Os07g0162400
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Esterase/lipase/thioesterase domain containing protein.
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Os07g0162400 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Esterase/lipase/thioesterase domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = rect.)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 93.91 | 0.455 | 11.2 | 0.364 | 0.165 | 2.06 | 0.217 | -4.52 | 0.549 | 10.2 | 30.07 | 4320 | 7.97 | 0.963 |
| 93.95 | 0.451 | 11.2 | 0.556 | 0.162 | 1.58 | 0.216 | -- | 0.541 | 10.5 | 30.14 | 4561 | 7.9 | 1.03 |
| 94.1 | 0.452 | 11.2 | 0.382 | 0.164 | 2.05 | -- | -4.38 | 0.548 | 10.1 | 30.08 | 4292 | 7.97 | 0.94 |
| 94.1 | 0.452 | 11.2 | 0.551 | 0.163 | 1.59 | -- | -- | 0.547 | 10.1 | 30.11 | 4531 | 7.88 | 1.01 |
| 95.7 | 0.456 | 11.2 | 0.456 | -- | 1.88 | -- | -2.69 | 0.547 | -- | 30.15 | 4677 | 7.96 | 0.867 |
| 125.12 | 0.524 | 11.2 | 0.628 | 0.162 | -- | 0.213 | -- | 0.479 | 10.1 | -- | -- | -- | -- |
| 125.29 | 0.524 | 11.2 | 0.636 | 0.162 | -- | -- | -- | 0.48 | 9.93 | -- | -- | -- | -- |
| 95.69 | 0.456 | 11.2 | 0.551 | -- | 1.59 | -- | -- | 0.545 | -- | 30.15 | 4751 | 7.91 | 0.956 |
| 101.8 | 0.47 | 11.2 | -- | 0.163 | 1.65 | -- | -- | 0.504 | 9.89 | 29.97 | 4297 | 7.85 | 1.07 |
| 126.86 | 0.526 | 11.2 | 0.634 | -- | -- | -- | -- | 0.48 | -- | -- | -- | -- | -- |
| 135.95 | 0.545 | 11.2 | -- | 0.16 | -- | -- | -- | 0.409 | 9.64 | -- | -- | -- | -- |
| 103.42 | 0.474 | 11.2 | -- | -- | 1.65 | -- | -- | 0.5 | -- | 29.99 | 4122 | 7.83 | 1.07 |
| 137.47 | 0.547 | 11.2 | -- | -- | -- | -- | -- | 0.409 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 94.14 | temperature | 30 | 4320 | > th | dose dependent | rect. | 8 | 1 |
| 15 | 95.53 | temperature | 30 | 4320 | > th | dose independent | rect. | 8 | 1 |
| 43 | 95.62 | wind | 1 | 4320 | < th | dose dependent | rect. | 6 | 1 |
| 44 | 97.50 | temperature | 30 | 4320 | < th | dose independent | rect. | 8 | 1 |
| 45 | 97.82 | temperature | 30 | 4320 | < th | dose independent | rect. | 19 | 14 |
| 48 | 98.07 | temperature | 30 | 4320 | < th | dose independent | rect. | 22 | 11 |
| 49 | 98.14 | temperature | 30 | 4320 | < th | dose independent | rect. | 24 | 9 |
| 51 | 98.15 | temperature | 30 | 4320 | < th | dose independent | rect. | 3 | 6 |
| 74 | 101.48 | wind | 1 | 43200 | > th | dose independent | rect. | 4 | 8 |
| 77 | 102.22 | wind | 1 | 1440 | < th | dose dependent | rect. | 6 | 4 |
| 82 | 102.61 | wind | 1 | 43200 | < th | dose dependent | rect. | 4 | 8 |
| 84 | 102.66 | wind | 1 | 1440 | < th | dose independent | rect. | 6 | 4 |
| 85 | 102.70 | wind | 1 | 1440 | < th | dose independent | rect. | 6 | 2 |
| 88 | 102.86 | wind | 1 | 43200 | > th | dose independent | rect. | 23 | 13 |
| 99 | 103.16 | wind | 3 | 43200 | < th | dose dependent | rect. | 5 | 2 |
| 102 | 103.25 | wind | 1 | 1440 | > th | dose independent | rect. | 6 | 4 |
| 123 | 103.53 | wind | 1 | 43200 | > th | dose independent | rect. | 5 | 6 |
| 127 | 103.74 | wind | 1 | 1440 | > th | dose independent | rect. | 6 | 1 |
| 128 | 103.76 | wind | 1 | 43200 | > th | dose independent | sin | 6 | NA |
| 131 | 103.87 | wind | 1 | 43200 | > th | dose independent | rect. | 6 | 3 |
| 133 | 103.88 | wind | 1 | 43200 | < th | dose independent | rect. | 19 | 17 |
| 134 | 103.92 | wind | 1 | 43200 | > th | dose independent | rect. | 19 | 16 |
| 138 | 104.02 | wind | 1 | 43200 | < th | dose dependent | sin | 4 | NA |
| 142 | 104.06 | wind | 1 | 43200 | < th | dose independent | rect. | 21 | 15 |
| 144 | 104.07 | wind | 1 | 43200 | < th | dose dependent | rect. | 24 | 13 |
