Os07g0164900
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to Aldehyde oxidase-2.
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Os07g0164900 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to Aldehyde oxidase-2.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = humidity,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 97.33 | 0.464 | 11.4 | 1.46 | 1.2 | -1.23 | -1.51 | -0.413 | 0.532 | 15.4 | 79.76 | 79 | -- | -- |
| 97.31 | 0.459 | 11.4 | 1.42 | 1.17 | -1.25 | -1.21 | -- | 0.541 | 15.5 | 77.72 | 63 | -- | -- |
| 100.77 | 0.468 | 11.4 | 1.4 | 1.18 | -1.2 | -- | 0.435 | 0.546 | 15.3 | 77.3 | 66 | -- | -- |
| 101.53 | 0.469 | 11.4 | 1.38 | 1.17 | -1.21 | -- | -- | 0.554 | 15.4 | 76.11 | 56 | -- | -- |
| 129.99 | 0.531 | 11.4 | 1.31 | -- | -2.07 | -- | 0.698 | 0.481 | -- | 71.63 | 56 | -- | -- |
| 138.56 | 0.552 | 11.4 | 1.34 | 2.1 | -- | -0.695 | -- | 0.702 | 15.2 | -- | -- | -- | -- |
| 140.09 | 0.554 | 11.4 | 1.32 | 2.1 | -- | -- | -- | 0.697 | 15.2 | -- | -- | -- | -- |
| 131.74 | 0.535 | 11.4 | 1.35 | -- | -2.06 | -- | -- | 0.487 | -- | 71.71 | 66 | -- | -- |
| 150.49 | 0.574 | 11.4 | -- | 1.13 | -1.2 | -- | -- | 0.412 | 15.8 | 72.12 | 52 | -- | -- |
| 389.51 | 0.922 | 11.4 | 1.23 | -- | -- | -- | -- | 0.642 | -- | -- | -- | -- | -- |
| 186.29 | 0.638 | 11.4 | -- | 2.07 | -- | -- | -- | 0.55 | 15.2 | -- | -- | -- | -- |
| 178.97 | 0.623 | 11.4 | -- | -- | -2.03 | -- | -- | 0.35 | -- | 70.31 | 56 | -- | -- |
| 429.73 | 0.968 | 11.4 | -- | -- | -- | -- | -- | 0.505 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 87.04 | humidity | 70.0 | 10 | > th | dose dependent | rect. | 1 | 18 |
| 3 | 87.98 | humidity | 70.0 | 10 | > th | dose dependent | sin | 4 | NA |
| 14 | 89.45 | humidity | 80.0 | 30 | > th | dose independent | rect. | 1 | 17 |
| 16 | 89.51 | radiation | 1.0 | 270 | < th | dose dependent | sin | 5 | NA |
| 18 | 89.59 | radiation | 1.0 | 270 | < th | dose independent | rect. | 22 | 21 |
| 20 | 89.84 | humidity | 70.0 | 10 | > th | dose dependent | rect. | 1 | 15 |
| 21 | 89.90 | radiation | 1.0 | 270 | < th | dose dependent | rect. | 22 | 22 |
| 28 | 90.22 | temperature | 30.0 | 90 | < th | dose dependent | rect. | 1 | 18 |
| 37 | 90.74 | radiation | 1.0 | 270 | < th | dose independent | sin | 5 | NA |
| 45 | 91.01 | radiation | 1.0 | 270 | < th | dose independent | rect. | 24 | 16 |
| 49 | 91.14 | radiation | 1.0 | 270 | < th | dose dependent | rect. | 24 | 16 |
| 53 | 91.24 | humidity | 90.0 | 270 | < th | dose independent | rect. | 6 | 18 |
| 59 | 91.41 | humidity | 80.0 | 30 | > th | dose independent | rect. | 1 | 15 |
| 70 | 91.66 | radiation | 1.0 | 270 | > th | dose independent | sin | 5 | NA |
| 78 | 91.91 | humidity | 80.0 | 90 | > th | dose dependent | rect. | 24 | 23 |
