Os07g0160500
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os07g0160500 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 79.19 | 0.418 | 7.44 | -0.834 | 2.09 | -0.562 | -0.314 | -0.792 | -0.239 | 5.83 | 24.8 | 1364 | -- | -- |
| 80.36 | 0.418 | 7.44 | -1.02 | 2.09 | -0.555 | -0.247 | -- | -0.234 | 5.83 | 24.73 | 1405 | -- | -- |
| 79.43 | 0.415 | 7.44 | -0.844 | 2.09 | -0.564 | -- | -0.766 | -0.24 | 5.84 | 24.79 | 1364 | -- | -- |
| 80.1 | 0.417 | 7.47 | -1.08 | 2.09 | -0.62 | -- | -- | -0.312 | 5.82 | 24.7 | 1402 | -- | -- |
| 301.16 | 0.808 | 7.46 | -0.958 | -- | -0.903 | -- | -0.657 | -0.304 | -- | 24.8 | 1277 | -- | -- |
| 91.55 | 0.449 | 7.42 | -0.874 | 2.15 | -- | -0.285 | -- | -0.101 | 5.74 | -- | -- | -- | -- |
| 91.75 | 0.449 | 7.42 | -0.875 | 2.15 | -- | -- | -- | -0.1 | 5.75 | -- | -- | -- | -- |
| 300.7 | 0.808 | 7.51 | -1.14 | -- | -0.989 | -- | -- | -0.367 | -- | 25 | 1304 | -- | -- |
| 108.32 | 0.485 | 7.42 | -- | 2.11 | -0.306 | -- | -- | -0.107 | 5.77 | 24.6 | 1366 | -- | -- |
| 331 | 0.85 | 7.45 | -0.808 | -- | -- | -- | -- | -0.0493 | -- | -- | -- | -- | -- |
| 111.94 | 0.495 | 7.4 | -- | 2.13 | -- | -- | -- | -0.00252 | 5.77 | -- | -- | -- | -- |
| 331.27 | 0.848 | 7.48 | -- | -- | -0.695 | -- | -- | -0.174 | -- | 25 | 1275 | -- | -- |
| 348.23 | 0.871 | 7.43 | -- | -- | -- | -- | -- | 0.0404 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 73.10 | temperature | 20 | 720 | > th | dose dependent | rect. | 23 | 12 |
| 14 | 74.82 | temperature | 10 | 720 | > th | dose dependent | rect. | 24 | 11 |
| 21 | 75.02 | temperature | 20 | 720 | > th | dose dependent | sin | 7 | NA |
| 24 | 75.07 | temperature | 10 | 720 | > th | dose dependent | rect. | 2 | 9 |
| 43 | 75.67 | temperature | 30 | 720 | < th | dose dependent | rect. | 5 | 4 |
| 47 | 75.83 | temperature | 25 | 270 | > th | dose independent | rect. | 23 | 20 |
| 100 | 76.62 | temperature | 25 | 720 | < th | dose independent | rect. | 22 | 14 |
| 101 | 76.62 | temperature | 10 | 720 | > th | dose dependent | rect. | 23 | 7 |
| 107 | 76.66 | temperature | 30 | 720 | < th | dose dependent | rect. | 22 | 12 |
| 109 | 76.69 | temperature | 25 | 720 | > th | dose independent | rect. | 23 | 13 |
| 115 | 76.75 | temperature | 20 | 720 | > th | dose dependent | rect. | 2 | 3 |
| 156 | 77.08 | temperature | 10 | 30 | > th | dose dependent | rect. | 23 | 23 |
| 192 | 77.38 | temperature | 30 | 720 | < th | dose dependent | sin | 7 | NA |
| 197 | 77.43 | temperature | 25 | 270 | < th | dose independent | rect. | 5 | 10 |
| 249 | 77.72 | temperature | 25 | 720 | < th | dose independent | sin | 6 | NA |
| 329 | 78.12 | temperature | 25 | 270 | < th | dose independent | sin | 3 | NA |
| 389 | 78.40 | temperature | 30 | 270 | < th | dose dependent | rect. | 5 | 11 |
| 405 | 78.48 | temperature | 25 | 720 | > th | dose independent | sin | 6 | NA |
| 414 | 78.50 | temperature | 25 | 270 | > th | dose independent | sin | 2 | NA |
| 430 | 78.56 | temperature | 20 | 30 | > th | dose dependent | rect. | 10 | 12 |
| 456 | 78.61 | temperature | 20 | 1440 | > th | dose dependent | rect. | 23 | 2 |
| 539 | 78.87 | temperature | 25 | 270 | > th | dose independent | rect. | 7 | 11 |
| 601 | 79.02 | temperature | 20 | 720 | > th | dose dependent | rect. | 9 | 2 |
| 610 | 79.04 | temperature | 20 | 1440 | > th | dose dependent | rect. | 21 | 5 |
| 618 | 79.06 | temperature | 20 | 270 | > th | dose dependent | rect. | 16 | 23 |
| 639 | 79.11 | temperature | 30 | 270 | < th | dose dependent | rect. | 19 | 22 |
| 669 | 79.16 | temperature | 30 | 270 | < th | dose dependent | rect. | 5 | 23 |
| 710 | 79.25 | temperature | 20 | 90 | > th | dose dependent | rect. | 9 | 23 |
| 749 | 79.34 | temperature | 25 | 4320 | > th | dose independent | rect. | 23 | 1 |
| 766 | 79.37 | temperature | 25 | 1440 | < th | dose independent | rect. | 10 | 19 |
| 779 | 79.39 | temperature | 25 | 30 | > th | dose independent | rect. | 10 | 12 |
| 811 | 79.48 | temperature | 25 | 1440 | < th | dose independent | rect. | 13 | 16 |
| 822 | 79.50 | temperature | 25 | 1440 | < th | dose independent | rect. | 8 | 21 |
| 834 | 79.52 | temperature | 30 | 270 | < th | dose dependent | no | NA | NA |
| 848 | 79.54 | temperature | 20 | 270 | > th | dose dependent | rect. | 14 | 23 |
| 849 | 79.55 | temperature | 25 | 720 | > th | dose independent | rect. | 10 | 1 |
| 856 | 79.56 | temperature | 25 | 1440 | < th | dose independent | rect. | 20 | 21 |
| 871 | 79.57 | temperature | 30 | 270 | < th | dose dependent | rect. | 15 | 23 |
| 872 | 79.58 | temperature | 25 | 1440 | > th | dose independent | rect. | 10 | 19 |
| 882 | 79.58 | temperature | 20 | 270 | > th | dose dependent | rect. | 7 | 23 |
| 894 | 79.60 | temperature | 20 | 270 | > th | dose dependent | no | NA | NA |