Os07g0165100
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : C2 domain containing protein.
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Os07g0165100 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : C2 domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = atmosphere,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 179.63 | 0.63 | 6.77 | -1.21 | 2.99 | -1.29 | -0.131 | -2.69 | -0.711 | 13.9 | 1015 | 5038 | -- | -- |
| 192.22 | 0.646 | 6.81 | -1.5 | 3.02 | -0.897 | -0.341 | -- | -0.759 | 13.9 | 1013 | 4864 | -- | -- |
| 179.7 | 0.624 | 6.77 | -1.21 | 2.99 | -1.28 | -- | -2.66 | -0.711 | 13.9 | 1015 | 5038 | -- | -- |
| 192.1 | 0.646 | 6.82 | -1.54 | 3 | -0.897 | -- | -- | -0.785 | 13.9 | 1013 | 4864 | -- | -- |
| 719.61 | 1.25 | 6.8 | -1.26 | -- | -1.08 | -- | -2.62 | -0.764 | -- | 1014 | 4982 | -- | -- |
| 212.02 | 0.683 | 6.79 | -1.38 | 2.99 | -- | -0.085 | -- | -0.652 | 13.9 | -- | -- | -- | -- |
| 212.05 | 0.682 | 6.79 | -1.38 | 2.99 | -- | -- | -- | -0.653 | 13.9 | -- | -- | -- | -- |
| 730.6 | 1.26 | 6.86 | -1.88 | -- | -0.799 | -- | -- | -0.895 | -- | 1014 | 7230 | -- | -- |
| 250.74 | 0.738 | 6.77 | -- | 3.03 | -0.763 | -- | -- | -0.581 | 14 | 1014 | 4335 | -- | -- |
| 751.12 | 1.28 | 6.82 | -1.5 | -- | -- | -- | -- | -0.722 | -- | -- | -- | -- | -- |
| 262.07 | 0.757 | 6.75 | -- | 3.01 | -- | -- | -- | -0.499 | 13.9 | -- | -- | -- | -- |
| 773.41 | 1.3 | 6.81 | -- | -- | 1.6 | -- | -- | -0.725 | -- | 1007 | 762 | -- | -- |
| 810.55 | 1.33 | 6.78 | -- | -- | -- | -- | -- | -0.555 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 175.17 | humidity | 60.0 | 4320 | < th | dose independent | rect. | 10 | 1 |
| 3 | 175.46 | humidity | 60.0 | 4320 | > th | dose independent | rect. | 9 | 2 |
| 4 | 176.55 | humidity | 60.0 | 4320 | > th | dose independent | rect. | 22 | 13 |
| 21 | 176.60 | humidity | 60.0 | 4320 | > th | dose independent | rect. | 24 | 11 |
| 26 | 176.66 | humidity | 60.0 | 4320 | > th | dose independent | rect. | 2 | 9 |
| 32 | 176.93 | temperature | 30.0 | 90 | < th | dose dependent | rect. | 1 | 9 |
| 34 | 177.38 | humidity | 50.0 | 4320 | > th | dose independent | rect. | 11 | 4 |
| 35 | 177.50 | radiation | 10.0 | 720 | < th | dose dependent | rect. | 10 | 20 |
| 36 | 177.55 | atmosphere | 995.0 | 43200 | < th | dose independent | rect. | 15 | 4 |
| 39 | 177.55 | radiation | 1.0 | 43200 | < th | dose dependent | rect. | 19 | 8 |
| 40 | 177.57 | atmosphere | 995.0 | 43200 | > th | dose independent | rect. | 15 | 5 |
| 53 | 177.98 | radiation | 1.0 | 43200 | < th | dose dependent | rect. | 19 | 6 |
| 54 | 178.03 | radiation | 1.0 | 43200 | < th | dose dependent | rect. | 21 | 6 |
| 57 | 178.11 | humidity | 50.0 | 4320 | > th | dose independent | rect. | 19 | 20 |
| 60 | 178.14 | humidity | 50.0 | 4320 | > th | dose independent | rect. | 22 | 17 |
| 66 | 178.22 | radiation | 1.0 | 43200 | < th | dose dependent | rect. | 21 | 4 |
| 68 | 178.28 | humidity | 50.0 | 4320 | > th | dose independent | rect. | 4 | 11 |
| 69 | 178.28 | humidity | 50.0 | 4320 | > th | dose independent | rect. | 2 | 13 |
| 74 | 178.37 | humidity | 50.0 | 4320 | > th | dose independent | rect. | 24 | 15 |
| 86 | 178.76 | radiation | 10.0 | 720 | < th | dose dependent | sin | 18 | NA |
| 89 | 178.79 | temperature | 30.0 | 90 | < th | dose dependent | rect. | 17 | 17 |
| 94 | 178.88 | temperature | 30.0 | 270 | < th | dose dependent | rect. | 15 | 17 |
| 98 | 179.06 | temperature | 30.0 | 270 | < th | dose dependent | rect. | 16 | 15 |
| 120 | 179.29 | atmosphere | 1015.0 | 4320 | < th | dose independent | rect. | 9 | 4 |
| 124 | 179.34 | atmosphere | 1015.0 | 4320 | < th | dose independent | rect. | 10 | 1 |
| 126 | 179.35 | atmosphere | 1015.0 | 4320 | > th | dose independent | rect. | 9 | 4 |
| 127 | 179.35 | atmosphere | 1015.0 | 4320 | > th | dose independent | rect. | 8 | 6 |
