Os07g0147700
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : ATPase, BadF/BadG/BcrA/BcrD type domain containing protein.
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Os07g0147700 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : ATPase, BadF/BadG/BcrA/BcrD type domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 184.58 | 0.638 | 3.71 | 1.88 | 1.26 | -2.12 | -0.785 | 1.16 | 1.1 | 10.4 | 16.34 | 11863 | -- | -- |
| 184.47 | 0.633 | 3.71 | 2.03 | 1.27 | -2.48 | -0.743 | -- | 1.24 | 10.3 | 10.75 | 15654 | -- | -- |
| 187.06 | 0.637 | 3.71 | 1.86 | 1.26 | -2.12 | -- | 1.22 | 1.11 | 10.3 | 16.39 | 11817 | -- | -- |
| 186.93 | 0.637 | 3.71 | 2.01 | 1.23 | -2.52 | -- | -- | 1.25 | 10.2 | 11.3 | 15407 | -- | -- |
| 278.22 | 0.777 | 3.68 | 2.05 | -- | -2.11 | -- | 1.26 | 1.31 | -- | 17.16 | 15285 | -- | -- |
| 277.88 | 0.781 | 3.95 | 0.124 | 1.29 | -- | -0.685 | -- | 0.192 | 10.4 | -- | -- | -- | -- |
| 279.79 | 0.783 | 3.95 | 0.096 | 1.29 | -- | -- | -- | 0.189 | 10.4 | -- | -- | -- | -- |
| 277.15 | 0.775 | 3.74 | 2.04 | -- | -2.64 | -- | -- | 1.27 | -- | 3.6 | 15258 | -- | -- |
| 222.36 | 0.695 | 3.9 | -- | 1.19 | -1.55 | -- | -- | 0.427 | 9.99 | -2.468 | 2640 | -- | -- |
| 382.03 | 0.913 | 3.99 | 0.0745 | -- | -- | -- | -- | 0.185 | -- | -- | -- | -- | -- |
| 280.04 | 0.783 | 3.95 | -- | 1.29 | -- | -- | -- | 0.179 | 10.4 | -- | -- | -- | -- |
| 296.15 | 0.802 | 3.92 | -- | -- | -1.91 | -- | -- | 0.484 | -- | 2.709 | 2288 | -- | -- |
| 382.17 | 0.912 | 3.99 | -- | -- | -- | -- | -- | 0.177 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 181.54 | temperature | 30 | 14400 | < th | dose dependent | rect. | 22 | 1 |
| 2 | 181.55 | temperature | 10 | 14400 | > th | dose dependent | rect. | 22 | 1 |
| 107 | 182.88 | temperature | 10 | 14400 | > th | dose dependent | sin | 12 | NA |
| 122 | 182.93 | temperature | 30 | 14400 | < th | dose dependent | sin | 12 | NA |
| 620 | 184.10 | temperature | 30 | 14400 | < th | dose dependent | rect. | 3 | 1 |
| 656 | 184.15 | temperature | 10 | 14400 | > th | dose dependent | no | NA | NA |
| 702 | 184.21 | temperature | 10 | 14400 | > th | dose dependent | rect. | 3 | 1 |
| 727 | 184.23 | temperature | 10 | 14400 | > th | dose dependent | rect. | 5 | 23 |
| 748 | 184.27 | temperature | 30 | 14400 | < th | dose dependent | no | NA | NA |
| 752 | 184.27 | temperature | 10 | 14400 | > th | dose dependent | rect. | 1 | 23 |
| 823 | 184.35 | temperature | 30 | 14400 | < th | dose dependent | rect. | 5 | 23 |
| 849 | 184.40 | temperature | 30 | 14400 | < th | dose dependent | rect. | 1 | 23 |