Os07g0150700
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to Serine/threonine kinase.
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Os07g0150700 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to Serine/threonine kinase.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = wind,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 107.92 | 0.488 | 7.91 | -0.55 | 0.00889 | 0.605 | -2.05 | -0.0704 | 0.06 | 7.26 | 7.003 | 4246 | -- | -- |
| 107.91 | 0.484 | 7.91 | -0.552 | 0.00961 | 0.616 | -2.05 | -- | 0.0589 | 7.26 | 7.003 | 4233 | -- | -- |
| 118.56 | 0.507 | 7.93 | -0.631 | 0.0582 | 0.67 | -- | 0.252 | 0.0531 | 12.7 | 7.014 | 4244 | -- | -- |
| 118.07 | 0.506 | 7.92 | -0.6 | 0.118 | 0.633 | -- | -- | 0.0453 | 13.2 | 7.001 | 4243 | -- | -- |
| 119.15 | 0.508 | 7.91 | -0.595 | -- | 0.624 | -- | -0.0504 | 0.055 | -- | 7.1 | 4265 | -- | -- |
| 115.22 | 0.503 | 7.92 | -0.771 | 0.0415 | -- | -2.12 | -- | 0.00412 | 7.16 | -- | -- | -- | -- |
| 125.84 | 0.525 | 7.92 | -0.809 | 0.148 | -- | -- | -- | 0.0118 | 12.4 | -- | -- | -- | -- |
| 119.13 | 0.508 | 7.91 | -0.585 | -- | 0.64 | -- | -- | 0.0561 | -- | 7.062 | 4254 | -- | -- |
| 125.81 | 0.522 | 7.9 | -- | 0.149 | 0.894 | -- | -- | 0.0859 | 14.5 | 7.075 | 4226 | -- | -- |
| 127.21 | 0.527 | 7.92 | -0.814 | -- | -- | -- | -- | 0.00935 | -- | -- | -- | -- | -- |
| 143.08 | 0.56 | 7.9 | -- | 0.16 | -- | -- | -- | 0.102 | 12.7 | -- | -- | -- | -- |
| 126.81 | 0.524 | 7.9 | -- | -- | 0.874 | -- | -- | 0.109 | -- | 7 | 4261 | -- | -- |
| 144.68 | 0.561 | 7.9 | -- | -- | -- | -- | -- | 0.0996 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 100.29 | temperature | 15.0 | 270 | > th | dose dependent | rect. | 6 | 2 |
| 4 | 100.83 | temperature | 15.0 | 90 | > th | dose dependent | rect. | 6 | 5 |
| 5 | 100.85 | humidity | 90.0 | 30 | < th | dose independent | rect. | 6 | 5 |
| 7 | 100.91 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 8 | 22 |
| 8 | 100.91 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 8 | 22 |
| 10 | 100.97 | wind | 7.0 | 90 | < th | dose independent | rect. | 11 | 19 |
| 17 | 101.28 | radiation | 1.0 | 270 | > th | dose independent | rect. | 4 | 4 |
| 29 | 101.33 | precipitation | 0.1 | 90 | < th | dose independent | rect. | 11 | 19 |
| 31 | 101.33 | precipitation | 0.1 | 90 | < th | dose dependent | rect. | 11 | 19 |
| 38 | 101.53 | temperature | 25.0 | 10 | > th | dose independent | rect. | 5 | 6 |
| 39 | 101.55 | wind | 7.0 | 270 | < th | dose independent | rect. | 8 | 22 |
| 44 | 101.72 | temperature | 20.0 | 90 | > th | dose independent | rect. | 6 | 5 |
| 45 | 101.76 | temperature | 15.0 | 1440 | > th | dose independent | rect. | 7 | 5 |
| 46 | 101.76 | wind | 9.0 | 90 | < th | dose dependent | rect. | 6 | 5 |
| 49 | 101.88 | temperature | 20.0 | 270 | > th | dose independent | rect. | 5 | 3 |
| 55 | 101.99 | humidity | 60.0 | 90 | > th | dose independent | rect. | 6 | 5 |
| 58 | 102.00 | temperature | 25.0 | 30 | > th | dose independent | rect. | 1 | 10 |
| 59 | 102.00 | wind | 7.0 | 270 | < th | dose dependent | rect. | 6 | 2 |
| 60 | 102.01 | wind | 3.0 | 270 | < th | dose independent | rect. | 6 | 2 |
