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Notice!
This gene did NOT pass the analysis criteria (log2(expression) > 5 in more than 80% of samples & normality of residuals was not rejected).
The modeling results may be unreliable.

Os07g0154900

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Conserved hypothetical protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 3.16 (0.0199) R2 : 0.00402
β1 : -- (--) R2dD : -- R2D : --
β2 : -- (--) R2dC : -- R2C : --
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.0567 (0.0418) R2dN8 : 0.00519 R2N8 : 0.00402
σ : 0.374
deviance : 64.19
__
_____
C
peak time of C : --
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = temperature, response mode = > th, dose dependency = dose dependent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
61.72 0.369 3.13 0.327 0.0655 -0.394 0.193 2.09 0.118 15.6 26.3 23 -- --
62.78 0.372 3.16 0.132 0.0458 -0.218 0.405 -- 0.073 15.2 26.3 24 -- --
61.81 0.366 3.13 0.348 0.0644 -0.399 -- 2.31 0.124 15.8 26.3 23 -- --
63.28 0.373 3.15 0.136 0.0428 -0.187 -- -- 0.0746 16.8 26.3 23 -- --
61.98 0.367 3.13 0.331 -- -0.336 -- 2.23 0.119 -- 26.3 24 -- --
63.44 0.373 3.16 0.102 0.0283 -- -0.317 -- 0.0665 2.35 -- -- -- --
63.8 0.374 3.16 0.11 0.0316 -- -- -- 0.0686 0.0624 -- -- -- --
63.36 0.372 3.15 0.13 -- -0.155 -- -- 0.0727 -- 26.3 23 -- --
63.75 0.374 3.16 -- 0.0319 -0.155 -- -- 0.0589 17.5 26.3 23 -- --
63.86 0.373 3.15 0.111 -- -- -- -- 0.0691 -- -- -- -- --
64.12 0.375 3.16 -- 0.0331 -- -- -- 0.0563 0.249 -- -- -- --
63.8 0.373 3.16 -- -- -0.135 -- -- 0.058 -- 26.3 23 -- --
64.19 0.374 3.16 -- -- -- -- -- 0.0567 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 59.35 atmosphere 1005.0 30 > th dose independent rect. 2 1
2 59.35 atmosphere 1005.0 30 > th dose dependent rect. 2 1
3 59.37 temperature 20.0 30 > th dose dependent rect. 2 1
5 59.39 temperature 20.0 30 > th dose independent rect. 2 1
9 59.42 wind 3.0 30 < th dose independent rect. 2 1
10 59.42 wind 3.0 30 < th dose dependent rect. 2 1
17 59.47 humidity 80.0 30 > th dose independent rect. 2 1
19 59.48 temperature 10.0 30 > th dose independent rect. 2 1
21 59.48 temperature 30.0 30 < th dose independent rect. 2 1
22 59.48 humidity 50.0 30 > th dose independent rect. 2 1
26 59.48 atmosphere 1010.0 30 < th dose independent rect. 2 1
28 59.48 radiation 1.0 30 < th dose independent rect. 2 1
33 59.48 precipitation 0.1 30 < th dose independent rect. 2 1
34 59.48 temperature 10.0 30 > th dose independent rect. 3 23
35 59.48 humidity 50.0 30 > th dose dependent rect. 2 1
36 59.48 radiation 1.0 30 < th dose dependent rect. 2 1
41 59.48 precipitation 0.1 30 < th dose dependent rect. 2 1
48 59.59 radiation 1.0 14400 < th dose dependent rect. 3 1
53 59.67 atmosphere 1015.0 30 < th dose dependent rect. 2 1
54 59.69 temperature 30.0 30 < th dose dependent rect. 2 1
64 59.84 wind 1.0 30 > th dose independent rect. 2 1
76 59.88 wind 9.0 1440 < th dose independent rect. 3 1
77 59.88 temperature 10.0 1440 > th dose independent rect. 3 1
80 59.88 temperature 30.0 1440 < th dose independent rect. 3 1
84 59.88 humidity 50.0 1440 > th dose independent rect. 3 1
93 59.88 atmosphere 995.0 1440 > th dose independent rect. 3 1
94 59.88 radiation 1.0 1440 < th dose independent rect. 3 1
