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Notice!
This gene did NOT pass the analysis criteria (log2(expression) > 5 in more than 80% of samples & normality of residuals was not rejected).
The modeling results may be unreliable.

Os07g0151700

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Conserved hypothetical protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 2.94 (0.0365) R2 : 0.149
β1 : -- (--) R2dD : -- R2D : --
β2 : -- (--) R2dC : -- R2C : --
β3 : 5.71 (0.641) R2dE : 0.149 R2E : 0.148
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.0164 (0.0769) R2dN8 : 8.84e-05 R2N8 : -0.000202
σ : 0.686
deviance : 216.85
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_____
C
peak time of C : --
E
wheather : wind
threshold : 7.104
memory length : 69
response mode : > th
dose dependency : dose dependent
G
type of G : rect.
peak or start time of G : 13.1
open length of G : 0.356

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = wind, response mode = > th, dose dependency = dose dependent, type of G = rect.)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
215.44 0.69 2.96 0.0984 0.152 8.49 -0.022 13.1 0.00857 13.4 7.036 59 13.1 1.03
216.49 0.685 2.93 0.0231 0.106 5.68 -0.158 -- 0.0348 11 7.591 74 12.9 0.949
215.43 0.684 2.96 0.1 0.15 8.53 -- 13.5 0.0083 13.4 7 58 13.1 1.02
215.66 0.684 2.94 0.0287 0.133 5.78 -- -- 0.0245 12.6 7.657 89 13.1 0.5
216.81 0.686 2.96 0.101 -- 8.67 -- 13.7 0.00681 -- 6.981 59 13.1 1.05
251.17 0.743 2.95 -0.0312 0.228 -- -0.279 -- -0.00989 13.9 -- -- -- --
251.47 0.743 2.95 -0.0399 0.228 -- -- -- -0.0115 13.8 -- -- -- --
217.07 0.686 2.94 0.0106 -- 5.78 -- -- 0.00425 -- 7.189 70 12.5 0.934
215.45 0.684 2.94 -- 0.159 5.83 -- -- 0.0116 13.5 7.244 75 13.1 0.55
254.62 0.746 2.95 -0.0492 -- -- -- -- -0.0168 -- -- -- -- --
251.52 0.742 2.95 -- 0.229 -- -- -- -0.00711 13.8 -- -- -- --
216.85 0.686 2.94 -- -- 5.71 -- -- 0.0164 -- 7.104 69 13.1 0.356
254.68 0.745 2.95 -- -- -- -- -- -0.0113 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 215.70 wind 7.0 90 > th dose dependent rect. 13 1
2 215.80 wind 7.0 10 > th dose dependent rect. 13 1
11 216.47 wind 9.0 10 > th dose independent rect. 13 1
94 231.46 temperature 20.0 90 < th dose dependent rect. 18 1
95 231.48 temperature 20.0 90 < th dose independent rect. 18 1
98 231.61 radiation 10.0 30 < th dose independent rect. 13 2
113 232.14 atmosphere 1005.0 10 > th dose independent rect. 13 1
129 233.42 wind 5.0 90 > th dose independent rect. 22 3
148 234.94 atmosphere 1005.0 10 > th dose dependent rect. 13 1
153 235.17 radiation 10.0 30 < th dose independent rect. 10 5
157 235.28 wind 3.0 90 > th dose dependent rect. 22 4
163 235.51 wind 3.0 90 > th dose dependent rect. 23 2
179 236.09 temperature 25.0 720 < th dose dependent rect. 14 2
181 236.22 radiation 30.0 10 < th dose dependent rect. 14 1
194 236.51 wind 5.0 270 > th dose dependent rect. 19 6
197 236.63 wind 5.0 270 > th dose independent rect. 19 6
201 236.84 wind 3.0 10 < th dose independent rect. 18 13
204 236.91 wind 3.0 10 < th dose independent rect. 16 15
240 237.37 wind 5.0 270 > th dose dependent rect. 19 12
249 237.43 wind 3.0 10 > th dose dependent rect. 18 10
263 237.51 wind 5.0 10 > th dose dependent rect. 19 6
314 237.86 humidity 60.0 10 > th dose independent rect. 13 1
326 237.91 precipitation 0.1 270 > th dose independent rect. 22 1
327 237.91 precipitation 0.1 270 > th dose dependent rect. 22 1
333 237.96 temperature 20.0 90 < th dose dependent rect. 13 7
383 238.25 radiation 10.0 10 < th dose independent rect. 18 21
397 238.32 wind 7.0 10 < th dose dependent rect. 19 12
409 238.38 wind 9.0 10 > th dose independent rect. 13 7
425 238.51 wind 7.0 10 < th dose dependent rect. 17 14
458 238.72 humidity 90.0 10 < th dose independent rect. 13 1
477 238.83 wind 5.0 90 < th dose independent sin 11 NA
479 238.85 wind 5.0 270 < th dose independent rect. 16 13
486 238.89 wind 3.0 10 > th dose independent rect. 22 6
525 239.20 wind 3.0 10 > th dose dependent sin 10 NA
529 239.23 radiation 20.0 90 < th dose independent rect. 18 20
539 239.31 temperature 25.0 720 < th dose independent rect. 14 1
577 239.50 humidity 80.0 720 < th dose independent rect. 24 1
579 239.50 humidity 80.0 720 < th dose dependent rect. 24 1
592 239.56 humidity 80.0 10 < th dose independent rect. 24 5
616 239.67 humidity 80.0 10 < th dose dependent rect. 24 5
632 239.75 wind 3.0 10 > th dose dependent rect. 24 1
674 239.82 radiation 10.0 10 < th dose dependent rect. 6 9
691 239.90 temperature 30.0 10 < th dose independent rect. 13 1
709 239.93 humidity 80.0 30 < th dose independent rect. 23 1
712 239.93 humidity 80.0 30 < th dose dependent rect. 23 1
716 239.94 radiation 10.0 270 < th dose independent rect. 16 22
718 239.94 radiation 40.0 90 < th dose dependent rect. 12 2
750 239.99 temperature 30.0 90 < th dose dependent rect. 12 1
771 240.07 atmosphere 1000.0 90 < th dose independent rect. 8 3
806 240.17 wind 3.0 10 > th dose independent rect. 18 10
814 240.20 temperature 25.0 720 > th dose independent rect. 14 3
820 240.21 atmosphere 1000.0 90 < th dose independent rect. 6 5
825 240.24 wind 5.0 90 > th dose independent sin 11 NA
829 240.26 temperature 20.0 90 < th dose independent rect. 13 7
848 240.32 radiation 20.0 10 < th dose dependent rect. 18 21
913 240.51 humidity 90.0 90 > th dose independent rect. 18 1
917 240.53 wind 3.0 90 > th dose dependent sin 11 NA
939 240.61 atmosphere 1000.0 10 < th dose independent rect. 9 1
956 240.63 humidity 90.0 90 > th dose dependent rect. 18 2
957 240.63 wind 9.0 270 > th dose dependent rect. 19 19
963 240.65 temperature 30.0 10 < th dose dependent rect. 13 2
979 240.69 wind 5.0 720 < th dose independent rect. 19 1
999 240.74 temperature 10.0 10 > th dose independent rect. 13 1