Os07g0151300
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : MAGE protein family protein.
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Os07g0151300 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : MAGE protein family protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 99.37 | 0.468 | 3.94 | 0.91 | 1.61 | -1.12 | 1.78 | 0.221 | 0.253 | 19 | 29.6 | 332 | -- | -- |
| 99.18 | 0.464 | 3.94 | 0.933 | 1.6 | -1.08 | 1.79 | -- | 0.235 | 19 | 29.44 | 332 | -- | -- |
| 107.23 | 0.482 | 3.93 | 0.973 | 1.61 | -1.09 | -- | -0.38 | 0.289 | 18.9 | 29.58 | 328 | -- | -- |
| 107.13 | 0.482 | 3.93 | 0.882 | 1.57 | -1.21 | -- | -- | 0.261 | 19 | 29.51 | 328 | -- | -- |
| 177.8 | 0.621 | 3.94 | 0.716 | -- | -2.06 | -- | -0.429 | 0.00111 | -- | 28.5 | 467 | -- | -- |
| 126.86 | 0.528 | 3.94 | 1.11 | 2.05 | -- | 2.44 | -- | 0.271 | 18.6 | -- | -- | -- | -- |
| 141.83 | 0.558 | 3.94 | 1.07 | 2.06 | -- | -- | -- | 0.278 | 18.6 | -- | -- | -- | -- |
| 177.41 | 0.62 | 3.95 | 0.66 | -- | -2.04 | -- | -- | -0.0248 | -- | 28.28 | 467 | -- | -- |
| 127.21 | 0.525 | 3.96 | -- | 1.51 | -1.36 | -- | -- | 0.181 | 19.1 | 29.5 | 334 | -- | -- |
| 362.09 | 0.889 | 3.89 | 1.02 | -- | -- | -- | -- | 0.237 | -- | -- | -- | -- | -- |
| 172.14 | 0.614 | 3.96 | -- | 2.04 | -- | -- | -- | 0.159 | 18.6 | -- | -- | -- | -- |
| 188.62 | 0.64 | 3.97 | -- | -- | -2.12 | -- | -- | -0.103 | -- | 28.29 | 477 | -- | -- |
| 389.69 | 0.921 | 3.92 | -- | -- | -- | -- | -- | 0.123 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 82.38 | temperature | 20.0 | 10 | > th | dose dependent | rect. | 13 | 9 |
| 3 | 83.26 | temperature | 20.0 | 10 | > th | dose dependent | rect. | 13 | 7 |
| 64 | 89.03 | temperature | 25.0 | 10 | > th | dose independent | rect. | 13 | 7 |
| 78 | 89.32 | radiation | 40.0 | 270 | < th | dose dependent | rect. | 8 | 17 |
| 79 | 89.33 | radiation | 40.0 | 270 | < th | dose independent | rect. | 8 | 15 |
| 85 | 89.45 | temperature | 25.0 | 30 | > th | dose dependent | rect. | 13 | 19 |
| 86 | 89.51 | temperature | 25.0 | 90 | > th | dose independent | rect. | 13 | 7 |
| 101 | 89.85 | radiation | 40.0 | 270 | < th | dose independent | rect. | 8 | 17 |
| 104 | 89.99 | temperature | 30.0 | 270 | < th | dose independent | rect. | 8 | 15 |
| 132 | 90.79 | temperature | 30.0 | 270 | < th | dose independent | rect. | 7 | 18 |
| 136 | 90.85 | radiation | 1.0 | 270 | > th | dose dependent | rect. | 12 | 20 |
| 155 | 91.21 | radiation | 40.0 | 270 | < th | dose independent | rect. | 7 | 6 |
| 190 | 91.77 | temperature | 30.0 | 270 | < th | dose independent | rect. | 7 | 5 |
| 223 | 92.38 | radiation | 1.0 | 270 | > th | dose dependent | rect. | 12 | 7 |
| 247 | 92.64 | radiation | 40.0 | 270 | < th | dose independent | rect. | 8 | 3 |
| 261 | 92.84 | temperature | 30.0 | 270 | < th | dose independent | rect. | 8 | 3 |
| 274 | 93.09 | radiation | 10.0 | 270 | > th | dose independent | rect. | 12 | 19 |
| 307 | 93.58 | wind | 7.0 | 270 | < th | dose independent | rect. | 11 | 21 |
| 317 | 93.70 | radiation | 10.0 | 270 | > th | dose independent | rect. | 12 | 6 |
| 335 | 93.74 | temperature | 30.0 | 270 | < th | dose independent | rect. | 17 | 19 |
| 343 | 93.86 | temperature | 30.0 | 90 | < th | dose independent | rect. | 10 | 15 |
| 348 | 94.03 | temperature | 25.0 | 270 | > th | dose dependent | rect. | 13 | 1 |
| 354 | 94.12 | humidity | 90.0 | 10 | < th | dose dependent | rect. | 13 | 19 |
