Os07g0141500
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Zinc finger, SWIM-type domain containing protein.
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Os07g0141500 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Zinc finger, SWIM-type domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 146.59 | 0.569 | 6.22 | -0.21 | 0.74 | -2.77 | -0.653 | -0.183 | -0.567 | 3 | 30.99 | 101 | -- | -- |
| 146.57 | 0.564 | 6.22 | -0.238 | 0.738 | -2.8 | -0.715 | -- | -0.575 | 3.07 | 31.05 | 107 | -- | -- |
| 147.66 | 0.566 | 6.21 | -0.118 | 0.776 | -2.82 | -- | -0.648 | -0.55 | 2.94 | 31.11 | 102 | -- | -- |
| 148.23 | 0.567 | 6.22 | -0.23 | 0.743 | -2.82 | -- | -- | -0.567 | 2.99 | 31.27 | 104 | -- | -- |
| 162.09 | 0.593 | 6.2 | 0.046 | -- | -2.31 | -- | -0.994 | -0.518 | -- | 25.79 | 231 | -- | -- |
| 241.81 | 0.729 | 6.12 | 0.42 | 0.15 | -- | 1.27 | -- | -0.0848 | 16.1 | -- | -- | -- | -- |
| 246.41 | 0.735 | 6.11 | 0.434 | 0.157 | -- | -- | -- | -0.0777 | 15.9 | -- | -- | -- | -- |
| 164.2 | 0.597 | 6.22 | -0.133 | -- | -2.24 | -- | -- | -0.558 | -- | 25.96 | 232 | -- | -- |
| 149.49 | 0.569 | 6.21 | -- | 0.707 | -2.72 | -- | -- | -0.525 | 2.94 | 31.33 | 100 | -- | -- |
| 247.76 | 0.736 | 6.11 | 0.428 | -- | -- | -- | -- | -0.0819 | -- | -- | -- | -- | -- |
| 251.37 | 0.742 | 6.12 | -- | 0.149 | -- | -- | -- | -0.126 | 16 | -- | -- | -- | -- |
| 164.62 | 0.598 | 6.21 | -- | -- | -2.18 | -- | -- | -0.532 | -- | 25.99 | 231 | -- | -- |
| 252.59 | 0.742 | 6.12 | -- | -- | -- | -- | -- | -0.129 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 142.85 | temperature | 15 | 90 | > th | dose dependent | rect. | 6 | 23 |
| 2 | 146.97 | temperature | 30 | 90 | < th | dose dependent | rect. | 9 | 23 |
| 3 | 146.99 | temperature | 30 | 90 | < th | dose dependent | rect. | 19 | 23 |
| 4 | 147.34 | temperature | 30 | 90 | < th | dose dependent | no | NA | NA |
| 5 | 147.94 | temperature | 30 | 90 | < th | dose dependent | rect. | 15 | 23 |
| 6 | 148.02 | temperature | 30 | 90 | < th | dose dependent | rect. | 13 | 23 |
| 7 | 148.29 | temperature | 10 | 90 | > th | dose dependent | no | NA | NA |
| 9 | 148.52 | temperature | 30 | 90 | < th | dose dependent | rect. | 23 | 23 |
| 10 | 148.95 | temperature | 30 | 90 | < th | dose dependent | rect. | 3 | 23 |
| 11 | 148.99 | temperature | 15 | 270 | > th | dose dependent | rect. | 17 | 23 |
| 16 | 149.35 | temperature | 30 | 270 | < th | dose dependent | rect. | 21 | 23 |
| 18 | 149.47 | temperature | 10 | 270 | > th | dose dependent | rect. | 4 | 23 |
| 19 | 149.54 | temperature | 15 | 270 | > th | dose dependent | rect. | 15 | 23 |
| 49 | 151.32 | temperature | 20 | 10 | > th | dose dependent | rect. | 7 | 22 |
| 69 | 153.07 | temperature | 30 | 10 | < th | dose dependent | rect. | 1 | 23 |
| 165 | 157.76 | temperature | 15 | 90 | > th | dose dependent | rect. | 21 | 23 |
| 172 | 158.01 | temperature | 10 | 270 | > th | dose dependent | sin | 8 | NA |
| 193 | 158.64 | temperature | 15 | 10 | > th | dose dependent | rect. | 23 | 23 |
| 196 | 158.73 | temperature | 15 | 90 | > th | dose dependent | rect. | 1 | 23 |
| 211 | 159.52 | temperature | 30 | 270 | < th | dose dependent | sin | 8 | NA |
| 231 | 160.19 | temperature | 15 | 10 | > th | dose dependent | rect. | 21 | 23 |
| 286 | 161.53 | temperature | 30 | 30 | < th | dose dependent | rect. | 5 | 23 |
| 301 | 162.18 | temperature | 20 | 10 | > th | dose dependent | rect. | 17 | 23 |
| 311 | 162.47 | temperature | 20 | 1440 | > th | dose dependent | rect. | 24 | 1 |
| 313 | 162.50 | temperature | 20 | 10 | > th | dose dependent | rect. | 1 | 23 |
| 338 | 163.08 | temperature | 15 | 1440 | > th | dose dependent | rect. | 23 | 6 |
| 339 | 163.10 | temperature | 15 | 1440 | > th | dose dependent | rect. | 23 | 3 |
| 354 | 163.31 | temperature | 30 | 1440 | < th | dose dependent | rect. | 23 | 7 |
| 379 | 163.53 | temperature | 25 | 1440 | < th | dose dependent | rect. | 21 | 15 |
| 398 | 163.67 | temperature | 30 | 1440 | < th | dose dependent | rect. | 23 | 3 |
| 414 | 163.76 | temperature | 25 | 1440 | < th | dose dependent | rect. | 1 | 10 |
| 450 | 163.93 | temperature | 30 | 1440 | < th | dose dependent | rect. | 1 | 1 |
| 466 | 163.99 | temperature | 25 | 1440 | < th | dose dependent | sin | 8 | NA |
| 491 | 164.11 | temperature | 10 | 1440 | > th | dose dependent | rect. | 3 | 2 |
| 539 | 164.32 | temperature | 30 | 1440 | < th | dose dependent | rect. | 3 | 2 |
| 570 | 164.46 | temperature | 25 | 1440 | < th | dose dependent | rect. | 3 | 5 |
| 645 | 164.78 | temperature | 20 | 10 | > th | dose dependent | rect. | 15 | 23 |
| 797 | 165.53 | temperature | 10 | 1440 | > th | dose dependent | sin | 9 | NA |