Os07g0149900
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : X8 domain containing protein.
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Os07g0149900 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : X8 domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 135.72 | 0.547 | 6.34 | 0.887 | 0.656 | -1.29 | 0.533 | -0.697 | 0.346 | 20.5 | 20.7 | 620 | -- | -- |
| 137.02 | 0.545 | 6.32 | 1.03 | 0.646 | -1.23 | 0.27 | -- | 0.378 | 20.4 | 20.78 | 620 | -- | -- |
| 136.46 | 0.544 | 6.33 | 0.91 | 0.654 | -1.27 | -- | -0.502 | 0.354 | 20.3 | 20.78 | 611 | -- | -- |
| 137.23 | 0.546 | 6.32 | 1.02 | 0.652 | -1.22 | -- | -- | 0.383 | 20.4 | 20.82 | 635 | -- | -- |
| 156.39 | 0.582 | 6.31 | 0.959 | -- | -1.3 | -- | -0.52 | 0.365 | -- | 20.86 | 1378 | -- | -- |
| 184.27 | 0.636 | 6.38 | 0.579 | 0.453 | -- | 0.232 | -- | 0.088 | 20.4 | -- | -- | -- | -- |
| 184.42 | 0.636 | 6.38 | 0.573 | 0.454 | -- | -- | -- | 0.0885 | 20.2 | -- | -- | -- | -- |
| 152.65 | 0.575 | 6.29 | 0.983 | -- | -1.11 | -- | -- | 0.442 | -- | 22.06 | 1455 | -- | -- |
| 161.39 | 0.592 | 6.35 | -- | 0.605 | -0.899 | -- | -- | 0.234 | 20.5 | 21.2 | 634 | -- | -- |
| 195.82 | 0.654 | 6.37 | 0.57 | -- | -- | -- | -- | 0.0834 | -- | -- | -- | -- | -- |
| 193.07 | 0.65 | 6.39 | -- | 0.452 | -- | -- | -- | 0.0247 | 20.3 | -- | -- | -- | -- |
| 174.77 | 0.616 | 6.32 | -- | -- | -0.835 | -- | -- | 0.276 | -- | 22.32 | 1424 | -- | -- |
| 204.38 | 0.667 | 6.38 | -- | -- | -- | -- | -- | 0.0202 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 134.23 | wind | 9.0 | 43200 | > th | dose dependent | rect. | 18 | 13 |
| 4 | 136.34 | wind | 5.0 | 4320 | < th | dose independent | rect. | 20 | 1 |
| 5 | 136.61 | wind | 9.0 | 43200 | > th | dose dependent | rect. | 18 | 6 |
| 11 | 137.40 | wind | 5.0 | 4320 | > th | dose independent | rect. | 20 | 1 |
| 12 | 137.46 | wind | 9.0 | 43200 | > th | dose independent | rect. | 18 | 13 |
| 14 | 138.19 | wind | 9.0 | 43200 | > th | dose independent | rect. | 18 | 6 |
| 15 | 138.43 | wind | 9.0 | 43200 | > th | dose independent | rect. | 18 | 11 |
| 16 | 138.49 | temperature | 15.0 | 720 | > th | dose dependent | rect. | 17 | 16 |
| 17 | 138.51 | temperature | 25.0 | 720 | < th | dose dependent | rect. | 17 | 17 |
| 23 | 138.72 | wind | 3.0 | 4320 | > th | dose dependent | rect. | 20 | 1 |
| 24 | 138.73 | wind | 9.0 | 43200 | > th | dose independent | rect. | 18 | 9 |
| 47 | 139.21 | temperature | 15.0 | 720 | > th | dose dependent | sin | 11 | NA |
| 53 | 139.33 | wind | 5.0 | 4320 | > th | dose dependent | rect. | 19 | 8 |
| 60 | 139.41 | wind | 9.0 | 43200 | > th | dose dependent | rect. | 18 | 4 |
| 66 | 139.47 | temperature | 25.0 | 720 | < th | dose dependent | sin | 11 | NA |
| 83 | 139.70 | temperature | 25.0 | 720 | < th | dose dependent | rect. | 9 | 22 |
| 91 | 139.79 | temperature | 25.0 | 1440 | < th | dose dependent | rect. | 21 | 1 |
| 92 | 139.80 | wind | 9.0 | 43200 | < th | dose independent | rect. | 18 | 6 |
| 108 | 139.92 | wind | 9.0 | 43200 | < th | dose independent | rect. | 18 | 13 |
