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Notice!
This gene did NOT pass the analysis criteria (log2(expression) > 5 in more than 80% of samples & normality of residuals was not rejected).
The modeling results may be unreliable.

Os07g0148200

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Similar to Flavonol 3-O-glucosyltransferase (EC 2.4.1.91) (UDP-glucose flavonoid 3-O-glucosyltransferase) (Bronze-1) (Bz-McC allele).


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 3.44 (0.0385) R2 : 0.155
β1 : -- (--) R2dD : -- R2D : --
β2 : 0.917 (0.101) R2dC : 0.154 R2C : 0.153
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.0611 (0.0811) R2dN8 : 0.00136 R2N8 : 0.000996
σ : 0.726
deviance : 241.15
__
_____
C
peak time of C : 6.05
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = temperature, response mode = > th, dose dependency = dose dependent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
219.47 0.696 3.7 -2.63 0.925 1.8 0.355 -11.8 -0.0585 6.26 28.99 1310 -- --
231.01 0.708 3.47 -0.405 0.884 0.597 0.304 -- -0.0889 6.33 18.6 1241 -- --
219.68 0.69 3.71 -2.67 0.925 1.8 -- -11.7 -0.0979 6.34 28.82 1312 -- --
229.1 0.705 3.48 -0.365 0.961 0.449 -- -- -0.0721 6.39 32.89 7624 -- --
263.85 0.757 3.69 -2.39 -- 1.65 -- -9.94 -0.0795 -- 28.6 1312 -- --
239.73 0.726 3.44 -0.189 0.916 -- 0.48 -- 0.0421 5.93 -- -- -- --
240.25 0.726 3.44 -0.184 0.919 -- -- -- 0.0406 6.04 -- -- -- --
269.56 0.765 3.43 -0.341 -- 0.529 -- -- 0.19 -- 30.34 1197 -- --
230.66 0.707 3.47 -- 0.945 0.431 -- -- -0.0678 5.97 33 7599 -- --
284.06 0.788 3.46 -0.158 -- -- -- -- 0.0614 -- -- -- -- --
241.15 0.726 3.44 -- 0.917 -- -- -- 0.0611 6.05 -- -- -- --
271.24 0.767 3.43 -- -- 0.515 -- -- 0.183 -- 31.83 1154 -- --
284.72 0.788 3.46 -- -- -- -- -- 0.0789 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 206.59 humidity 80.0 10 > th dose dependent rect. 4 2
2 207.18 humidity 90.0 90 > th dose independent rect. 3 4
3 207.27 humidity 90.0 10 > th dose independent rect. 4 2
5 207.91 humidity 70.0 720 > th dose independent rect. 19 8
8 208.25 humidity 80.0 90 > th dose dependent rect. 3 3
21 209.42 humidity 70.0 90 > th dose dependent rect. 3 6
22 209.48 wind 3.0 10 < th dose independent rect. 4 2
23 209.51 wind 5.0 10 < th dose dependent rect. 4 2
24 209.67 humidity 90.0 270 > th dose independent rect. 1 4
32 210.27 humidity 70.0 720 < th dose independent rect. 19 12
33 210.33 humidity 70.0 720 < th dose independent rect. 19 1
48 210.56 humidity 70.0 720 < th dose dependent rect. 19 12
50 210.59 humidity 70.0 720 < th dose dependent rect. 19 1
64 210.98 temperature 10.0 10 > th dose dependent rect. 4 2
73 211.18 humidity 80.0 270 > th dose dependent rect. 1 5
78 211.27 wind 3.0 90 < th dose dependent rect. 3 6
90 211.30 radiation 10.0 10 < th dose independent rect. 4 2
111 211.65 humidity 60.0 10 > th dose dependent rect. 4 7
122 211.69 humidity 90.0 10 > th dose independent rect. 4 8
124 211.71 temperature 15.0 10 > th dose independent rect. 6 22
127 211.78 wind 9.0 10 < th dose independent rect. 6 22
133 211.91 wind 9.0 10 < th dose independent rect. 4 2
134 211.91 temperature 10.0 10 > th dose independent rect. 4 2
136 211.91 temperature 30.0 10 < th dose independent rect. 4 2
137 211.91 humidity 50.0 10 > th dose independent rect. 4 2
140 211.91 atmosphere 995.0 10 > th dose independent rect. 4 2
141 211.91 atmosphere 1010.0 10 < th dose independent rect. 4 2
146 211.91 humidity 90.0 90 > th dose independent rect. 3 9
152 212.03 precipitation 0.1 10 < th dose independent rect. 4 2
153 212.03 precipitation 0.1 10 < th dose dependent rect. 4 2
154 212.04 humidity 90.0 90 > th dose independent rect. 3 6
169 212.31 atmosphere 1015.0 90 < th dose dependent rect. 4 1
170 212.32 atmosphere 1015.0 10 < th dose dependent rect. 4 2
175 212.37 radiation 40.0 10 < th dose dependent rect. 4 2
