Os07g0151200
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Major facilitator superfamily protein.
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Os07g0151200 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Major facilitator superfamily protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 164.18 | 0.602 | 12.6 | 0.661 | 1.37 | 0.493 | 0.154 | -2.35 | -0.161 | 20.2 | 20.61 | 3790 | -- | -- |
| 169.48 | 0.606 | 12.5 | 0.908 | 1.37 | 0.934 | 0.0204 | -- | -0.154 | 20.2 | 21.12 | 11233 | -- | -- |
| 164.25 | 0.597 | 12.6 | 0.658 | 1.37 | 0.496 | -- | -2.34 | -0.159 | 20.2 | 20.6 | 3796 | -- | -- |
| 169.33 | 0.606 | 12.5 | 0.835 | 1.33 | 0.97 | -- | -- | -0.141 | 20.3 | 20.5 | 11198 | -- | -- |
| 247.87 | 0.733 | 12.5 | 0.635 | -- | 0.751 | -- | -1.95 | -0.258 | -- | 26.56 | 536 | -- | -- |
| 186.82 | 0.641 | 12.5 | 1.61 | 1.37 | -- | 0.0707 | -- | 0.194 | 20.3 | -- | -- | -- | -- |
| 186.84 | 0.64 | 12.5 | 1.61 | 1.37 | -- | -- | -- | 0.194 | 20.3 | -- | -- | -- | -- |
| 230.11 | 0.707 | 12.5 | 1.37 | -- | 1.21 | -- | -- | 0.0322 | -- | 28.1 | 542 | -- | -- |
| 170.15 | 0.608 | 12.6 | -- | 1.36 | 1.54 | -- | -- | -0.279 | 20.3 | 17.3 | 47520 | -- | -- |
| 291.44 | 0.798 | 12.4 | 1.6 | -- | -- | -- | -- | 0.179 | -- | -- | -- | -- | -- |
| 255.34 | 0.747 | 12.5 | -- | 1.37 | -- | -- | -- | 0.0148 | 20.4 | -- | -- | -- | -- |
| 273.72 | 0.771 | 12.5 | -- | -- | 1.56 | -- | -- | -0.316 | -- | 17.24 | 47520 | -- | -- |
| 359.24 | 0.885 | 12.5 | -- | -- | -- | -- | -- | 0.00147 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 157.96 | humidity | 90 | 14400 | > th | dose dependent | rect. | 5 | 11 |
| 7 | 158.30 | humidity | 90 | 14400 | > th | dose dependent | rect. | 6 | 1 |
| 27 | 159.05 | humidity | 90 | 14400 | > th | dose dependent | sin | 1 | NA |
| 38 | 159.52 | temperature | 25 | 720 | < th | dose dependent | rect. | 4 | 5 |
| 41 | 159.68 | temperature | 20 | 1440 | > th | dose independent | rect. | 24 | 4 |
| 42 | 159.72 | temperature | 20 | 1440 | < th | dose independent | rect. | 24 | 4 |
| 51 | 159.86 | temperature | 20 | 1440 | > th | dose independent | rect. | 3 | 1 |
| 55 | 159.93 | temperature | 20 | 1440 | < th | dose independent | rect. | 3 | 1 |
| 66 | 160.03 | temperature | 20 | 720 | > th | dose dependent | rect. | 5 | 4 |
| 77 | 160.23 | temperature | 20 | 720 | > th | dose dependent | rect. | 4 | 7 |
| 112 | 160.80 | temperature | 20 | 720 | < th | dose independent | rect. | 23 | 17 |
| 113 | 160.81 | humidity | 90 | 14400 | > th | dose independent | rect. | 6 | 1 |
| 125 | 160.92 | temperature | 20 | 720 | < th | dose independent | rect. | 2 | 7 |
| 130 | 160.97 | atmosphere | 995 | 43200 | > th | dose independent | rect. | 20 | 17 |
| 132 | 160.99 | temperature | 20 | 720 | < th | dose independent | rect. | 3 | 4 |
| 134 | 161.00 | temperature | 20 | 720 | < th | dose independent | rect. | 23 | 10 |
| 143 | 161.06 | humidity | 90 | 14400 | > th | dose independent | rect. | 2 | 14 |
| 146 | 161.08 | temperature | 20 | 720 | < th | dose independent | sin | 6 | NA |
| 147 | 161.08 | atmosphere | 995 | 43200 | < th | dose independent | sin | 7 | NA |
| 154 | 161.13 | atmosphere | 995 | 43200 | < th | dose independent | rect. | 21 | 16 |
