Os07g0164800
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os07g0164800 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = humidity,
response mode = < th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 110.57 | 0.494 | 7.93 | -0.68 | 0.685 | 0.967 | 0.434 | 0.421 | -0.356 | 7.41 | 68.29 | 1276 | -- | -- |
| 110.92 | 0.491 | 7.94 | -0.731 | 0.683 | 0.993 | 0.426 | -- | -0.368 | 7.38 | 68.27 | 1278 | -- | -- |
| 111.07 | 0.491 | 7.93 | -0.673 | 0.684 | 0.97 | -- | 0.398 | -0.357 | 7.48 | 68.45 | 1278 | -- | -- |
| 111.39 | 0.492 | 7.94 | -0.721 | 0.683 | 0.995 | -- | -- | -0.369 | 7.49 | 68.21 | 1276 | -- | -- |
| 134.7 | 0.541 | 7.95 | -0.67 | -- | 0.971 | -- | 0.381 | -0.343 | -- | 68.41 | 1346 | -- | -- |
| 147.74 | 0.57 | 7.94 | -0.518 | 0.705 | -- | 0.631 | -- | -0.361 | 6.26 | -- | -- | -- | -- |
| 148.68 | 0.571 | 7.94 | -0.51 | 0.708 | -- | -- | -- | -0.362 | 6.41 | -- | -- | -- | -- |
| 135.01 | 0.541 | 7.96 | -0.715 | -- | 0.994 | -- | -- | -0.353 | -- | 68.69 | 1346 | -- | -- |
| 124.7 | 0.52 | 7.93 | -- | 0.675 | 0.882 | -- | -- | -0.301 | 7.42 | 68 | 1276 | -- | -- |
| 174.72 | 0.618 | 7.95 | -0.491 | -- | -- | -- | -- | -0.347 | -- | -- | -- | -- | -- |
| 155.52 | 0.583 | 7.93 | -- | 0.701 | -- | -- | -- | -0.306 | 6.45 | -- | -- | -- | -- |
| 148.06 | 0.567 | 7.94 | -- | -- | 0.89 | -- | -- | -0.276 | -- | 68.07 | 1364 | -- | -- |
| 181.09 | 0.628 | 7.94 | -- | -- | -- | -- | -- | -0.293 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 110.72 | humidity | 70 | 1440 | < th | dose independent | rect. | 18 | 19 |
| 2 | 110.78 | humidity | 90 | 1440 | < th | dose dependent | sin | 7 | NA |
| 3 | 110.81 | humidity | 70 | 1440 | < th | dose independent | rect. | 11 | 1 |
| 5 | 110.87 | wind | 1 | 43200 | > th | dose dependent | rect. | 1 | 2 |
| 7 | 111.14 | humidity | 70 | 1440 | > th | dose independent | rect. | 18 | 19 |
| 9 | 111.20 | humidity | 80 | 1440 | < th | dose dependent | sin | 9 | NA |
| 13 | 111.70 | humidity | 90 | 1440 | < th | dose dependent | rect. | 20 | 18 |
| 19 | 111.75 | wind | 9 | 43200 | < th | dose dependent | rect. | 1 | 2 |
| 31 | 112.19 | humidity | 70 | 1440 | < th | dose independent | rect. | 15 | 22 |
| 39 | 112.56 | humidity | 70 | 1440 | > th | dose independent | rect. | 11 | 1 |
| 44 | 112.70 | humidity | 90 | 1440 | < th | dose dependent | rect. | 5 | 3 |
| 60 | 113.08 | humidity | 50 | 1440 | > th | dose dependent | sin | 5 | NA |
| 67 | 113.15 | wind | 1 | 43200 | > th | dose dependent | rect. | 23 | 7 |
| 73 | 113.25 | humidity | 70 | 1440 | > th | dose independent | rect. | 10 | 3 |
| 80 | 113.31 | humidity | 70 | 1440 | < th | dose independent | rect. | 6 | 7 |
| 92 | 113.34 | humidity | 50 | 1440 | > th | dose dependent | rect. | 22 | 17 |