| 362 | 94.26 | radiation | 1.0 | 270 | > th | dose dependent | sin | 16 | NA |
| 392 | 94.36 | humidity | 90.0 | 10 | < th | dose dependent | rect. | 13 | 8 |
| 410 | 94.71 | wind | 7.0 | 270 | < th | dose independent | rect. | 12 | 19 |
| 480 | 95.41 | radiation | 40.0 | 270 | < th | dose dependent | sin | 16 | NA |
| 525 | 95.79 | atmosphere | 1000.0 | 270 | > th | dose independent | rect. | 8 | 3 |
| 534 | 95.91 | temperature | 10.0 | 30 | > th | dose dependent | rect. | 13 | 19 |
| 543 | 96.10 | radiation | 40.0 | 270 | < th | dose independent | rect. | 17 | 20 |
| 561 | 96.28 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 11 | 21 |
| 563 | 96.28 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 11 | 21 |
| 570 | 96.36 | humidity | 80.0 | 10 | < th | dose independent | rect. | 13 | 7 |
| 602 | 96.50 | temperature | 25.0 | 270 | > th | dose dependent | sin | 22 | NA |
| 640 | 96.73 | radiation | 40.0 | 270 | < th | dose independent | rect. | 18 | 18 |
| 642 | 96.74 | humidity | 90.0 | 270 | < th | dose independent | rect. | 12 | 6 |
| 670 | 96.90 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 12 | 19 |
| 671 | 96.90 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 12 | 19 |
| 672 | 96.92 | temperature | 25.0 | 90 | > th | dose dependent | sin | 19 | NA |
| 674 | 96.93 | humidity | 80.0 | 10 | < th | dose independent | rect. | 13 | 19 |
| 685 | 97.06 | atmosphere | 1015.0 | 10 | < th | dose dependent | rect. | 13 | 7 |
| 714 | 97.21 | atmosphere | 1000.0 | 270 | > th | dose independent | rect. | 7 | 5 |
| 718 | 97.22 | temperature | 10.0 | 270 | > th | dose independent | rect. | 8 | 3 |
| 720 | 97.22 | atmosphere | 1015.0 | 270 | < th | dose independent | rect. | 8 | 3 |
| 721 | 97.22 | temperature | 10.0 | 270 | > th | dose independent | rect. | 11 | 21 |
| 731 | 97.25 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 8 | 3 |
| 732 | 97.25 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 8 | 3 |
| 752 | 97.34 | wind | 9.0 | 270 | < th | dose independent | rect. | 8 | 3 |
| 754 | 97.34 | humidity | 90.0 | 10 | < th | dose dependent | rect. | 13 | 15 |
| 758 | 97.36 | radiation | 1.0 | 270 | > th | dose independent | rect. | 8 | 3 |
| 763 | 97.39 | atmosphere | 1015.0 | 90 | < th | dose dependent | rect. | 13 | 6 |
| 766 | 97.42 | radiation | 40.0 | 90 | < th | dose dependent | sin | 13 | NA |
| 779 | 97.47 | temperature | 15.0 | 270 | > th | dose independent | rect. | 8 | 15 |
| 803 | 97.56 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 2 | 15 |
| 828 | 97.63 | wind | 1.0 | 270 | > th | dose independent | rect. | 8 | 3 |
| 852 | 97.75 | temperature | 30.0 | 270 | < th | dose dependent | rect. | 8 | 13 |
| 862 | 97.80 | temperature | 10.0 | 270 | > th | dose independent | rect. | 7 | 5 |
| 864 | 97.80 | atmosphere | 1015.0 | 270 | < th | dose independent | rect. | 7 | 5 |
| 865 | 97.80 | temperature | 10.0 | 270 | > th | dose independent | rect. | 12 | 19 |
| 882 | 97.87 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 7 | 5 |
| 885 | 97.87 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 7 | 5 |
| 916 | 97.95 | humidity | 50.0 | 270 | > th | dose independent | rect. | 8 | 3 |
| 937 | 98.07 | temperature | 25.0 | 270 | > th | dose dependent | rect. | 2 | 15 |
| 960 | 98.10 | temperature | 25.0 | 270 | > th | dose dependent | rect. | 5 | 12 |
| 963 | 98.11 | wind | 9.0 | 270 | < th | dose independent | rect. | 7 | 5 |
| 966 | 98.13 | radiation | 20.0 | 270 | > th | dose independent | sin | 16 | NA |