| 62 | 102.04 | radiation | 1.0 | 90 | > th | dose independent | rect. | 4 | 7 |
| 84 | 102.23 | wind | 5.0 | 90 | < th | dose independent | rect. | 6 | 5 |
| 86 | 102.29 | temperature | 15.0 | 270 | > th | dose independent | rect. | 8 | 22 |
| 88 | 102.31 | precipitation | 0.1 | 90 | < th | dose independent | rect. | 6 | 5 |
| 89 | 102.31 | precipitation | 0.1 | 90 | < th | dose dependent | rect. | 6 | 5 |
| 92 | 102.33 | temperature | 15.0 | 90 | > th | dose independent | rect. | 11 | 19 |
| 95 | 102.35 | atmosphere | 995.0 | 90 | > th | dose independent | rect. | 6 | 5 |
| 96 | 102.35 | atmosphere | 1015.0 | 90 | < th | dose independent | rect. | 6 | 5 |
| 99 | 102.35 | radiation | 1.0 | 720 | < th | dose dependent | rect. | 8 | 8 |
| 102 | 102.37 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 9 | 20 |
| 104 | 102.37 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 9 | 20 |
| 113 | 102.50 | humidity | 60.0 | 14400 | > th | dose independent | rect. | 3 | 4 |
| 117 | 102.51 | atmosphere | 995.0 | 1440 | > th | dose independent | rect. | 7 | 5 |
| 118 | 102.51 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 12 | 19 |
| 127 | 102.62 | radiation | 1.0 | 720 | < th | dose independent | rect. | 8 | 8 |
| 157 | 102.86 | humidity | 70.0 | 270 | > th | dose independent | rect. | 6 | 2 |
| 158 | 102.86 | radiation | 30.0 | 270 | < th | dose independent | rect. | 6 | 2 |
| 161 | 102.91 | radiation | 1.0 | 720 | < th | dose dependent | rect. | 15 | 1 |
| 162 | 102.92 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 6 | 2 |
| 163 | 102.92 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 6 | 2 |
| 185 | 103.00 | temperature | 10.0 | 270 | > th | dose independent | rect. | 6 | 2 |
| 187 | 103.00 | temperature | 30.0 | 270 | < th | dose independent | rect. | 6 | 2 |
| 188 | 103.00 | humidity | 50.0 | 270 | > th | dose independent | rect. | 6 | 2 |
| 190 | 103.00 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 6 | 2 |
| 191 | 103.00 | atmosphere | 1015.0 | 270 | < th | dose independent | rect. | 6 | 2 |
| 207 | 103.09 | temperature | 15.0 | 270 | > th | dose independent | rect. | 9 | 20 |
| 211 | 103.13 | radiation | 10.0 | 30 | > th | dose independent | sin | 9 | NA |
| 212 | 103.13 | radiation | 1.0 | 270 | > th | dose dependent | rect. | 6 | 1 |
| 221 | 103.22 | radiation | 1.0 | 270 | > th | dose dependent | rect. | 18 | 13 |
| 226 | 103.24 | radiation | 1.0 | 270 | > th | dose dependent | rect. | 4 | 3 |
| 239 | 103.27 | humidity | 90.0 | 270 | < th | dose independent | rect. | 6 | 2 |
| 242 | 103.30 | wind | 1.0 | 30 | > th | dose independent | rect. | 6 | 5 |
| 248 | 103.32 | radiation | 1.0 | 720 | < th | dose dependent | rect. | 13 | 3 |
| 252 | 103.35 | temperature | 20.0 | 10 | > th | dose dependent | rect. | 1 | 10 |
| 294 | 103.53 | radiation | 1.0 | 30 | > th | dose dependent | sin | 10 | NA |
| 298 | 103.56 | atmosphere | 1015.0 | 90 | < th | dose dependent | rect. | 6 | 5 |
| 343 | 103.71 | wind | 9.0 | 90 | < th | dose dependent | rect. | 11 | 19 |
| 354 | 103.79 | atmosphere | 1015.0 | 30 | < th | dose independent | rect. | 6 | 21 |
