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Os07g0154300

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Conserved hypothetical protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 10.9 (0.0148) R2 : 0.39
β1 : -- (--) R2dD : -- R2D : --
β2 : 0.604 (0.0383) R2dC : 0.333 R2C : 0.325
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.191 (0.0312) R2dN8 : 0.065 R2N8 : 0.0567
σ : 0.28
deviance : 35.73
__
_____
C
peak time of C : 4.58
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = radiation, response mode = < th, dose dependency = dose independent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
26.49 0.242 10.9 0.131 0.586 -0.277 0.248 -2.35 0.16 4.61 19.98 4316 -- --
31.7 0.262 10.9 0.0294 0.588 -0.343 0.369 -- 0.12 4.44 30 5664 -- --
26.21 0.238 10.9 0.134 0.583 -0.278 -- -2.46 0.16 4.67 19.99 4148 -- --
31.81 0.263 10.9 0.0283 0.588 -0.35 -- -- 0.12 4.7 30.01 5642 -- --
44.41 0.31 10.9 0.14 -- -0.273 -- -2.59 0.164 -- 19.99 4148 -- --
35.47 0.279 10.9 0.0249 0.601 -- 0.304 -- 0.195 4.53 -- -- -- --
35.71 0.28 10.9 0.0229 0.604 -- -- -- 0.194 4.58 -- -- -- --
50.14 0.33 10.9 0.00938 -- -0.394 -- -- 0.116 -- 30 5641 -- --
31.82 0.263 10.9 -- 0.586 -0.346 -- -- 0.12 4.71 30.01 5642 -- --
55.14 0.347 10.9 0.0462 -- -- -- -- 0.21 -- -- -- -- --
35.73 0.28 10.9 -- 0.604 -- -- -- 0.191 4.58 -- -- -- --
50.15 0.33 10.9 -- -- -0.39 -- -- 0.115 -- 30 5641 -- --
55.2 0.347 10.9 -- -- -- -- -- 0.205 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 23.93 radiation 30.0 14400 < th dose independent rect. 1 8
2 23.94 radiation 30.0 14400 < th dose independent rect. 6 3
7 23.94 radiation 30.0 14400 < th dose independent rect. 17 16
17 24.18 radiation 10.0 14400 < th dose independent rect. 17 14
22 24.24 radiation 20.0 14400 > th dose dependent rect. 7 1
65 24.37 humidity 60.0 43200 < th dose independent rect. 14 1
69 24.46 radiation 10.0 14400 < th dose independent rect. 3 4
70 24.46 radiation 20.0 4320 < th dose independent rect. 16 4
80 24.47 radiation 1.0 14400 > th dose dependent rect. 18 12
90 24.51 radiation 20.0 4320 < th dose independent rect. 16 12
96 24.55 humidity 60.0 43200 > th dose independent rect. 14 2
116 24.60 humidity 80.0 43200 > th dose dependent rect. 8 2
144 24.65 humidity 90.0 43200 < th dose independent rect. 3 11
147 24.65 humidity 90.0 43200 < th dose independent rect. 3 13
156 24.67 radiation 1.0 14400 > th dose dependent rect. 4 2
159 24.67 precipitation 0.1 43200 > th dose dependent rect. 18 4
167 24.68 radiation 10.0 14400 < th dose independent sin 12 NA
175 24.70 humidity 60.0 43200 > th dose independent rect. 14 5
176 24.70 humidity 80.0 43200 > th dose dependent rect. 5 6
177 24.71 radiation 30.0 14400 < th dose independent sin 11 NA
179 24.71 humidity 90.0 43200 < th dose independent rect. 4 5
194 24.73 radiation 10.0 14400 < th dose independent rect. 10 21
226 24.76 radiation 10.0 14400 < th dose independent rect. 17 20
228 24.77 radiation 10.0 43200 > th dose independent rect. 5 1
246 24.77 radiation 10.0 14400 < th dose independent rect. 17 22
257 24.80 precipitation 0.1 43200 > th dose independent rect. 18 4
259 24.80 wind 5.0 43200 > th dose independent rect. 5 9