| 79 | 91.92 | humidity | 80.0 | 30 | > th | dose independent | rect. | 3 | 15 |
| 86 | 92.03 | temperature | 10.0 | 90 | > th | dose dependent | rect. | 7 | 18 |
| 89 | 92.12 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 5 | 19 |
| 160 | 93.33 | temperature | 10.0 | 10 | > th | dose dependent | rect. | 7 | 18 |
| 190 | 93.92 | radiation | 1.0 | 270 | > th | dose independent | rect. | 17 | 22 |
| 208 | 94.20 | humidity | 70.0 | 10 | > th | dose dependent | rect. | 24 | 23 |
| 209 | 94.22 | humidity | 80.0 | 30 | > th | dose independent | rect. | 3 | 13 |
| 244 | 94.67 | humidity | 90.0 | 90 | < th | dose independent | sin | 4 | NA |
| 341 | 95.74 | humidity | 80.0 | 30 | > th | dose independent | sin | 4 | NA |
| 375 | 96.16 | humidity | 70.0 | 10 | > th | dose dependent | rect. | 1 | 11 |
| 407 | 96.47 | humidity | 70.0 | 30 | > th | dose dependent | rect. | 9 | 23 |
| 450 | 96.95 | temperature | 25.0 | 90 | < th | dose independent | rect. | 1 | 18 |
| 468 | 97.18 | humidity | 90.0 | 90 | < th | dose independent | rect. | 21 | 14 |
| 478 | 97.31 | humidity | 80.0 | 90 | > th | dose dependent | rect. | 19 | 23 |
| 515 | 97.60 | humidity | 80.0 | 90 | > th | dose dependent | no | NA | NA |
| 530 | 97.75 | radiation | 20.0 | 30 | < th | dose dependent | rect. | 13 | 19 |
| 531 | 97.75 | humidity | 80.0 | 90 | > th | dose dependent | rect. | 13 | 23 |
| 540 | 97.84 | humidity | 80.0 | 30 | > th | dose independent | rect. | 1 | 22 |
| 571 | 98.00 | humidity | 70.0 | 10 | > th | dose dependent | rect. | 11 | 23 |
| 573 | 98.02 | humidity | 80.0 | 90 | > th | dose dependent | rect. | 21 | 23 |
| 578 | 98.05 | humidity | 70.0 | 10 | > th | dose dependent | rect. | 13 | 23 |
| 592 | 98.12 | humidity | 70.0 | 10 | > th | dose dependent | rect. | 15 | 23 |
| 598 | 98.17 | humidity | 80.0 | 90 | > th | dose dependent | rect. | 15 | 23 |
| 602 | 98.20 | humidity | 70.0 | 10 | > th | dose dependent | no | NA | NA |
| 605 | 98.21 | humidity | 90.0 | 90 | < th | dose independent | rect. | 19 | 23 |
| 608 | 98.23 | humidity | 80.0 | 90 | > th | dose dependent | rect. | 17 | 23 |
| 647 | 98.49 | humidity | 70.0 | 10 | > th | dose dependent | rect. | 17 | 23 |
| 819 | 99.82 | humidity | 80.0 | 90 | > th | dose dependent | rect. | 7 | 23 |
| 826 | 99.86 | radiation | 20.0 | 30 | < th | dose dependent | rect. | 10 | 22 |
| 910 | 100.35 | humidity | 90.0 | 90 | < th | dose independent | no | NA | NA |
| 938 | 100.50 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 5 | 19 |
| 940 | 100.50 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 5 | 19 |
| 948 | 100.55 | humidity | 90.0 | 30 | < th | dose dependent | sin | 7 | NA |
| 978 | 100.72 | humidity | 50.0 | 90 | > th | dose dependent | rect. | 13 | 18 |
| 999 | 100.86 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 5 | 6 |