Os07g0148600
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Sulfotransferase family protein.
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Os07g0148600 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Sulfotransferase family protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = radiation,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 235.35 | 0.721 | 3.23 | -0.449 | 0.362 | -0.38 | -0.477 | 3.11 | -0.276 | 11 | 7.776 | 4330 | -- | -- |
| 244.64 | 0.728 | 3.22 | -0.0649 | 0.4 | -0.294 | -0.46 | -- | -0.141 | 10.6 | 60 | 5158 | -- | -- |
| 235.72 | 0.715 | 3.23 | -0.45 | 0.362 | -0.38 | -- | 3.07 | -0.276 | 11 | 6.865 | 4376 | -- | -- |
| 245.57 | 0.73 | 3.23 | -0.0677 | 0.409 | -0.322 | -- | -- | -0.154 | 10.6 | 159.5 | 5182 | -- | -- |
| 241.57 | 0.724 | 3.26 | -0.602 | -- | -0.497 | -- | 3.6 | -0.332 | -- | 6.44 | 4457 | -- | -- |
| 246.41 | 0.736 | 3.22 | -0.0891 | 0.37 | -- | -0.484 | -- | -0.127 | 11.1 | -- | -- | -- | -- |
| 247.4 | 0.737 | 3.22 | -0.109 | 0.373 | -- | -- | -- | -0.128 | 11.2 | -- | -- | -- | -- |
| 247.43 | 0.736 | 3.23 | -0.11 | -- | -0.293 | -- | -- | -0.139 | -- | 6.44 | 4457 | -- | -- |
| 245.7 | 0.73 | 3.23 | -- | 0.41 | -0.328 | -- | -- | -0.168 | 10.6 | 629.8 | 5170 | -- | -- |
| 256.06 | 0.748 | 3.23 | -0.117 | -- | -- | -- | -- | -0.131 | -- | -- | -- | -- | -- |
| 247.71 | 0.736 | 3.22 | -- | 0.374 | -- | -- | -- | -0.116 | 11.2 | -- | -- | -- | -- |
| 247.75 | 0.735 | 3.23 | -- | -- | -0.293 | -- | -- | -0.127 | -- | 6.44 | 4457 | -- | -- |
| 256.43 | 0.747 | 3.23 | -- | -- | -- | -- | -- | -0.118 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 220.78 | radiation | 1 | 90 | < th | dose independent | rect. | 8 | 4 |
| 2 | 220.78 | radiation | 1 | 90 | < th | dose dependent | rect. | 8 | 4 |
| 5 | 222.66 | radiation | 1 | 270 | < th | dose independent | rect. | 9 | 1 |
| 6 | 222.66 | radiation | 1 | 270 | < th | dose dependent | rect. | 9 | 1 |
| 19 | 229.90 | radiation | 20 | 90 | > th | dose independent | rect. | 6 | 1 |
| 33 | 229.90 | radiation | 20 | 90 | > th | dose dependent | rect. | 6 | 1 |
| 47 | 230.43 | radiation | 30 | 10 | > th | dose dependent | rect. | 15 | 18 |
| 48 | 230.71 | humidity | 70 | 10 | < th | dose dependent | rect. | 16 | 17 |
| 51 | 231.12 | radiation | 30 | 10 | > th | dose dependent | rect. | 8 | 1 |
| 53 | 231.14 | humidity | 70 | 10 | < th | dose independent | rect. | 16 | 17 |
| 71 | 231.23 | humidity | 70 | 10 | < th | dose dependent | rect. | 18 | 14 |
| 90 | 231.31 | humidity | 70 | 10 | < th | dose independent | rect. | 18 | 14 |
| 97 | 231.37 | humidity | 80 | 90 | < th | dose independent | rect. | 3 | 4 |
| 98 | 231.38 | humidity | 80 | 90 | < th | dose independent | rect. | 6 | 1 |
| 136 | 231.49 | humidity | 80 | 90 | < th | dose dependent | rect. | 6 | 1 |
| 137 | 231.51 | humidity | 80 | 90 | < th | dose dependent | rect. | 1 | 6 |
| 142 | 231.53 | humidity | 70 | 10 | < th | dose independent | rect. | 7 | 1 |
| 202 | 231.53 | humidity | 70 | 10 | < th | dose dependent | rect. | 7 | 1 |