| 107 | 113.50 | wind | 9 | 43200 | < th | dose dependent | rect. | 23 | 7 |
| 110 | 113.51 | humidity | 70 | 1440 | > th | dose independent | rect. | 15 | 22 |
| 113 | 113.54 | humidity | 60 | 1440 | > th | dose dependent | rect. | 2 | 12 |
| 139 | 113.82 | humidity | 70 | 1440 | > th | dose independent | rect. | 24 | 13 |
| 142 | 113.83 | humidity | 70 | 1440 | > th | dose independent | rect. | 2 | 11 |
| 147 | 113.84 | humidity | 70 | 1440 | > th | dose independent | rect. | 6 | 7 |
| 150 | 113.85 | humidity | 70 | 1440 | < th | dose independent | sin | 2 | NA |
| 158 | 113.87 | humidity | 70 | 1440 | < th | dose independent | no | NA | NA |
| 160 | 113.87 | humidity | 70 | 1440 | < th | dose independent | rect. | 6 | 14 |
| 289 | 114.09 | wind | 1 | 43200 | > th | dose dependent | rect. | 1 | 5 |
| 340 | 114.38 | wind | 9 | 43200 | < th | dose dependent | rect. | 1 | 5 |
| 351 | 114.46 | humidity | 70 | 1440 | < th | dose independent | rect. | 11 | 23 |
| 353 | 114.47 | wind | 9 | 43200 | < th | dose dependent | rect. | 4 | 2 |
| 424 | 114.83 | humidity | 70 | 1440 | > th | dose independent | sin | 9 | NA |
| 433 | 114.87 | humidity | 70 | 1440 | > th | dose independent | sin | 3 | NA |
| 442 | 114.92 | humidity | 90 | 1440 | < th | dose dependent | rect. | 3 | 6 |
| 456 | 114.98 | wind | 1 | 43200 | > th | dose dependent | rect. | 4 | 2 |
| 460 | 115.03 | humidity | 70 | 1440 | < th | dose independent | sin | 9 | NA |
| 535 | 115.23 | humidity | 70 | 1440 | > th | dose independent | rect. | 24 | 20 |
| 538 | 115.24 | humidity | 70 | 1440 | > th | dose independent | rect. | 6 | 14 |
| 539 | 115.24 | humidity | 70 | 1440 | > th | dose independent | rect. | 2 | 18 |
| 541 | 115.24 | humidity | 70 | 1440 | > th | dose independent | rect. | 6 | 21 |
| 545 | 115.25 | humidity | 70 | 1440 | > th | dose independent | no | NA | NA |
| 557 | 115.25 | humidity | 70 | 1440 | > th | dose independent | rect. | 2 | 23 |
| 685 | 115.54 | wind | 1 | 43200 | > th | dose independent | rect. | 5 | 1 |
| 757 | 116.00 | radiation | 10 | 4320 | < th | dose dependent | rect. | 7 | 1 |
| 770 | 116.07 | humidity | 70 | 1440 | > th | dose independent | rect. | 11 | 23 |
| 795 | 116.14 | humidity | 90 | 1440 | < th | dose dependent | no | NA | NA |
| 829 | 116.24 | humidity | 90 | 1440 | < th | dose dependent | rect. | 2 | 23 |
| 851 | 116.33 | humidity | 90 | 1440 | < th | dose dependent | rect. | 5 | 23 |
| 920 | 116.50 | humidity | 50 | 1440 | > th | dose dependent | rect. | 13 | 23 |
| 945 | 116.54 | radiation | 10 | 1440 | < th | dose independent | rect. | 15 | 19 |
| 951 | 116.55 | wind | 1 | 43200 | > th | dose independent | rect. | 3 | 4 |
| 962 | 116.58 | humidity | 90 | 1440 | < th | dose dependent | rect. | 11 | 23 |
| 983 | 116.66 | humidity | 50 | 1440 | > th | dose dependent | no | NA | NA |