| 147 | 179.42 | atmosphere | 1015.0 | 4320 | > th | dose independent | rect. | 10 | 1 |
| 161 | 179.45 | atmosphere | 995.0 | 43200 | > th | dose independent | rect. | 18 | 2 |
| 169 | 179.46 | atmosphere | 1015.0 | 4320 | > th | dose dependent | rect. | 9 | 3 |
| 173 | 179.48 | atmosphere | 995.0 | 43200 | > th | dose independent | rect. | 16 | 1 |
| 178 | 179.48 | atmosphere | 1015.0 | 4320 | > th | dose dependent | rect. | 10 | 1 |
| 188 | 179.53 | atmosphere | 995.0 | 43200 | < th | dose independent | rect. | 16 | 1 |
| 192 | 179.53 | atmosphere | 995.0 | 43200 | < th | dose dependent | rect. | 16 | 1 |
| 277 | 179.76 | humidity | 60.0 | 4320 | < th | dose dependent | rect. | 10 | 2 |
| 346 | 180.01 | atmosphere | 1015.0 | 4320 | < th | dose independent | rect. | 14 | 1 |
| 375 | 180.10 | humidity | 50.0 | 4320 | > th | dose independent | sin | 5 | NA |
| 377 | 180.11 | atmosphere | 1010.0 | 4320 | > th | dose dependent | rect. | 14 | 1 |
| 403 | 180.22 | atmosphere | 1015.0 | 4320 | < th | dose independent | rect. | 19 | 1 |
| 420 | 180.30 | humidity | 50.0 | 4320 | < th | dose independent | rect. | 11 | 3 |
| 423 | 180.31 | humidity | 60.0 | 4320 | < th | dose dependent | rect. | 9 | 4 |
| 492 | 180.59 | atmosphere | 995.0 | 43200 | < th | dose dependent | rect. | 15 | 7 |
| 508 | 180.76 | atmosphere | 995.0 | 43200 | > th | dose independent | rect. | 14 | 8 |
| 580 | 181.04 | wind | 1.0 | 14400 | < th | dose dependent | rect. | 8 | 3 |
| 612 | 181.21 | atmosphere | 1015.0 | 4320 | < th | dose independent | sin | 23 | NA |
| 621 | 181.29 | atmosphere | 1015.0 | 4320 | > th | dose independent | sin | 23 | NA |
| 627 | 181.31 | humidity | 60.0 | 4320 | < th | dose dependent | sin | 8 | NA |
| 631 | 181.33 | humidity | 90.0 | 720 | < th | dose independent | rect. | 13 | 5 |
| 633 | 181.34 | temperature | 25.0 | 30 | < th | dose dependent | rect. | 1 | 22 |
| 640 | 181.37 | humidity | 50.0 | 4320 | > th | dose independent | rect. | 11 | 19 |
| 659 | 181.39 | humidity | 50.0 | 4320 | > th | dose independent | rect. | 11 | 14 |
| 665 | 181.41 | humidity | 50.0 | 4320 | > th | dose independent | rect. | 11 | 12 |
| 666 | 181.41 | humidity | 50.0 | 4320 | > th | dose independent | rect. | 11 | 16 |
| 674 | 181.44 | atmosphere | 1015.0 | 4320 | > th | dose dependent | sin | 23 | NA |
| 678 | 181.45 | radiation | 1.0 | 270 | < th | dose independent | rect. | 21 | 23 |
| 685 | 181.51 | humidity | 50.0 | 4320 | > th | dose independent | rect. | 11 | 9 |
| 690 | 181.53 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 21 | 1 |
| 723 | 181.69 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 20 | 2 |
| 724 | 181.70 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 20 | 2 |
| 728 | 181.70 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 20 | 2 |
| 786 | 181.82 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 20 | 3 |
| 838 | 181.90 | humidity | 50.0 | 4320 | > th | dose independent | rect. | 4 | 21 |
| 839 | 181.90 | humidity | 50.0 | 4320 | > th | dose independent | rect. | 2 | 23 |
| 848 | 181.92 | humidity | 50.0 | 4320 | > th | dose independent | rect. | 24 | 23 |
| 849 | 181.93 | humidity | 50.0 | 4320 | > th | dose independent | no | NA | NA |
| 853 | 181.93 | humidity | 50.0 | 4320 | > th | dose independent | rect. | 4 | 19 |
| 860 | 181.93 | humidity | 50.0 | 4320 | > th | dose independent | rect. | 22 | 22 |
| 906 | 181.99 | temperature | 20.0 | 4320 | < th | dose independent | rect. | 5 | 2 |
| 930 | 182.01 | humidity | 50.0 | 4320 | > th | dose independent | rect. | 2 | 18 |
| 934 | 182.01 | humidity | 50.0 | 4320 | > th | dose independent | rect. | 24 | 20 |
| 942 | 182.02 | humidity | 50.0 | 4320 | > th | dose independent | rect. | 4 | 16 |
| 997 | 182.10 | temperature | 20.0 | 4320 | > th | dose independent | rect. | 5 | 2 |