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Os07g0162500

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Esterase/lipase/thioesterase domain containing protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 13.3 (0.0206) R2 : 0.689
β1 : -- (--) R2dD : -- R2D : --
β2 : 1.69 (0.0532) R2dC : 0.69 R2C : 0.686
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : -0.081 (0.0433) R2dN8 : 0.00308 R2N8 : -0.000907
σ : 0.388
deviance : 68.89
__
_____
C
peak time of C : 4.54
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = radiation, response mode = < th, dose dependency = dose dependent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
49.94 0.332 13.4 -0.678 1.92 -0.355 -2.37 5.22 -0.218 4.7 0.0198 777 -- --
60.37 0.362 13.3 -0.434 1.82 -0.342 0.762 -- -0.125 4.76 1.053 2364 -- --
54.44 0.344 13.4 -0.605 1.86 -0.561 -- 4.96 -0.169 4.94 0.0003787 935 -- --
59.46 0.359 13.4 -0.496 1.8 -0.948 -- -- -0.216 5.17 0.6693 1297 -- --
84 0.427 13.3 -0.276 -- 1.8 -- 3.43 0.0346 -- 5.288e-05 641 -- --
63.48 0.374 13.3 -0.376 1.7 -- 0.792 -- -0.119 4.62 -- -- -- --
65.05 0.378 13.3 -0.382 1.7 -- -- -- -0.124 4.53 -- -- -- --
73.86 0.4 13.3 -0.348 -- 1.78 -- -- -0.0209 -- 7.107 566 -- --
66.07 0.379 13.3 -- 1.67 -0.528 -- -- -0.12 4.9 1.52 1342 -- --
218.98 0.691 13.3 -0.316 -- -- -- -- -0.0788 -- -- -- -- --
68.89 0.388 13.3 -- 1.69 -- -- -- -0.081 4.54 -- -- -- --
76.66 0.408 13.3 -- -- 1.73 -- -- 0.0104 -- 5.585 565 -- --
221.61 0.695 13.3 -- -- -- -- -- -0.0438 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 46.87 humidity 90.0 270 < th dose independent rect. 16 8
3 47.71 humidity 90.0 720 < th dose independent rect. 17 6
23 48.84 humidity 90.0 720 < th dose independent rect. 9 15
44 49.64 precipitation 0.1 720 < th dose independent rect. 15 15
45 49.64 precipitation 0.1 720 < th dose dependent rect. 15 15
51 49.77 humidity 90.0 720 > th dose dependent rect. 20 1
56 49.87 humidity 90.0 720 > th dose dependent rect. 19 4
59 49.91 precipitation 0.1 720 < th dose independent rect. 15 23
60 49.91 precipitation 0.1 720 < th dose dependent rect. 15 23
63 49.93 temperature 25.0 720 < th dose independent rect. 18 21
68 49.96 humidity 90.0 270 < th dose independent rect. 16 15
80 50.11 humidity 90.0 720 < th dose independent sin 18 NA
90 50.17 precipitation 0.1 720 < th dose independent sin 12 NA
91 50.17 precipitation 0.1 720 < th dose dependent sin 12 NA
95 50.23 precipitation 0.1 720 < th dose independent rect. 13 16
96 50.23 precipitation 0.1 720 < th dose dependent rect. 13 16
99 50.27 humidity 80.0 720 < th dose independent rect. 11 9
119 50.38 precipitation 0.1 720 < th dose independent rect. 8 15
120 50.38 precipitation 0.1 720 < th dose dependent rect. 8 15
124 50.41 precipitation 0.1 720 < th dose independent sin 23 NA
125 50.41 precipitation 0.1 720 < th dose dependent sin 23 NA
128 50.42 humidity 90.0 720 > th dose dependent rect. 9 15
136 50.51 precipitation 0.1 720 < th dose independent rect. 11 9
138 50.51 precipitation 0.1 720 < th dose dependent rect. 11 9
147 50.54 precipitation 0.1 720 < th dose independent rect. 17 18
149 50.54 precipitation 0.1 720 < th dose dependent rect. 17 18
167 50.68 precipitation 0.1 720 < th dose independent rect. 11 17
169 50.68 precipitation 0.1 720 < th dose dependent rect. 11 17
170 50.69 precipitation 0.1 720 < th dose independent sin 15 NA
173 50.69 precipitation 0.1 720 < th dose dependent sin 15 NA
209 50.82 humidity 90.0 270 < th dose independent sin 15 NA
227 50.89 precipitation 0.1 720 < th dose independent rect. 18 9
229 50.89 precipitation 0.1 720 < th dose dependent rect. 18 9
257 51.11 radiation 30.0 270 < th dose independent sin 16 NA
281 51.21 precipitation 0.1 270 < th dose independent sin 2 NA
283 51.21 precipitation 0.1 720 < th dose independent rect. 8 21
284 51.21 precipitation 0.1 270 < th dose dependent sin 2 NA
285 51.21 precipitation 0.1 720 < th dose dependent rect. 8 21
299 51.27 radiation 1.0 720 > th dose independent rect. 8 11