| 450 | 232.29 | humidity | 90 | 4320 | < th | dose independent | rect. | 5 | 1 |
| 562 | 233.42 | humidity | 90 | 4320 | < th | dose independent | rect. | 2 | 4 |
| 567 | 233.58 | humidity | 90 | 720 | < th | dose dependent | rect. | 24 | 2 |
| 570 | 233.71 | humidity | 90 | 720 | < th | dose independent | rect. | 1 | 3 |
| 588 | 233.93 | radiation | 10 | 4320 | > th | dose dependent | rect. | 14 | 2 |
| 592 | 234.07 | humidity | 90 | 720 | < th | dose independent | rect. | 24 | 7 |
| 593 | 234.08 | radiation | 20 | 10 | < th | dose independent | rect. | 12 | 1 |
| 597 | 234.12 | radiation | 40 | 4320 | < th | dose dependent | rect. | 14 | 2 |
| 610 | 234.32 | humidity | 90 | 720 | < th | dose dependent | rect. | 24 | 7 |
| 612 | 234.34 | humidity | 90 | 4320 | > th | dose independent | rect. | 5 | 1 |
| 613 | 234.36 | humidity | 90 | 720 | < th | dose dependent | rect. | 23 | 9 |
| 620 | 234.46 | wind | 9 | 43200 | > th | dose independent | rect. | 5 | 2 |
| 635 | 234.51 | humidity | 90 | 720 | < th | dose dependent | rect. | 24 | 5 |
| 638 | 234.55 | radiation | 30 | 4320 | < th | dose independent | rect. | 14 | 2 |
| 641 | 234.61 | temperature | 20 | 1440 | < th | dose independent | rect. | 16 | 2 |
| 683 | 234.76 | wind | 9 | 43200 | > th | dose dependent | rect. | 5 | 2 |
| 702 | 234.82 | humidity | 90 | 4320 | > th | dose independent | rect. | 1 | 5 |
| 716 | 234.89 | temperature | 20 | 1440 | > th | dose independent | rect. | 16 | 2 |
| 720 | 234.92 | radiation | 30 | 4320 | > th | dose independent | rect. | 14 | 1 |
| 725 | 234.93 | radiation | 40 | 4320 | < th | dose dependent | rect. | 14 | 16 |
| 727 | 234.95 | wind | 9 | 43200 | > th | dose independent | rect. | 3 | 5 |
| 746 | 235.05 | wind | 9 | 43200 | < th | dose independent | rect. | 3 | 5 |
| 757 | 235.06 | radiation | 30 | 4320 | < th | dose independent | rect. | 14 | 15 |
| 759 | 235.06 | temperature | 20 | 720 | < th | dose dependent | rect. | 6 | 2 |
| 768 | 235.07 | radiation | 30 | 4320 | < th | dose independent | rect. | 14 | 9 |
| 770 | 235.07 | radiation | 30 | 4320 | < th | dose independent | rect. | 14 | 13 |
| 901 | 235.30 | atmosphere | 1005 | 10 | > th | dose dependent | rect. | 7 | 1 |
| 905 | 235.31 | humidity | 70 | 4320 | > th | dose independent | rect. | 23 | 8 |
| 907 | 235.32 | wind | 1 | 4320 | < th | dose independent | rect. | 14 | 1 |
| 922 | 235.35 | radiation | 30 | 10 | < th | dose independent | sin | 11 | NA |
| 928 | 235.37 | wind | 9 | 43200 | > th | dose dependent | rect. | 3 | 5 |
| 931 | 235.39 | radiation | 1 | 10 | < th | dose independent | rect. | 7 | 5 |
| 933 | 235.39 | radiation | 1 | 10 | < th | dose dependent | rect. | 7 | 5 |
| 959 | 235.45 | temperature | 20 | 1440 | < th | dose independent | rect. | 9 | 9 |
| 967 | 235.46 | wind | 9 | 43200 | > th | dose independent | rect. | 24 | 8 |
| 990 | 235.51 | humidity | 50 | 4320 | > th | dose dependent | rect. | 3 | 5 |
| 992 | 235.52 | temperature | 30 | 30 | > th | dose independent | rect. | 18 | 19 |
| 999 | 235.55 | temperature | 20 | 1440 | > th | dose independent | rect. | 9 | 9 |