114 59.88 temperature 10.0 1440 > th dose independent rect. 4 23
126 59.93 atmosphere 995.0 30 > th dose independent rect. 21 23
161 60.20 wind 9.0 30 < th dose independent rect. 3 23
163 60.21 radiation 1.0 14400 < th dose dependent rect. 21 1
169 60.27 temperature 25.0 30 > th dose dependent rect. 20 4
189 60.38 humidity 90.0 30 < th dose dependent rect. 20 1
190 60.39 temperature 10.0 1440 > th dose independent rect. 21 1
193 60.39 temperature 30.0 1440 < th dose independent rect. 21 1
197 60.39 humidity 50.0 1440 > th dose independent rect. 21 1
203 60.39 humidity 90.0 30 < th dose independent rect. 20 1
204 60.39 atmosphere 1005.0 30 > th dose independent rect. 20 1
205 60.39 atmosphere 995.0 1440 > th dose independent rect. 21 1
206 60.39 radiation 1.0 1440 < th dose independent rect. 21 1
226 60.39 temperature 10.0 1440 > th dose independent rect. 22 23
234 60.40 atmosphere 1005.0 30 > th dose dependent rect. 20 1
240 60.42 wind 3.0 30 > th dose independent rect. 20 1
241 60.42 wind 5.0 30 < th dose independent rect. 20 1
243 60.42 temperature 20.0 30 > th dose independent rect. 20 1
249 60.43 temperature 10.0 30 > th dose independent rect. 20 1
252 60.43 temperature 30.0 30 < th dose independent rect. 20 1
253 60.43 humidity 50.0 30 > th dose independent rect. 20 1
256 60.43 atmosphere 995.0 30 > th dose independent rect. 20 1
258 60.43 atmosphere 1010.0 30 < th dose independent rect. 20 1
260 60.43 radiation 1.0 30 < th dose independent rect. 20 1
265 60.43 precipitation 0.1 30 < th dose independent rect. 20 1
266 60.43 temperature 10.0 30 > th dose independent rect. 21 23
267 60.43 wind 1.0 30 > th dose dependent rect. 20 1
268 60.43 wind 9.0 30 < th dose dependent rect. 20 1
269 60.43 temperature 10.0 30 > th dose dependent rect. 20 1
273 60.43 radiation 1.0 30 < th dose dependent rect. 20 1
278 60.43 precipitation 0.1 30 < th dose dependent rect. 20 1
282 60.44 humidity 50.0 30 > th dose dependent rect. 20 1
283 60.45 precipitation 0.1 30 < th dose independent rect. 21 23
285 60.45 precipitation 0.1 30 < th dose dependent rect. 21 23
289 60.46 atmosphere 1015.0 30 < th dose dependent rect. 20 1
291 60.47 temperature 30.0 30 < th dose dependent rect. 20 1
309 60.54 wind 9.0 30 < th dose independent rect. 21 23
331 60.56 atmosphere 995.0 30 > th dose independent rect. 12 19
343 60.59 atmosphere 995.0 90 > th dose dependent rect. 18 9
351 60.62 atmosphere 1005.0 270 > th dose dependent rect. 17 4
353 60.63 precipitation 0.1 30 < th dose independent rect. 3 23
356 60.63 temperature 10.0 30 > th dose dependent rect. 3 17
357 60.63 precipitation 0.1 30 < th dose dependent rect. 3 23
359 60.65 humidity 70.0 90 > th dose independent rect. 10 1
360 60.65 humidity 70.0 270 > th dose independent rect. 17 19
369 60.68 humidity 80.0 270 > th dose independent rect. 8 1
370 60.68 atmosphere 995.0 10 > th dose independent rect. 12 8
372 60.68 atmosphere 995.0 30 > th dose independent rect. 3 23
376 60.71 temperature 25.0 720 > th dose dependent rect. 4 4
401 60.78 humidity 50.0 30 > th dose dependent rect. 7 5
403 60.79 temperature 25.0 720 > th dose independent rect. 3 6
407 60.81 atmosphere 1010.0 30 < th dose independent rect. 12 19
414 60.84 temperature 20.0 720 > th dose dependent rect. 3 1
