Os07g0152700
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Glutathione S-transferase, N-terminal domain containing protein.
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Os07g0152700 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Glutathione S-transferase, N-terminal domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = humidity,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 227.85 | 0.709 | 3.44 | -1.27 | 0.411 | -0.15 | -1.3 | 5.07 | 1.36 | 7.33 | 92.27 | 4942 | -- | -- |
| 244.06 | 0.728 | 3.51 | -0.436 | 0.38 | 0.662 | -0.683 | -- | 1.46 | 7.29 | 67 | 2766 | -- | -- |
| 231.04 | 0.708 | 3.45 | -1.3 | 0.384 | -0.167 | -- | 5.08 | 1.37 | 7.61 | 92 | 5714 | -- | -- |
| 244.86 | 0.729 | 3.5 | -0.444 | 0.403 | 0.679 | -- | -- | 1.48 | 6.84 | 67.66 | 2720 | -- | -- |
| 239.16 | 0.72 | 3.44 | -1.3 | -- | -0.137 | -- | 5.13 | 1.41 | -- | 92.49 | 5700 | -- | -- |
| 258.62 | 0.754 | 3.49 | -0.504 | 0.406 | -- | -0.608 | -- | 1.53 | 7.28 | -- | -- | -- | -- |
| 259.5 | 0.754 | 3.49 | -0.515 | 0.405 | -- | -- | -- | 1.53 | 7.67 | -- | -- | -- | -- |
| 249.76 | 0.736 | 3.5 | -0.4 | -- | 0.776 | -- | -- | 1.53 | -- | 68.09 | 2139 | -- | -- |
| 249.95 | 0.736 | 3.49 | -- | 0.389 | 0.725 | -- | -- | 1.52 | 6.65 | 67.09 | 2653 | -- | -- |
| 268.33 | 0.765 | 3.5 | -0.51 | -- | -- | -- | -- | 1.54 | -- | -- | -- | -- | -- |
| 266.5 | 0.764 | 3.48 | -- | 0.401 | -- | -- | -- | 1.59 | 7.76 | -- | -- | -- | -- |
| 253.59 | 0.742 | 3.48 | -- | -- | 0.865 | -- | -- | 1.63 | -- | 69.31 | 2114 | -- | -- |
| 275.19 | 0.774 | 3.49 | -- | -- | -- | -- | -- | 1.59 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 211.46 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 6 | 10 |
| 2 | 211.69 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 6 | 10 |
| 3 | 211.69 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 6 | 10 |
| 22 | 213.74 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 9 | 1 |
| 23 | 213.74 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 9 | 1 |
| 28 | 213.92 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 9 | 1 |
| 29 | 213.92 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 9 | 1 |
| 44 | 215.28 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 14 | 2 |
| 45 | 215.28 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 14 | 2 |
| 46 | 215.38 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 14 | 2 |
| 47 | 215.38 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 14 | 2 |
| 48 | 215.51 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 6 | 10 |
| 49 | 215.58 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 7 | 3 |
| 50 | 215.58 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 7 | 3 |
| 52 | 215.76 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 7 | 3 |
| 53 | 215.76 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 7 | 3 |
| 58 | 216.46 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 5 | 8 |
| 66 | 216.70 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 5 | 5 |
| 68 | 216.79 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 5 | 6 |
| 69 | 216.79 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 5 | 6 |
| 94 | 217.34 | temperature | 30.0 | 14400 | < th | dose dependent | rect. | 13 | 1 |
| 95 | 217.56 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 12 | 5 |
| 99 | 217.71 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 9 | 8 |
| 130 | 218.81 | humidity | 80.0 | 14400 | < th | dose independent | rect. | 13 | 1 |
