Os07g0158900
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Cyclin-like F-box domain containing protein.
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Os07g0158900 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Cyclin-like F-box domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 25.45 | 0.237 | 11.5 | 0.542 | 0.495 | 0.902 | -0.181 | 0.455 | 0.555 | 1.85 | 21.39 | 1337 | -- | -- |
| 25.96 | 0.237 | 11.6 | 0.46 | 0.502 | 0.848 | -0.132 | -- | 0.548 | 1.79 | 21.4 | 1325 | -- | -- |
| 25.57 | 0.236 | 11.5 | 0.544 | 0.499 | 0.91 | -- | 0.457 | 0.554 | 1.77 | 21.4 | 1363 | -- | -- |
| 25.97 | 0.237 | 11.6 | 0.433 | 0.491 | 0.869 | -- | -- | 0.531 | 1.79 | 21.4 | 1328 | -- | -- |
| 38.54 | 0.289 | 11.5 | 0.513 | -- | 0.928 | -- | 0.288 | 0.567 | -- | 21.3 | 1101 | -- | -- |
| 47.23 | 0.322 | 11.5 | 0.782 | 0.544 | -- | -0.246 | -- | 0.77 | 1.87 | -- | -- | -- | -- |
| 47.46 | 0.323 | 11.5 | 0.79 | 0.543 | -- | -- | -- | 0.772 | 1.79 | -- | -- | -- | -- |
| 38.26 | 0.288 | 11.6 | 0.51 | -- | 0.811 | -- | -- | 0.521 | -- | 22.29 | 1075 | -- | -- |
| 28.83 | 0.25 | 11.6 | -- | 0.509 | 0.997 | -- | -- | 0.439 | 1.42 | 21.5 | 3009 | -- | -- |
| 65.33 | 0.378 | 11.5 | 0.812 | -- | -- | -- | -- | 0.784 | -- | -- | -- | -- | -- |
| 63.91 | 0.374 | 11.5 | -- | 0.557 | -- | -- | -- | 0.684 | 1.83 | -- | -- | -- | -- |
| 42.35 | 0.303 | 11.6 | -- | -- | 1.07 | -- | -- | 0.416 | -- | 21.59 | 2518 | -- | -- |
| 82.73 | 0.425 | 11.5 | -- | -- | -- | -- | -- | 0.694 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 24.87 | temperature | 25 | 1440 | < th | dose dependent | rect. | 22 | 3 |
| 2 | 24.90 | temperature | 25 | 1440 | < th | dose dependent | rect. | 21 | 5 |
| 5 | 24.91 | temperature | 25 | 1440 | < th | dose dependent | rect. | 20 | 11 |
| 10 | 24.93 | temperature | 25 | 1440 | < th | dose dependent | sin | 10 | NA |
| 45 | 25.00 | temperature | 10 | 1440 | > th | dose dependent | rect. | 21 | 11 |
| 261 | 25.33 | temperature | 10 | 1440 | > th | dose dependent | sin | 9 | NA |
| 483 | 25.68 | temperature | 25 | 1440 | < th | dose dependent | no | NA | NA |
| 549 | 25.78 | temperature | 25 | 1440 | < th | dose dependent | rect. | 5 | 23 |
| 561 | 25.80 | temperature | 25 | 1440 | < th | dose dependent | rect. | 3 | 1 |
| 570 | 25.80 | temperature | 25 | 1440 | < th | dose dependent | rect. | 3 | 23 |
| 616 | 25.89 | temperature | 25 | 1440 | < th | dose dependent | rect. | 5 | 1 |