.18 | humidity | 70 | 30 | < th | dose dependent | rect. | 18 | 14 |
| 71 | 134.32 | radiation | 30 | 10 | > th | dose independent | rect. | 7 | 2 |
| 108 | 134.78 | humidity | 80 | 30 | < th | dose dependent | rect. | 20 | 13 |
| 142 | 134.96 | humidity | 80 | 30 | < th | dose dependent | rect. | 5 | 4 |
| 249 | 135.49 | humidity | 80 | 90 | < th | dose independent | rect. | 5 | 2 |
| 304 | 135.81 | humidity | 70 | 10 | < th | dose independent | rect. | 7 | 1 |
| 588 | 137.42 | humidity | 70 | 10 | < th | dose independent | sin | 10 | NA |
| 744 | 139.98 | radiation | 20 | 30 | > th | dose independent | sin | 10 | NA |
| 754 | 140.41 | humidity | 70 | 10 | > th | dose independent | sin | 10 | NA |
| 757 | 140.62 | humidity | 80 | 720 | < th | dose independent | rect. | 1 | 7 |
| 777 | 140.87 | atmosphere | 1005 | 30 | > th | dose dependent | rect. | 7 | 1 |
| 784 | 141.19 | radiation | 30 | 30 | < th | dose independent | sin | 11 | NA |
| 807 | 141.57 | humidity | 80 | 720 | < th | dose dependent | rect. | 21 | 11 |
| 854 | 142.02 | humidity | 80 | 720 | > th | dose independent | rect. | 2 | 6 |
| 906 | 142.63 | humidity | 80 | 10 | < th | dose dependent | sin | 10 | NA |
| 940 | 142.77 | humidity | 80 | 1440 | > th | dose independent | rect. | 3 | 4 |