Os07g0163000
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : FAD linked oxidase, C-terminal domain containing protein.
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Os07g0163000 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : FAD linked oxidase, C-terminal domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 64.91 | 0.379 | 10 | -1.29 | 0.581 | 1.54 | -0.344 | -0.968 | -0.704 | 17.1 | 24.7 | 27 | -- | -- |
| 64.88 | 0.375 | 10 | -1.21 | 0.604 | 1.44 | -0.454 | -- | -0.741 | 17.1 | 23.26 | 22 | -- | -- |
| 65.16 | 0.376 | 10 | -1.29 | 0.587 | 1.53 | -- | -1.13 | -0.703 | 16.9 | 24.76 | 26 | -- | -- |
| 65.34 | 0.376 | 10 | -1.21 | 0.613 | 1.4 | -- | -- | -0.736 | 17 | 23.21 | 23 | -- | -- |
| 75.47 | 0.405 | 10 | -1.56 | -- | 1.94 | -- | -1.72 | -0.823 | -- | 24.05 | 118 | -- | -- |
| 95.83 | 0.459 | 9.96 | -0.947 | 1.13 | -- | 0.245 | -- | -0.535 | 16 | -- | -- | -- | -- |
| 96 | 0.459 | 9.96 | -0.944 | 1.13 | -- | -- | -- | -0.533 | 16 | -- | -- | -- | -- |
| 77.19 | 0.409 | 10 | -1.29 | -- | 1.83 | -- | -- | -0.771 | -- | 23.83 | 114 | -- | -- |
| 100.1 | 0.466 | 9.95 | -- | 0.742 | 1.12 | -- | -- | -0.499 | 16.5 | 25.05 | 24 | -- | -- |
| 165.71 | 0.602 | 9.95 | -0.99 | -- | -- | -- | -- | -0.563 | -- | -- | -- | -- | -- |
| 119.48 | 0.511 | 9.93 | -- | 1.15 | -- | -- | -- | -0.428 | 16 | -- | -- | -- | -- |
| 118.77 | 0.508 | 9.95 | -- | -- | 1.66 | -- | -- | -0.563 | -- | 24.73 | 111 | -- | -- |
| 191.57 | 0.646 | 9.93 | -- | -- | -- | -- | -- | -0.454 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 57.95 | temperature | 15 | 720 | > th | dose dependent | rect. | 4 | 7 |
| 2 | 58.03 | temperature | 15 | 270 | > th | dose dependent | rect. | 4 | 13 |
| 7 | 58.31 | temperature | 30 | 720 | < th | dose dependent | rect. | 2 | 10 |
| 13 | 58.59 | temperature | 15 | 270 | > th | dose dependent | sin | 2 | NA |
| 15 | 58.64 | temperature | 20 | 720 | > th | dose dependent | rect. | 5 | 4 |
| 18 | 58.71 | temperature | 30 | 720 | < th | dose dependent | rect. | 1 | 12 |
| 27 | 58.91 | temperature | 10 | 720 | > th | dose dependent | sin | 5 | NA |
| 28 | 58.91 | temperature | 30 | 270 | < th | dose dependent | sin | 1 | NA |
| 59 | 59.71 | temperature | 10 | 720 | > th | dose dependent | rect. | 23 | 16 |
| 64 | 59.81 | temperature | 30 | 720 | < th | dose dependent | sin | 5 | NA |
| 78 | 60.05 | temperature | 15 | 720 | > th | dose dependent | rect. | 1 | 14 |
| 99 | 60.55 | temperature | 30 | 270 | < th | dose dependent | rect. | 7 | 9 |
| 179 | 61.72 | temperature | 30 | 720 | < th | dose dependent | rect. | 7 | 5 |
| 207 | 61.98 | temperature | 20 | 10 | > th | dose dependent | rect. | 5 | 15 |
| 342 | 63.10 | temperature | 30 | 720 | < th | dose dependent | rect. | 9 | 2 |
| 409 | 63.64 | temperature | 25 | 30 | > th | dose dependent | rect. | 7 | 17 |
| 420 | 63.75 | temperature | 25 | 30 | > th | dose dependent | rect. | 7 | 23 |
| 443 | 63.86 | temperature | 25 | 30 | > th | dose dependent | rect. | 7 | 21 |
| 456 | 63.99 | temperature | 25 | 30 | > th | dose dependent | rect. | 7 | 19 |
| 493 | 64.21 | temperature | 25 | 30 | > th | dose dependent | rect. | 21 | 23 |
| 545 | 64.53 | temperature | 25 | 30 | > th | dose dependent | rect. | 1 | 23 |
| 610 | 64.89 | temperature | 25 | 30 | > th | dose dependent | rect. | 1 | 19 |
| 614 | 64.91 | temperature | 25 | 30 | > th | dose dependent | rect. | 23 | 21 |
| 624 | 64.94 | temperature | 25 | 30 | > th | dose dependent | rect. | 23 | 23 |
| 645 | 65.03 | temperature | 25 | 30 | > th | dose dependent | rect. | 5 | 23 |
| 650 | 65.05 | temperature | 25 | 30 | > th | dose dependent | no | NA | NA |
| 811 | 65.50 | temperature | 25 | 270 | > th | dose independent | rect. | 6 | 12 |
| 927 | 65.83 | temperature | 25 | 270 | < th | dose independent | rect. | 7 | 9 |