| 124 | 140.06 | temperature | 25.0 | 1440 | < th | dose dependent | rect. | 17 | 6 |
| 127 | 140.07 | wind | 9.0 | 43200 | < th | dose independent | rect. | 18 | 9 |
| 137 | 140.19 | temperature | 25.0 | 720 | < th | dose dependent | no | NA | NA |
| 155 | 140.36 | temperature | 25.0 | 720 | < th | dose dependent | rect. | 1 | 23 |
| 173 | 140.52 | temperature | 20.0 | 720 | > th | dose independent | rect. | 17 | 16 |
| 213 | 140.89 | temperature | 20.0 | 720 | > th | dose independent | rect. | 17 | 18 |
| 253 | 141.16 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 20 | 1 |
| 267 | 141.23 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 20 | 1 |
| 269 | 141.23 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 20 | 1 |
| 277 | 141.32 | temperature | 20.0 | 720 | > th | dose independent | sin | 12 | NA |
| 291 | 141.42 | temperature | 20.0 | 720 | > th | dose independent | rect. | 14 | 16 |
| 308 | 141.51 | wind | 9.0 | 43200 | > th | dose independent | rect. | 18 | 4 |
| 324 | 141.60 | temperature | 10.0 | 1440 | > th | dose dependent | rect. | 21 | 1 |
| 333 | 141.65 | temperature | 20.0 | 720 | > th | dose independent | rect. | 17 | 13 |
| 337 | 141.67 | wind | 9.0 | 43200 | < th | dose independent | rect. | 18 | 3 |
| 353 | 141.77 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 20 | 2 |
| 365 | 141.81 | temperature | 15.0 | 1440 | > th | dose dependent | rect. | 20 | 6 |
| 369 | 141.84 | temperature | 20.0 | 720 | > th | dose independent | rect. | 20 | 16 |
| 386 | 141.91 | temperature | 20.0 | 270 | < th | dose independent | rect. | 24 | 22 |
| 476 | 142.29 | temperature | 20.0 | 720 | > th | dose independent | rect. | 7 | 23 |
| 481 | 142.30 | temperature | 20.0 | 720 | > th | dose independent | rect. | 20 | 9 |
| 524 | 142.40 | temperature | 20.0 | 720 | < th | dose independent | rect. | 19 | 18 |
| 542 | 142.45 | temperature | 20.0 | 720 | < th | dose independent | rect. | 19 | 16 |
| 549 | 142.47 | temperature | 20.0 | 720 | > th | dose independent | rect. | 10 | 23 |
| 561 | 142.51 | wind | 7.0 | 43200 | > th | dose independent | rect. | 20 | 1 |
| 614 | 142.69 | temperature | 20.0 | 720 | < th | dose independent | rect. | 19 | 11 |
| 676 | 142.88 | temperature | 20.0 | 720 | > th | dose independent | rect. | 20 | 23 |
| 687 | 142.91 | temperature | 20.0 | 720 | > th | dose independent | no | NA | NA |
| 703 | 142.94 | temperature | 20.0 | 720 | > th | dose independent | rect. | 3 | 23 |
| 753 | 143.06 | temperature | 20.0 | 720 | > th | dose independent | rect. | 1 | 23 |
| 758 | 143.07 | temperature | 20.0 | 720 | > th | dose independent | rect. | 10 | 20 |
| 808 | 143.17 | temperature | 20.0 | 720 | > th | dose independent | rect. | 23 | 23 |
| 813 | 143.18 | temperature | 20.0 | 720 | < th | dose independent | rect. | 9 | 21 |
| 825 | 143.21 | wind | 7.0 | 43200 | < th | dose independent | rect. | 20 | 1 |
| 829 | 143.21 | temperature | 25.0 | 1440 | < th | dose dependent | rect. | 1 | 1 |
| 931 | 143.45 | temperature | 20.0 | 720 | < th | dose independent | sin | 11 | NA |
| 941 | 143.47 | temperature | 15.0 | 1440 | > th | dose dependent | rect. | 1 | 1 |