179 212.47 atmosphere 1010.0 10 < th dose independent rect. 4 5
180 212.49 temperature 25.0 90 < th dose independent rect. 4 1
183 212.50 humidity 90.0 10 > th dose independent rect. 4 6
185 212.50 radiation 40.0 10 < th dose dependent rect. 4 7
204 212.77 wind 3.0 90 < th dose dependent rect. 3 8
212 212.95 temperature 15.0 90 > th dose dependent rect. 3 3
213 212.96 wind 3.0 90 < th dose dependent rect. 3 11
214 212.97 temperature 15.0 90 > th dose dependent rect. 4 1
218 213.01 humidity 90.0 90 > th dose dependent rect. 3 14
246 213.55 humidity 90.0 10 > th dose dependent rect. 4 8
255 213.63 temperature 30.0 720 > th dose dependent rect. 18 1
271 213.65 radiation 1.0 90 < th dose dependent rect. 4 1
274 213.67 radiation 1.0 90 < th dose independent rect. 4 1
278 213.68 atmosphere 1015.0 10 < th dose independent rect. 6 22
282 213.74 wind 9.0 90 < th dose independent rect. 5 23
293 213.85 wind 9.0 90 < th dose independent rect. 4 1
294 213.85 temperature 10.0 90 > th dose independent rect. 4 1
297 213.85 humidity 50.0 90 > th dose independent rect. 4 1
300 213.85 atmosphere 995.0 90 > th dose independent rect. 4 1
301 213.85 atmosphere 1010.0 90 < th dose independent rect. 4 1
312 213.88 precipitation 0.1 90 < th dose independent rect. 4 1
313 213.88 precipitation 0.1 90 < th dose dependent rect. 4 1
315 213.89 radiation 30.0 10 < th dose independent rect. 4 7
328 214.07 humidity 90.0 90 > th dose independent rect. 3 14
358 214.29 precipitation 0.1 10 < th dose independent rect. 6 22
359 214.29 precipitation 0.1 10 < th dose dependent rect. 6 22
423 214.70 humidity 90.0 90 > th dose dependent rect. 3 18
460 214.93 wind 3.0 90 < th dose dependent rect. 3 16
519 215.23 temperature 30.0 720 > th dose independent rect. 18 1
573 215.43 atmosphere 995.0 10 > th dose independent rect. 6 22
574 215.44 atmosphere 1000.0 90 > th dose independent rect. 3 6
575 215.44 atmosphere 995.0 10 > th dose dependent rect. 4 2
579 215.47 humidity 60.0 1440 > th dose independent rect. 18 2
580 215.47 wind 3.0 90 < th dose independent rect. 3 6
581 215.47 wind 1.0 90 < th dose independent rect. 4 10
588 215.51 humidity 70.0 10 > th dose independent rect. 4 6
589 215.51 humidity 60.0 1440 > th dose independent rect. 18 6
593 215.54 temperature 15.0 10 > th dose independent rect. 20 8
616 215.61 radiation 30.0 90 < th dose independent rect. 3 6
621 215.62 humidity 60.0 1440 > th dose independent rect. 18 4
634 215.65 temperature 15.0 10 > th dose independent rect. 9 19
662 215.74 wind 1.0 90 < th dose independent rect. 4 14
667 215.77 atmosphere 1010.0 10 < th dose independent rect. 20 8
669 215.79 temperature 30.0 1440 < th dose independent rect. 18 14
673 215.81 temperature 30.0 1440 < th dose independent rect. 18 11
709 215.92 temperature 15.0 90 > th dose independent rect. 19 8
756 216.09 humidity 60.0 1440 > th dose independent rect. 18 14
762 216.11 atmosphere 1010.0 10 < th dose independent rect. 4 16
820 216.35 temperature 30.0 90 < th dose dependent rect. 4 1
823 216.36 atmosphere 1010.0 90 < th dose independent rect. 19 8
838 216.41 wind 9.0 90 < th dose independent rect. 9 18
849 216.45 humidity 90.0 90 < th dose independent rect. 1 13
865 216.46 humidity 60.0 90 > th dose independent rect. 3 6
931 216.70 temperature 30.0 90 < th dose independent rect. 3 6
932 216.70 precipitation 0.1 90 < th dose independent rect. 3 6
934 216.70 temperature 10.0 90 > th dose dependent rect. 3 6
935 216.70 precipitation 0.1 90 < th dose dependent rect. 3 6
939 216.73 wind 9.0 90 < th dose independent rect. 3 6
940 216.73 temperature 10.0 90 > th dose independent rect. 3 6
945 216.73 temperature 10.0 90 > th dose independent rect. 9 18
966 216.83 temperature 30.0 1440 < th dose independent rect. 18 7
998 216.98 temperature 15.0 90 > th dose independent rect. 3 16
1000 216.99 wind 3.0 10 < th dose independent rect. 4 5