266 24.81 precipitation 0.1 43200 < th dose independent rect. 18 4
277 24.81 precipitation 0.1 43200 < th dose dependent rect. 18 4
284 24.82 wind 9.0 43200 < th dose independent rect. 19 11
291 24.82 radiation 10.0 14400 < th dose independent rect. 13 22
296 24.83 wind 5.0 43200 < th dose independent rect. 5 9
307 24.84 radiation 10.0 14400 < th dose independent no NA NA
310 24.84 radiation 10.0 14400 < th dose independent rect. 5 14
313 24.84 radiation 10.0 14400 < th dose independent rect. 2 16
375 24.85 humidity 90.0 43200 < th dose independent sin 2 NA
401 24.86 wind 9.0 43200 > th dose independent rect. 19 11
413 24.87 humidity 80.0 43200 > th dose dependent rect. 19 2
416 24.88 humidity 70.0 14400 < th dose independent rect. 19 1
423 24.88 humidity 90.0 43200 > th dose independent rect. 4 12
444 24.90 precipitation 0.1 43200 < th dose independent rect. 20 2
446 24.90 wind 9.0 43200 < th dose independent rect. 19 6
450 24.90 precipitation 0.1 43200 < th dose dependent rect. 20 2
452 24.90 humidity 80.0 43200 > th dose dependent rect. 4 18
454 24.91 precipitation 0.1 43200 > th dose independent rect. 20 2
470 24.92 humidity 70.0 14400 < th dose independent rect. 19 12
478 24.93 radiation 10.0 14400 < th dose independent sin 5 NA
495 24.94 radiation 10.0 14400 < th dose independent sin 2 NA
519 24.95 radiation 10.0 14400 < th dose independent sin 0 NA
522 24.95 humidity 90.0 43200 > th dose independent rect. 8 6
528 24.95 wind 5.0 43200 > th dose dependent rect. 5 4
532 24.96 radiation 10.0 14400 < th dose independent sin 22 NA
575 24.97 radiation 10.0 14400 < th dose independent rect. 2 13
597 24.98 radiation 10.0 14400 < th dose independent rect. 5 10
604 24.98 wind 5.0 43200 > th dose independent rect. 24 14
633 24.99 radiation 10.0 14400 < th dose independent rect. 9 10
636 24.99 humidity 80.0 43200 < th dose independent rect. 9 12
644 24.99 radiation 10.0 14400 < th dose independent rect. 9 18
648 24.99 humidity 70.0 43200 > th dose dependent rect. 17 2
660 25.00 wind 5.0 43200 < th dose independent rect. 24 14
674 25.01 humidity 90.0 43200 > th dose independent rect. 8 1
709 25.02 humidity 90.0 43200 > th dose independent sin 1 NA
755 25.03 humidity 80.0 43200 < th dose independent rect. 15 5
758 25.03 wind 9.0 43200 > th dose independent rect. 19 7
810 25.04 precipitation 0.1 43200 > th dose independent rect. 14 8
811 25.04 precipitation 0.1 43200 < th dose independent rect. 14 8
812 25.04 humidity 80.0 43200 < th dose independent rect. 12 9
853 25.04 precipitation 0.1 43200 < th dose dependent rect. 14 8
857 25.05 humidity 90.0 43200 < th dose independent rect. 8 1
878 25.05 humidity 80.0 43200 > th dose dependent sin 1 NA
884 25.05 precipitation 0.1 43200 > th dose dependent rect. 14 9
886 25.05 wind 7.0 43200 > th dose dependent rect. 19 12
906 25.06 precipitation 0.1 43200 > th dose dependent rect. 16 7
919 25.07 radiation 10.0 14400 < th dose independent rect. 13 6
935 25.07 humidity 80.0 43200 > th dose independent rect. 9 12
948 25.07 radiation 1.0 14400 > th dose dependent rect. 18 1
949 25.07 precipitation 0.1 43200 > th dose dependent rect. 21 1
968 25.08 humidity 80.0 43200 < th dose independent rect. 10 1
971 25.08 humidity 80.0 43200 > th dose independent rect. 16 4