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Os07g0150100

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Protein of unknown function DUF221 domain containing protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 12.6 (0.0258) R2 : 0.595
β1 : -- (--) R2dD : -- R2D : --
β2 : 1.27 (0.0637) R2dC : 0.373 R2C : 0.451
β3 : -0.886 (0.0861) R2dE : 0.112 R2E : 0.127
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.476 (0.057) R2dN8 : 0.0907 R2N8 : 0.0182
σ : 0.478
deviance : 105.15
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C
peak time of C : 1.89
E
wheather : humidity
threshold : 60.84
memory length : 1108
response mode : > th
dose dependency : dose independent
G
type of G : no
peak or start time of G : --
open length of G : --

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Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = humidity, response mode = > th, dose dependency = dose independent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
97.12 0.463 12.6 -0.0851 1.27 -0.885 1.4 -0.031 0.467 1.92 60.99 1088 -- --
97.13 0.459 12.6 -0.0865 1.27 -0.888 1.4 -- 0.467 1.92 60.92 1088 -- --
104.26 0.476 12.6 -0.0955 1.28 -0.857 -- -0.561 0.469 1.91 61 1107 -- --
104.68 0.477 12.6 -0.13 1.27 -0.905 -- -- 0.462 1.89 60.46 1108 -- --
181.91 0.628 12.7 0.0291 -- -1.2 -- -0.737 0.342 -- 68 1133 -- --
120.27 0.514 12.7 0.0861 1.42 -- 1.52 -- 0.287 1.74 -- -- -- --
129.39 0.533 12.7 0.0376 1.42 -- -- -- 0.279 1.74 -- -- -- --
180.34 0.625 12.7 -0.0619 -- -1.2 -- -- 0.305 -- 70 1146 -- --
105.15 0.478 12.6 -- 1.27 -0.886 -- -- 0.476 1.89 60.84 1108 -- --
252.27 0.742 12.6 0.0955 -- -- -- -- 0.311 -- -- -- -- --
129.42 0.532 12.7 -- 1.42 -- -- -- 0.275 1.74 -- -- -- --
175.49 0.617 12.7 -- -- -1.44 -- -- 0.161 -- 72 1112 -- --
252.51 0.742 12.6 -- -- -- -- -- 0.3 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 91.21 humidity 60.0 270 > th dose dependent rect. 19 6
7 91.94 humidity 50.0 270 > th dose dependent rect. 6 19
9 92.52 humidity 50.0 270 > th dose dependent rect. 5 21
31 93.82 humidity 50.0 90 > th dose dependent rect. 9 18
41 94.22 radiation 1.0 270 < th dose dependent rect. 5 21
66 94.85 radiation 40.0 1440 > th dose dependent rect. 13 20
73 95.08 radiation 40.0 1440 > th dose dependent rect. 13 2
94 95.16 humidity 50.0 270 > th dose dependent rect. 11 14
97 95.18 radiation 20.0 14400 > th dose dependent rect. 16 15
101 95.34 wind 9.0 270 < th dose independent rect. 5 10
103 95.37 radiation 40.0 14400 > th dose dependent rect. 15 18
120 95.74 temperature 15.0 90 > th dose independent rect. 3 17
122 95.76 temperature 10.0 270 > th dose independent rect. 5 10
123 95.76 atmosphere 1015.0 270 < th dose independent rect. 5 10
124 95.76 temperature 10.0 270 > th dose independent rect. 15 14
129 95.84 radiation 40.0 270 < th dose independent rect. 15 14
130 95.88 precipitation 0.1 270 < th dose independent rect. 5 10
131 95.88 precipitation 0.1 270 < th dose dependent rect. 5 10
132 95.89 radiation 20.0 14400 > th dose dependent rect. 16 2
152 95.95 wind 7.0 90 < th dose independent rect. 20 7
157 96.03 humidity 80.0 720 < th dose dependent rect. 17 16
159 96.06 radiation 40.0 14400 > th dose dependent rect. 8 1
160 96.06 radiation 40.0 1440 < th dose dependent rect. 22 8
162 96.07 temperature 15.0 270 > th dose independent rect. 1 18
163 96.07 wind 9.0 270 < th dose dependent rect. 6 19
166 96.09 precipitation 0.1 270 < th dose independent rect. 15 14
167 96.09 humidity 50.0 270 > th dose independent rect. 6 19
168 96.09 precipitation 0.1 270 < th dose dependent rect. 15 14
169 96.10 temperature 30.0 270 < th dose independent rect. 17 8
170 96.12 humidity 70.0 270 > th dose independent rect. 19 6
186 96.22 temperature 15.0 90 > th dose independent rect. 20 7
192 96.24 temperature 30.0 90 < th dose independent rect. 20 7
193 96.24 humidity 50.0 90 > th dose independent rect. 20 7
196 96.24 atmosphere 995.0 90 > th dose independent rect. 20 7
197 96.24 radiation 1.0 90 < th dose independent rect. 20 7
203 96.24 atmosphere 1015.0 90 < th dose independent rect. 3 17
204 96.24 radiation 1.0 90 < th dose dependent rect. 20 7
233 96.28 atmosphere 1015.0 270 < th dose independent rect. 19 6
248 96.31 atmosphere 1015.0 270 < th dose independent rect. 1 18