415 60.84 temperature 15.0 30 > th dose dependent rect. 3 4
421 60.85 atmosphere 1000.0 30 > th dose dependent rect. 20 7
423 60.86 temperature 25.0 720 > th dose independent rect. 4 4
436 60.89 humidity 70.0 90 > th dose independent rect. 6 21
453 60.93 radiation 10.0 1440 > th dose independent rect. 17 13
454 60.93 humidity 60.0 30 > th dose independent rect. 20 16
458 60.94 temperature 20.0 30 > th dose dependent rect. 20 7
467 60.97 temperature 10.0 30 > th dose dependent rect. 21 23
471 60.99 radiation 10.0 1440 > th dose independent rect. 17 1
485 60.99 atmosphere 995.0 90 > th dose independent rect. 3 15
504 61.00 humidity 70.0 90 > th dose independent rect. 9 18
513 61.01 atmosphere 1005.0 270 > th dose independent rect. 16 8
520 61.03 atmosphere 995.0 30 > th dose independent rect. 3 17
523 61.04 temperature 15.0 30 > th dose independent rect. 12 19
529 61.05 atmosphere 1005.0 30 > th dose independent rect. 20 7
539 61.06 atmosphere 1015.0 30 < th dose independent rect. 20 16
547 61.07 temperature 10.0 10 > th dose dependent rect. 4 14
549 61.08 radiation 10.0 1440 < th dose independent rect. 17 1
552 61.08 radiation 10.0 1440 < th dose independent rect. 17 11
563 61.09 humidity 70.0 270 > th dose independent rect. 7 5
564 61.09 radiation 10.0 1440 < th dose independent rect. 17 8
566 61.10 precipitation 0.1 1440 < th dose independent rect. 21 1
567 61.10 atmosphere 1005.0 90 > th dose independent rect. 17 10
569 61.10 precipitation 0.1 1440 < th dose dependent rect. 21 1
572 61.11 temperature 20.0 30 > th dose independent rect. 3 4
573 61.11 temperature 10.0 1440 > th dose independent rect. 8 5
576 61.11 atmosphere 995.0 1440 > th dose independent rect. 8 5
581 61.11 temperature 10.0 1440 > th dose independent rect. 13 19
584 61.11 radiation 40.0 90 < th dose independent rect. 7 20
587 61.12 radiation 10.0 1440 < th dose independent rect. 17 5
588 61.12 humidity 70.0 90 > th dose independent rect. 18 9
597 61.13 wind 1.0 10 > th dose independent rect. 12 8
604 61.14 radiation 10.0 1440 < th dose independent rect. 17 3
605 61.14 wind 1.0 30 > th dose independent rect. 7 5
608 61.14 temperature 25.0 270 > th dose dependent rect. 17 10
610 61.15 temperature 10.0 30 > th dose independent rect. 7 5
612 61.15 atmosphere 995.0 30 > th dose independent rect. 7 5
613 61.15 atmosphere 1015.0 30 < th dose independent rect. 7 5
615 61.15 precipitation 0.1 30 < th dose independent rect. 20 16
620 61.15 radiation 40.0 1440 < th dose dependent rect. 18 10
621 61.15 precipitation 0.1 30 < th dose dependent rect. 20 16
624 61.16 temperature 25.0 270 < th dose independent rect. 6 7
627 61.16 atmosphere 1015.0 30 < th dose independent rect. 7 20
628 61.16 atmosphere 1010.0 30 < th dose independent rect. 21 23
629 61.16 temperature 25.0 720 > th dose dependent rect. 18 2
633 61.17 precipitation 0.1 30 < th dose independent rect. 7 5
637 61.17 humidity 90.0 1440 > th dose dependent rect. 7 3
639 61.17 precipitation 0.1 30 < th dose dependent rect. 7 5
651 61.18 wind 5.0 90 < th dose independent rect. 18 9
652 61.18 temperature 25.0 270 > th dose independent rect. 17 10
657 61.19 humidity 90.0 90 < th dose independent rect. 2 1
659 61.19 wind 9.0 30 < th dose independent rect. 7 5
660 61.19 precipitation 0.1 30 < th dose independent rect. 12 8
