Os07g0143000
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Aldo/keto reductase family protein.
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Os07g0143000 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Aldo/keto reductase family protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = humidity,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 62.21 | 0.371 | 14.2 | -0.594 | 0.885 | -1.21 | 0.459 | 0.423 | -0.426 | 11.9 | 79 | 1406 | -- | -- |
| 62.35 | 0.368 | 14.2 | -0.56 | 0.888 | -1.18 | 0.457 | -- | -0.419 | 11.9 | 78.72 | 1405 | -- | -- |
| 63.12 | 0.37 | 14.2 | -0.579 | 0.881 | -1.2 | -- | 0.446 | -0.426 | 11.9 | 79 | 1405 | -- | -- |
| 63.26 | 0.37 | 14.2 | -0.541 | 0.886 | -1.17 | -- | -- | -0.416 | 11.9 | 78.81 | 1405 | -- | -- |
| 90.54 | 0.446 | 14.2 | -0.564 | -- | -0.58 | -- | 0.0114 | -0.353 | -- | 79 | 1405 | -- | -- |
| 79.01 | 0.417 | 14.1 | -0.503 | 0.878 | -- | 0.358 | -- | -0.365 | 11.7 | -- | -- | -- | -- |
| 79.56 | 0.418 | 14.1 | -0.488 | 0.877 | -- | -- | -- | -0.363 | 11.7 | -- | -- | -- | -- |
| 90.54 | 0.445 | 14.2 | -0.564 | -- | -0.58 | -- | -- | -0.353 | -- | 78.81 | 1405 | -- | -- |
| 70.29 | 0.39 | 14.1 | -- | 0.879 | -1.11 | -- | -- | -0.381 | 11.9 | 80 | 1422 | -- | -- |
| 127.93 | 0.529 | 14.2 | -0.513 | -- | -- | -- | -- | -0.374 | -- | -- | -- | -- | -- |
| 85.84 | 0.433 | 14.1 | -- | 0.883 | -- | -- | -- | -0.309 | 11.8 | -- | -- | -- | -- |
| 98.91 | 0.465 | 14.1 | -- | -- | -0.568 | -- | -- | -0.291 | -- | 78.81 | 1405 | -- | -- |
| 134.88 | 0.542 | 14.1 | -- | -- | -- | -- | -- | -0.317 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 54.83 | humidity | 80 | 1440 | < th | dose independent | rect. | 8 | 7 |
| 3 | 55.36 | humidity | 80 | 1440 | > th | dose independent | rect. | 8 | 7 |
| 5 | 55.60 | humidity | 80 | 1440 | > th | dose independent | rect. | 7 | 9 |
| 28 | 56.52 | humidity | 80 | 1440 | > th | dose independent | sin | 1 | NA |
| 40 | 56.76 | humidity | 80 | 1440 | > th | dose independent | rect. | 11 | 3 |
| 42 | 56.77 | humidity | 80 | 1440 | < th | dose independent | sin | 1 | NA |
| 74 | 57.33 | humidity | 80 | 1440 | < th | dose independent | rect. | 11 | 3 |
| 186 | 59.25 | radiation | 1 | 1440 | < th | dose dependent | rect. | 7 | 10 |
| 190 | 59.36 | humidity | 70 | 1440 | > th | dose dependent | rect. | 11 | 2 |
| 230 | 60.26 | radiation | 1 | 1440 | < th | dose dependent | rect. | 9 | 8 |
| 236 | 60.30 | humidity | 70 | 1440 | > th | dose dependent | rect. | 8 | 7 |
| 241 | 60.39 | humidity | 70 | 1440 | > th | dose dependent | rect. | 8 | 11 |
| 244 | 60.42 | humidity | 90 | 720 | > th | dose dependent | rect. | 20 | 1 |
| 247 | 60.46 | radiation | 1 | 1440 | < th | dose dependent | rect. | 11 | 6 |
| 251 | 60.48 | radiation | 1 | 1440 | < th | dose independent | rect. | 11 | 1 |
| 253 | 60.48 | radiation | 1 | 1440 | < th | dose dependent | rect. | 11 | 1 |
| 278 | 60.82 | humidity | 70 | 1440 | > th | dose dependent | sin | 0 | NA |
| 294 | 60.99 | radiation | 1 | 1440 | > th | dose independent | rect. | 9 | 4 |
| 299 | 61.01 | radiation | 1 | 1440 | > th | dose independent | rect. | 9 | 6 |
| 348 | 61.36 | radiation | 1 | 1440 | > th | dose independent | rect. | 11 | 4 |
| 402 | 61.61 | radiation | 10 | 1440 | < th | dose dependent | rect. | 9 | 11 |
| 403 | 61.61 | radiation | 10 | 1440 | < th | dose dependent | rect. | 9 | 13 |
| 409 | 61.62 | radiation | 10 | 1440 | < th | dose dependent | rect. | 9 | 15 |
| 410 | 61.62 | radiation | 10 | 1440 | < th | dose dependent | rect. | 12 | 15 |
| 412 | 61.63 | radiation | 10 | 1440 | < th | dose dependent | sin | 19 | NA |
| 428 | 61.68 | radiation | 1 | 1440 | > th | dose independent | rect. | 11 | 1 |
| 429 | 61.68 | radiation | 1 | 1440 | < th | dose independent | rect. | 8 | 7 |
| 518 | 61.94 | humidity | 90 | 720 | > th | dose dependent | rect. | 7 | 18 |
| 519 | 61.95 | radiation | 1 | 1440 | < th | dose independent | rect. | 9 | 4 |
| 522 | 61.95 | radiation | 1 | 1440 | < th | dose dependent | rect. | 9 | 4 |
| 524 | 61.97 | radiation | 1 | 1440 | < th | dose independent | rect. | 11 | 4 |
| 597 | 62.28 | humidity | 90 | 720 | > th | dose dependent | rect. | 7 | 16 |
| 737 | 62.60 | humidity | 80 | 1440 | > th | dose independent | no | NA | NA |
| 804 | 62.80 | humidity | 80 | 1440 | < th | dose independent | no | NA | NA |
| 832 | 62.87 | humidity | 80 | 1440 | > th | dose independent | rect. | 17 | 23 |
| 850 | 62.93 | humidity | 80 | 1440 | > th | dose independent | rect. | 11 | 23 |
| 866 | 62.98 | radiation | 1 | 1440 | > th | dose independent | rect. | 7 | 9 |
| 895 | 63.04 | humidity | 80 | 1440 | > th | dose independent | rect. | 15 | 23 |
| 901 | 63.05 | humidity | 80 | 1440 | < th | dose independent | rect. | 16 | 23 |
| 921 | 63.11 | radiation | 1 | 1440 | < th | dose independent | rect. | 7 | 9 |
| 967 | 63.23 | humidity | 90 | 1440 | < th | dose dependent | rect. | 8 | 8 |
| 993 | 63.28 | humidity | 90 | 1440 | < th | dose dependent | rect. | 5 | 11 |