256 96.32 radiation 1.0 1440 > th dose dependent rect. 18 12
261 96.36 radiation 40.0 1440 > th dose dependent sin 13 NA
274 96.38 radiation 1.0 270 < th dose independent rect. 8 17
285 96.41 humidity 50.0 270 > th dose independent rect. 5 21
290 96.43 precipitation 0.1 270 < th dose independent rect. 1 18
291 96.43 precipitation 0.1 270 < th dose dependent rect. 1 18
296 96.46 precipitation 0.1 90 < th dose independent rect. 20 7
297 96.46 precipitation 0.1 90 < th dose dependent rect. 20 7
301 96.50 radiation 1.0 270 < th dose independent rect. 5 21
308 96.56 wind 9.0 270 < th dose independent rect. 15 14
310 96.56 radiation 1.0 1440 > th dose dependent rect. 4 2
328 96.61 humidity 90.0 720 < th dose dependent rect. 16 21
330 96.63 atmosphere 995.0 270 > th dose independent rect. 5 10
341 96.70 radiation 20.0 4320 > th dose dependent rect. 6 2
361 96.75 atmosphere 1015.0 90 < th dose independent rect. 21 6
367 96.78 humidity 70.0 720 > th dose independent rect. 15 19
374 96.82 wind 9.0 90 < th dose independent rect. 3 17
381 96.87 atmosphere 995.0 90 > th dose independent rect. 3 17
390 96.94 precipitation 0.1 90 < th dose independent rect. 3 17
391 96.94 humidity 60.0 10 > th dose dependent rect. 20 7
393 96.94 precipitation 0.1 90 < th dose dependent rect. 3 17
395 96.95 wind 9.0 270 < th dose independent rect. 1 18
422 97.12 atmosphere 995.0 270 > th dose independent rect. 1 18
425 97.15 wind 9.0 90 < th dose dependent rect. 20 7
428 97.18 radiation 30.0 14400 < th dose independent rect. 16 12
430 97.18 humidity 50.0 720 > th dose dependent rect. 14 20
459 97.33 humidity 70.0 270 > th dose independent rect. 15 10
467 97.35 radiation 10.0 1440 < th dose dependent rect. 18 12
538 97.58 radiation 30.0 14400 > th dose independent rect. 16 16
553 97.64 radiation 40.0 14400 < th dose independent rect. 8 1
560 97.66 radiation 30.0 14400 < th dose independent rect. 16 1
563 97.67 humidity 80.0 720 < th dose dependent rect. 17 2
604 97.74 humidity 80.0 720 < th dose dependent rect. 16 5
627 97.77 radiation 40.0 14400 > th dose independent rect. 15 18
629 97.78 humidity 80.0 720 < th dose dependent sin 12 NA
654 97.89 radiation 30.0 14400 > th dose independent rect. 16 1
682 97.92 humidity 50.0 4320 > th dose independent rect. 15 2
684 97.93 humidity 70.0 720 < th dose independent sin 11 NA
708 98.00 temperature 10.0 270 > th dose dependent rect. 1 5
714 98.02 humidity 70.0 720 > th dose independent sin 11 NA
715 98.02 wind 9.0 270 < th dose independent rect. 5 21
726 98.05 humidity 70.0 720 < th dose independent rect. 16 18
737 98.09 humidity 60.0 1440 < th dose dependent rect. 16 1
741 98.10 precipitation 0.1 10 < th dose independent rect. 3 17
744 98.10 precipitation 0.1 10 < th dose dependent rect. 3 17
746 98.10 humidity 60.0 1440 < th dose dependent rect. 16 18
755 98.12 temperature 10.0 270 > th dose dependent rect. 2 3
757 98.13 wind 9.0 14400 > th dose independent rect. 16 1
769 98.16 radiation 30.0 14400 < th dose independent rect. 15 17
806 98.23 temperature 10.0 90 > th dose dependent rect. 21 6
809 98.23 temperature 30.0 1440 > th dose dependent rect. 16 19
818 98.26 precipitation 0.1 270 < th dose independent rect. 2 3
820 98.26 precipitation 0.1 270 < th dose dependent rect. 2 3
826 98.27 temperature 10.0 270 > th dose dependent rect. 1 18
847 98.34 temperature 30.0 270 < th dose independent rect. 6 19
848 98.34 temperature 30.0 1440 > th dose dependent sin 10 NA
873 98.35 wind 9.0 270 < th dose independent rect. 6 19
882 98.37 precipitation 0.1 270 < th dose independent rect. 24 21
889 98.37 precipitation 0.1 270 < th dose dependent rect. 24 21
911 98.40 humidity 70.0 14400 < th dose independent rect. 18 13
940 98.43 humidity 50.0 4320 > th dose independent rect. 13 4
946 98.43 radiation 40.0 1440 > th dose independent rect. 14 19
953 98.45 wind 5.0 270 < th dose independent rect. 6 19
961 98.47 humidity 50.0 4320 < th dose independent rect. 15 2
962 98.47 precipitation 0.1 270 < th dose independent rect. 1 5
965 98.47 precipitation 0.1 270 < th dose dependent rect. 1 5
986 98.51 humidity 70.0 14400 < th dose independent rect. 18 4
995 98.51 temperature 30.0 720 > th dose independent rect. 17 17
996 98.51 temperature 30.0 1440 > th dose dependent rect. 16 1