| 132 | 218.88 | temperature | 25.0 | 14400 | < th | dose dependent | rect. | 8 | 2 |
| 135 | 218.95 | humidity | 90.0 | 14400 | > th | dose independent | rect. | 12 | 2 |
| 136 | 218.95 | temperature | 25.0 | 14400 | < th | dose dependent | rect. | 7 | 8 |
| 137 | 218.96 | wind | 9.0 | 14400 | > th | dose dependent | rect. | 5 | 7 |
| 172 | 219.35 | temperature | 10.0 | 14400 | > th | dose dependent | rect. | 13 | 1 |
| 200 | 219.68 | humidity | 70.0 | 14400 | > th | dose dependent | rect. | 13 | 1 |
| 207 | 219.75 | temperature | 20.0 | 14400 | < th | dose independent | rect. | 16 | 5 |
| 211 | 219.78 | temperature | 20.0 | 14400 | < th | dose independent | rect. | 11 | 10 |
| 223 | 219.84 | wind | 9.0 | 14400 | < th | dose independent | rect. | 5 | 6 |
| 229 | 219.89 | temperature | 20.0 | 14400 | < th | dose independent | rect. | 18 | 2 |
| 232 | 219.92 | humidity | 80.0 | 14400 | < th | dose independent | rect. | 12 | 5 |
| 253 | 220.04 | temperature | 20.0 | 14400 | < th | dose independent | rect. | 7 | 15 |
| 289 | 220.24 | humidity | 80.0 | 14400 | > th | dose independent | rect. | 10 | 8 |
| 329 | 220.42 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 15 | 1 |
| 340 | 220.45 | humidity | 90.0 | 14400 | > th | dose independent | rect. | 20 | 4 |
| 343 | 220.46 | humidity | 90.0 | 14400 | > th | dose independent | rect. | 19 | 6 |
| 394 | 220.68 | temperature | 20.0 | 14400 | > th | dose independent | rect. | 7 | 14 |
| 458 | 220.90 | wind | 1.0 | 43200 | > th | dose dependent | rect. | 4 | 3 |
| 461 | 220.91 | temperature | 20.0 | 14400 | > th | dose independent | rect. | 17 | 2 |
| 476 | 220.97 | temperature | 25.0 | 14400 | < th | dose dependent | sin | 23 | NA |
| 499 | 221.03 | wind | 9.0 | 43200 | < th | dose dependent | rect. | 4 | 3 |
| 519 | 221.09 | temperature | 20.0 | 14400 | > th | dose independent | rect. | 10 | 11 |
| 605 | 221.37 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 7 | 22 |
| 623 | 221.43 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 12 | 16 |
| 663 | 221.56 | wind | 9.0 | 14400 | > th | dose independent | rect. | 6 | 5 |
| 695 | 221.64 | temperature | 20.0 | 14400 | < th | dose independent | sin | 20 | NA |
| 701 | 221.65 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 9 | 5 |
| 745 | 221.78 | temperature | 20.0 | 14400 | < th | dose independent | rect. | 7 | 1 |
| 786 | 221.87 | temperature | 10.0 | 14400 | > th | dose dependent | sin | 23 | NA |
| 793 | 221.88 | temperature | 20.0 | 14400 | > th | dose independent | sin | 21 | NA |
| 819 | 221.93 | humidity | 90.0 | 14400 | > th | dose independent | rect. | 16 | 12 |
| 837 | 221.97 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 15 | 13 |
| 852 | 222.00 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 2 | 20 |
| 853 | 222.01 | temperature | 20.0 | 14400 | > th | dose independent | rect. | 7 | 1 |
| 864 | 222.02 | wind | 9.0 | 43200 | < th | dose dependent | rect. | 5 | 1 |
| 884 | 222.06 | humidity | 80.0 | 14400 | > th | dose independent | rect. | 10 | 1 |
| 925 | 222.14 | wind | 9.0 | 43200 | < th | dose dependent | rect. | 1 | 6 |
| 939 | 222.18 | wind | 1.0 | 43200 | > th | dose dependent | rect. | 1 | 6 |
| 967 | 222.22 | wind | 3.0 | 43200 | > th | dose independent | rect. | 5 | 1 |
| 977 | 222.24 | wind | 3.0 | 43200 | > th | dose independent | rect. | 1 | 7 |
| 998 | 222.29 | wind | 3.0 | 43200 | > th | dose independent | rect. | 4 | 4 |