311 51.29 temperature 10.0 270 > th dose dependent rect. 15 18
328 51.33 humidity 50.0 720 > th dose dependent rect. 17 15
344 51.35 humidity 90.0 720 > th dose independent rect. 17 7
363 51.41 precipitation 0.1 720 < th dose independent rect. 6 23
364 51.41 precipitation 0.1 720 < th dose dependent rect. 6 23
392 51.48 wind 7.0 270 < th dose independent rect. 12 14
400 51.50 radiation 1.0 720 > th dose independent sin 18 NA
411 51.51 precipitation 0.1 270 < th dose independent sin 8 NA
414 51.51 precipitation 0.1 270 < th dose dependent sin 8 NA
416 51.52 radiation 20.0 270 < th dose independent rect. 14 9
434 51.55 temperature 15.0 10 > th dose dependent rect. 17 8
445 51.58 precipitation 0.1 270 < th dose independent rect. 2 10
449 51.58 precipitation 0.1 270 < th dose dependent rect. 2 10
465 51.62 radiation 1.0 720 < th dose dependent rect. 20 22
471 51.63 temperature 15.0 90 > th dose dependent rect. 15 10
489 51.66 temperature 15.0 90 > th dose dependent rect. 15 12
501 51.69 radiation 1.0 720 > th dose independent rect. 15 4
522 51.72 temperature 10.0 10 > th dose dependent rect. 14 14
525 51.73 precipitation 0.1 720 < th dose independent rect. 23 15
531 51.73 radiation 40.0 270 < th dose dependent sin 18 NA
532 51.73 precipitation 0.1 720 < th dose dependent rect. 23 15
552 51.77 temperature 25.0 720 < th dose independent sin 4 NA
556 51.77 temperature 30.0 30 < th dose independent rect. 17 8
561 51.78 wind 1.0 30 > th dose independent rect. 17 8
566 51.79 radiation 1.0 720 > th dose independent rect. 15 15
567 51.79 humidity 90.0 720 < th dose dependent rect. 17 5
579 51.81 humidity 90.0 720 > th dose independent rect. 20 1
600 51.84 precipitation 0.1 720 < th dose independent rect. 8 23
603 51.84 precipitation 0.1 720 < th dose dependent rect. 8 23
621 51.87 humidity 70.0 720 > th dose dependent rect. 14 18
623 51.88 precipitation 0.1 720 < th dose independent rect. 15 7
627 51.88 precipitation 0.1 720 < th dose dependent rect. 15 7
629 51.88 radiation 1.0 720 < th dose dependent rect. 14 17
677 51.99 humidity 90.0 720 > th dose independent rect. 10 14
678 51.99 temperature 25.0 720 < th dose independent rect. 24 23
693 52.02 precipitation 0.1 720 < th dose independent rect. 23 22
696 52.02 precipitation 0.1 720 < th dose dependent rect. 23 22
700 52.03 radiation 1.0 720 < th dose dependent rect. 3 14
714 52.05 temperature 15.0 270 > th dose dependent rect. 13 11
722 52.07 wind 9.0 270 < th dose independent rect. 23 17
723 52.07 humidity 50.0 720 > th dose dependent sin 11 NA
731 52.09 temperature 25.0 720 < th dose independent no NA NA
766 52.12 humidity 60.0 30 > th dose independent rect. 17 8
773 52.13 precipitation 0.1 720 < th dose independent rect. 13 7
782 52.13 precipitation 0.1 720 < th dose dependent rect. 13 7
823 52.16 radiation 1.0 720 < th dose dependent sin 13 NA
834 52.18 temperature 30.0 720 < th dose dependent rect. 20 19
841 52.19 humidity 70.0 720 > th dose dependent rect. 11 21
842 52.19 radiation 1.0 720 < th dose dependent rect. 18 23
845 52.20 radiation 40.0 270 < th dose dependent rect. 14 9
846 52.21 humidity 80.0 1440 > th dose independent rect. 11 1
857 52.22 humidity 90.0 720 > th dose independent rect. 13 11
867 52.23 temperature 15.0 10 > th dose dependent rect. 17 10
878 52.24 radiation 1.0 720 < th dose independent rect. 21 21
879 52.24 humidity 90.0 720 > th dose dependent sin 19 NA
881 52.24 radiation 20.0 90 < th dose dependent rect. 16 9
909 52.27 temperature 25.0 720 < th dose independent rect. 11 23
920 52.27 temperature 10.0 720 > th dose dependent rect. 6 20
924 52.28 humidity 80.0 1440 < th dose independent rect. 11 1
941 52.30 wind 7.0 720 < th dose independent rect. 5 10
945 52.31 temperature 15.0 30 > th dose independent rect. 17 8
953 52.32 temperature 15.0 10 > th dose dependent sin 15 NA
954 52.32 temperature 10.0 10 > th dose dependent sin 17 NA
989 52.35 temperature 30.0 720 < th dose dependent rect. 18 15