| 155 | 104.35 | wind | 1 | 43200 | < th | dose independent | rect. | 23 | 13 |
| 182 | 104.56 | wind | 1 | 43200 | < th | dose independent | rect. | 3 | 9 |
| 209 | 104.99 | wind | 1 | 43200 | < th | dose dependent | rect. | 1 | 21 |
| 225 | 105.26 | wind | 1 | 43200 | < th | dose dependent | rect. | 3 | 20 |
| 236 | 105.39 | radiation | 40 | 1440 | > th | dose independent | rect. | 8 | 1 |
| 290 | 105.71 | radiation | 40 | 1440 | < th | dose independent | rect. | 24 | 9 |
| 294 | 105.73 | radiation | 40 | 1440 | < th | dose independent | rect. | 3 | 6 |
| 324 | 106.00 | radiation | 10 | 4320 | > th | dose independent | rect. | 17 | 13 |
| 334 | 106.05 | wind | 1 | 43200 | < th | dose dependent | rect. | 20 | 21 |
| 340 | 106.08 | radiation | 40 | 1440 | < th | dose independent | rect. | 19 | 14 |
| 366 | 106.33 | wind | 1 | 43200 | < th | dose independent | sin | 5 | NA |
| 375 | 106.42 | radiation | 40 | 1440 | < th | dose independent | rect. | 8 | 1 |
| 377 | 106.42 | wind | 1 | 43200 | < th | dose dependent | rect. | 16 | 21 |
| 378 | 106.42 | wind | 1 | 43200 | < th | dose dependent | rect. | 18 | 23 |
| 381 | 106.46 | radiation | 10 | 4320 | > th | dose independent | rect. | 17 | 1 |
| 398 | 106.48 | wind | 1 | 43200 | < th | dose dependent | rect. | 3 | 15 |
| 419 | 106.64 | wind | 1 | 43200 | < th | dose dependent | rect. | 11 | 23 |
| 437 | 106.75 | wind | 1 | 43200 | > th | dose dependent | rect. | 5 | 2 |
| 460 | 106.88 | humidity | 80 | 14400 | > th | dose independent | rect. | 19 | 1 |
| 484 | 107.00 | radiation | 20 | 4320 | > th | dose independent | rect. | 6 | 2 |
| 524 | 107.17 | wind | 1 | 43200 | < th | dose dependent | no | NA | NA |
| 532 | 107.21 | humidity | 80 | 14400 | > th | dose dependent | rect. | 7 | 1 |
| 553 | 107.26 | humidity | 80 | 14400 | > th | dose independent | rect. | 18 | 3 |
| 558 | 107.28 | radiation | 20 | 4320 | < th | dose independent | rect. | 17 | 15 |
| 564 | 107.30 | wind | 1 | 43200 | < th | dose dependent | rect. | 9 | 23 |
| 565 | 107.31 | radiation | 20 | 4320 | < th | dose independent | rect. | 3 | 5 |
| 569 | 107.32 | radiation | 20 | 4320 | < th | dose independent | rect. | 1 | 7 |
| 577 | 107.35 | radiation | 20 | 4320 | < th | dose independent | rect. | 19 | 13 |
| 614 | 107.53 | humidity | 80 | 14400 | < th | dose independent | rect. | 19 | 1 |
| 621 | 107.57 | humidity | 80 | 14400 | > th | dose dependent | rect. | 20 | 1 |
| 624 | 107.61 | humidity | 80 | 14400 | < th | dose independent | rect. | 18 | 3 |
| 631 | 107.65 | humidity | 80 | 14400 | > th | dose independent | rect. | 7 | 3 |
| 691 | 108.00 | humidity | 80 | 14400 | < th | dose independent | rect. | 8 | 3 |
| 703 | 108.05 | radiation | 30 | 4320 | > th | dose dependent | rect. | 8 | 1 |
| 705 | 108.09 | wind | 3 | 43200 | < th | dose independent | rect. | 5 | 2 |
| 756 | 108.29 | humidity | 90 | 14400 | > th | dose dependent | rect. | 6 | 11 |
| 778 | 108.38 | radiation | 30 | 4320 | < th | dose dependent | rect. | 18 | 11 |
| 783 | 108.41 | humidity | 90 | 14400 | < th | dose independent | rect. | 6 | 2 |
| 822 | 108.54 | humidity | 90 | 14400 | > th | dose dependent | rect. | 6 | 8 |
| 827 | 108.55 | wind | 3 | 43200 | < th | dose independent | rect. | 2 | 5 |
| 847 | 108.59 | humidity | 70 | 14400 | < th | dose independent | rect. | 12 | 1 |
| 913 | 108.79 | wind | 3 | 43200 | > th | dose independent | rect. | 2 | 5 |
| 939 | 108.81 | wind | 1 | 43200 | > th | dose dependent | rect. | 23 | 9 |
| 966 | 108.85 | wind | 5 | 43200 | < th | dose dependent | sin | 8 | NA |
| 1000 | 108.92 | wind | 1 | 43200 | < th | dose independent | rect. | 11 | 22 |