661 61.19 wind 9.0 30 < th dose independent rect. 12 19
663 61.19 humidity 70.0 270 > th dose dependent rect. 8 2
665 61.19 precipitation 0.1 30 < th dose dependent rect. 12 8
670 61.20 temperature 10.0 1440 > th dose independent rect. 13 8
673 61.20 atmosphere 1010.0 10 < th dose independent rect. 12 8
675 61.20 temperature 10.0 1440 > th dose independent rect. 21 16
678 61.20 atmosphere 995.0 1440 > th dose independent rect. 21 16
685 61.21 atmosphere 1005.0 270 > th dose independent rect. 17 4
687 61.21 temperature 10.0 30 > th dose independent rect. 12 8
692 61.21 temperature 10.0 30 > th dose independent rect. 20 16
694 61.21 atmosphere 995.0 30 > th dose independent rect. 20 16
698 61.21 wind 7.0 30 < th dose dependent rect. 3 4
709 61.22 wind 9.0 30 < th dose independent rect. 12 8
714 61.22 wind 9.0 30 < th dose independent rect. 20 16
745 61.24 humidity 60.0 30 > th dose independent rect. 7 5
755 61.25 wind 5.0 30 < th dose independent rect. 3 4
758 61.25 radiation 40.0 90 < th dose independent rect. 7 5
764 61.25 temperature 25.0 720 > th dose dependent rect. 17 4
773 61.26 temperature 10.0 30 > th dose independent rect. 3 4
775 61.26 temperature 30.0 30 < th dose independent rect. 3 4
776 61.26 humidity 50.0 30 > th dose independent rect. 3 4
779 61.26 atmosphere 995.0 30 > th dose independent rect. 3 4
780 61.26 atmosphere 1015.0 30 < th dose independent rect. 3 4
781 61.26 radiation 20.0 30 < th dose independent rect. 3 4
785 61.26 humidity 70.0 720 > th dose independent rect. 19 6
786 61.26 wind 5.0 30 < th dose independent rect. 20 7
789 61.26 wind 9.0 30 < th dose independent rect. 7 20
790 61.26 temperature 10.0 30 > th dose independent rect. 7 20
795 61.26 humidity 50.0 30 > th dose dependent rect. 3 4
801 61.26 temperature 10.0 30 > th dose dependent rect. 20 7
827 61.28 precipitation 0.1 10 < th dose independent rect. 7 20
833 61.28 atmosphere 1005.0 10 > th dose dependent rect. 18 5
835 61.28 radiation 1.0 720 < th dose dependent rect. 24 7
837 61.28 radiation 10.0 1440 > th dose dependent rect. 17 13
838 61.28 precipitation 0.1 10 < th dose dependent rect. 7 20
840 61.29 temperature 30.0 30 < th dose independent rect. 7 5
857 61.30 radiation 10.0 1440 > th dose dependent rect. 17 1
885 61.31 temperature 30.0 10 < th dose independent rect. 20 16
886 61.31 precipitation 0.1 30 < th dose independent rect. 12 19
896 61.31 precipitation 0.1 30 < th dose dependent rect. 12 19
902 61.32 temperature 30.0 720 < th dose independent rect. 15 6
930 61.33 precipitation 0.1 30 < th dose independent rect. 3 4
931 61.33 atmosphere 1015.0 30 < th dose independent rect. 20 7
938 61.33 radiation 40.0 30 < th dose dependent rect. 3 4
939 61.33 precipitation 0.1 30 < th dose dependent rect. 3 4
949 61.34 atmosphere 1010.0 30 < th dose independent rect. 3 17
957 61.34 temperature 15.0 10 > th dose dependent rect. 24 7
969 61.35 atmosphere 1015.0 30 < th dose dependent rect. 7 5
974 61.35 atmosphere 1015.0 10 < th dose dependent rect. 16 15
976 61.35 humidity 60.0 30 > th dose dependent rect. 7 20
979 61.36 temperature 25.0 720 > th dose dependent rect. 8 1
991 61.36 atmosphere 995.0 270 > th dose dependent rect. 16 8
999 61.36 temperature 25.0 30 > th dose dependent rect. 24 20