| 360 | 103.84 | humidity | 50.0 | 270 | > th | dose dependent | rect. | 6 | 1 |
| 364 | 103.85 | precipitation | 0.1 | 1440 | < th | dose independent | rect. | 8 | 4 |
| 365 | 103.85 | precipitation | 0.1 | 1440 | < th | dose dependent | rect. | 8 | 4 |
| 369 | 103.89 | humidity | 90.0 | 90 | < th | dose independent | rect. | 1 | 10 |
| 382 | 103.97 | radiation | 10.0 | 4320 | < th | dose dependent | rect. | 3 | 2 |
| 394 | 104.06 | radiation | 40.0 | 270 | < th | dose independent | rect. | 5 | 4 |
| 395 | 104.06 | atmosphere | 995.0 | 30 | > th | dose dependent | rect. | 3 | 3 |
| 407 | 104.11 | atmosphere | 1015.0 | 270 | < th | dose dependent | rect. | 6 | 2 |
| 411 | 104.13 | temperature | 25.0 | 10 | < th | dose independent | rect. | 3 | 4 |
| 430 | 104.17 | temperature | 30.0 | 30 | < th | dose independent | rect. | 6 | 5 |
| 476 | 104.31 | atmosphere | 1000.0 | 30 | > th | dose independent | rect. | 3 | 3 |
| 494 | 104.43 | atmosphere | 995.0 | 30 | > th | dose independent | rect. | 11 | 19 |
| 498 | 104.45 | atmosphere | 1015.0 | 1440 | < th | dose independent | rect. | 3 | 4 |
| 499 | 104.45 | atmosphere | 995.0 | 90 | > th | dose dependent | rect. | 11 | 19 |
| 525 | 104.55 | temperature | 30.0 | 30 | < th | dose dependent | rect. | 3 | 3 |
| 539 | 104.65 | radiation | 30.0 | 4320 | < th | dose independent | rect. | 3 | 4 |
| 549 | 104.68 | humidity | 50.0 | 90 | > th | dose dependent | rect. | 6 | 5 |
| 550 | 104.68 | radiation | 10.0 | 30 | < th | dose dependent | rect. | 3 | 12 |
| 556 | 104.70 | radiation | 40.0 | 270 | < th | dose dependent | rect. | 6 | 1 |
| 575 | 104.80 | radiation | 1.0 | 4320 | < th | dose independent | rect. | 3 | 2 |
| 607 | 104.91 | radiation | 1.0 | 90 | < th | dose independent | rect. | 3 | 4 |
| 608 | 104.91 | radiation | 10.0 | 30 | < th | dose dependent | rect. | 3 | 3 |
| 621 | 104.93 | wind | 7.0 | 4320 | > th | dose independent | rect. | 12 | 4 |
| 631 | 104.96 | wind | 1.0 | 90 | > th | dose independent | rect. | 11 | 19 |
| 635 | 104.98 | wind | 7.0 | 4320 | > th | dose independent | rect. | 15 | 1 |
| 637 | 104.98 | radiation | 40.0 | 10 | < th | dose independent | rect. | 6 | 5 |
| 663 | 105.02 | wind | 7.0 | 4320 | < th | dose independent | rect. | 12 | 4 |
| 675 | 105.05 | humidity | 60.0 | 14400 | > th | dose independent | rect. | 1 | 6 |
| 686 | 105.08 | humidity | 80.0 | 14400 | > th | dose dependent | rect. | 3 | 5 |
| 688 | 105.12 | wind | 7.0 | 4320 | < th | dose independent | rect. | 15 | 1 |
| 705 | 105.17 | wind | 1.0 | 270 | > th | dose independent | rect. | 6 | 2 |
| 746 | 105.25 | atmosphere | 995.0 | 30 | > th | dose independent | rect. | 6 | 21 |
| 761 | 105.26 | atmosphere | 1005.0 | 10 | > th | dose dependent | rect. | 12 | 18 |
| 796 | 105.31 | atmosphere | 995.0 | 30 | > th | dose dependent | rect. | 6 | 5 |
| 891 | 105.40 | wind | 5.0 | 30 | < th | dose independent | rect. | 3 | 3 |
| 953 | 105.46 | precipitation | 0.1 | 30 | < th | dose independent | rect. | 3 | 3 |
| 956 | 105.46 | precipitation | 0.1 | 30 | < th | dose dependent | rect. | 3 | 3 |
| 983 | 105.48 | temperature | 15.0 | 30 | > th | dose independent | rect. | 6 | 21 |