| 187 | 161.30 | atmosphere | 995 | 43200 | > th | dose independent | rect. | 22 | 14 |
| 207 | 161.38 | atmosphere | 995 | 43200 | > th | dose independent | sin | 7 | NA |
| 228 | 161.46 | humidity | 90 | 14400 | > th | dose independent | sin | 3 | NA |
| 248 | 161.54 | atmosphere | 995 | 43200 | > th | dose independent | rect. | 24 | 11 |
| 250 | 161.55 | atmosphere | 995 | 43200 | < th | dose independent | rect. | 23 | 12 |
| 271 | 161.68 | atmosphere | 995 | 43200 | < th | dose dependent | sin | 10 | NA |
| 275 | 161.69 | atmosphere | 995 | 43200 | < th | dose dependent | rect. | 12 | 20 |
| 306 | 161.79 | atmosphere | 995 | 43200 | > th | dose independent | rect. | 3 | 6 |
| 314 | 161.82 | humidity | 90 | 14400 | > th | dose dependent | rect. | 4 | 21 |
| 322 | 161.84 | atmosphere | 995 | 43200 | > th | dose independent | rect. | 5 | 3 |
| 330 | 161.86 | atmosphere | 995 | 43200 | < th | dose independent | rect. | 1 | 9 |
| 331 | 161.86 | atmosphere | 995 | 43200 | < th | dose dependent | rect. | 24 | 9 |
| 338 | 161.89 | atmosphere | 995 | 43200 | < th | dose independent | rect. | 3 | 6 |
| 341 | 161.91 | atmosphere | 995 | 43200 | > th | dose independent | rect. | 1 | 9 |
| 396 | 162.08 | temperature | 20 | 720 | > th | dose dependent | rect. | 23 | 12 |
| 482 | 162.37 | atmosphere | 995 | 43200 | < th | dose dependent | rect. | 12 | 16 |
| 494 | 162.40 | humidity | 90 | 14400 | > th | dose dependent | no | NA | NA |
| 529 | 162.51 | humidity | 90 | 14400 | > th | dose dependent | rect. | 11 | 23 |
| 543 | 162.55 | humidity | 90 | 14400 | < th | dose independent | rect. | 2 | 14 |
| 550 | 162.57 | atmosphere | 995 | 43200 | < th | dose dependent | rect. | 4 | 4 |
| 657 | 162.91 | atmosphere | 995 | 43200 | < th | dose independent | rect. | 4 | 4 |
| 666 | 162.94 | temperature | 20 | 4320 | < th | dose independent | rect. | 6 | 1 |
| 679 | 162.97 | humidity | 90 | 14400 | > th | dose independent | rect. | 6 | 5 |
| 688 | 162.98 | temperature | 30 | 720 | < th | dose dependent | sin | 5 | NA |
| 705 | 163.03 | humidity | 90 | 14400 | < th | dose independent | sin | 3 | NA |
| 711 | 163.04 | humidity | 90 | 14400 | < th | dose independent | rect. | 6 | 10 |
| 747 | 163.12 | humidity | 90 | 14400 | > th | dose dependent | rect. | 18 | 1 |
| 787 | 163.22 | humidity | 90 | 14400 | > th | dose independent | rect. | 6 | 23 |
| 806 | 163.26 | humidity | 80 | 14400 | > th | dose dependent | rect. | 14 | 1 |
| 809 | 163.27 | humidity | 90 | 14400 | < th | dose independent | rect. | 6 | 2 |
| 828 | 163.31 | humidity | 90 | 14400 | > th | dose independent | rect. | 2 | 23 |
| 886 | 163.45 | humidity | 70 | 14400 | > th | dose independent | rect. | 14 | 1 |
| 889 | 163.46 | temperature | 20 | 1440 | > th | dose independent | sin | 9 | NA |
| 895 | 163.48 | humidity | 90 | 14400 | > th | dose independent | no | NA | NA |
| 919 | 163.52 | humidity | 90 | 14400 | > th | dose independent | rect. | 11 | 23 |
| 920 | 163.52 | temperature | 20 | 720 | > th | dose dependent | sin | 6 | NA |
| 944 | 163.55 | humidity | 90 | 14400 | > th | dose independent | rect. | 9 | 23 |
| 996 | 163.61 | temperature | 30 | 720 | < th | dose dependent | rect. | 22 | 16 |