Os07g0139600
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Ribosomal protein L41 family protein.
FiT-DB / Search/ Help/ Sample detail
|
Os07g0139600 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
|
Description : Ribosomal protein L41 family protein.
|
|
log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
|
_____ |
|
__
Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 79.67 | 0.419 | 13.7 | -0.7 | 0.971 | 0.869 | 0.442 | -1.67 | -0.107 | 17.6 | 19.7 | 2731 | -- | -- |
| 83.13 | 0.425 | 13.7 | -0.456 | 0.97 | 1.25 | 0.578 | -- | -0.0319 | 17.7 | 19.1 | 2819 | -- | -- |
| 80.14 | 0.417 | 13.7 | -0.713 | 0.972 | 0.872 | -- | -1.71 | -0.107 | 17.6 | 19.7 | 2735 | -- | -- |
| 83.61 | 0.426 | 13.7 | -0.476 | 0.98 | 1.33 | -- | -- | -0.0404 | 17.5 | 18.92 | 2757 | -- | -- |
| 127.44 | 0.526 | 13.7 | -0.671 | -- | 0.896 | -- | -1.41 | -0.129 | -- | 20.71 | 2021 | -- | -- |
| 109.99 | 0.492 | 13.6 | 0.173 | 0.93 | -- | 0.727 | -- | 0.227 | 17.7 | -- | -- | -- | -- |
| 111.28 | 0.494 | 13.6 | 0.169 | 0.934 | -- | -- | -- | 0.23 | 17.7 | -- | -- | -- | -- |
| 130.69 | 0.532 | 13.7 | -0.56 | -- | 1.36 | -- | -- | -0.0692 | -- | 19 | 3326 | -- | -- |
| 88.53 | 0.438 | 13.6 | -- | 0.991 | 1.17 | -- | -- | 0.00311 | 17.3 | 19 | 2737 | -- | -- |
| 156.59 | 0.585 | 13.6 | 0.139 | -- | -- | -- | -- | 0.208 | -- | -- | -- | -- | -- |
| 112.04 | 0.495 | 13.6 | -- | 0.932 | -- | -- | -- | 0.211 | 17.7 | -- | -- | -- | -- |
| 133.36 | 0.538 | 13.6 | -- | -- | 0.952 | -- | -- | 0.0196 | -- | 20.52 | 1618 | -- | -- |
| 157.1 | 0.585 | 13.6 | -- | -- | -- | -- | -- | 0.192 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
|
Histogram 
|
Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 78.43 | temperature | 15 | 90 | > th | dose dependent | rect. | 8 | 19 |
| 3 | 78.54 | temperature | 10 | 270 | > th | dose dependent | rect. | 6 | 21 |
| 4 | 78.68 | temperature | 15 | 10 | > th | dose dependent | rect. | 9 | 19 |
| 6 | 78.80 | temperature | 20 | 4320 | < th | dose independent | rect. | 18 | 5 |
| 11 | 79.12 | temperature | 20 | 4320 | > th | dose independent | rect. | 18 | 5 |
| 14 | 79.20 | temperature | 20 | 1440 | < th | dose independent | rect. | 4 | 3 |
| 27 | 79.45 | temperature | 15 | 270 | > th | dose dependent | rect. | 17 | 22 |
| 34 | 79.63 | temperature | 20 | 1440 | > th | dose independent | rect. | 4 | 3 |
| 39 | 79.69 | temperature | 20 | 1440 | > th | dose independent | rect. | 17 | 14 |
| 48 | 79.80 | temperature | 20 | 1440 | < th | dose independent | rect. | 17 | 14 |
| 88 | 80.14 | temperature | 20 | 1440 | > th | dose independent | sin | 12 | NA |
| 122 | 80.33 | temperature | 20 | 1440 | < th | dose independent | sin | 12 | NA |
| 174 | 80.58 | temperature | 20 | 4320 | < th | dose independent | sin | 15 | NA |
| 179 | 80.62 | temperature | 20 | 4320 | > th | dose independent | sin | 16 | NA |
| 193 | 80.67 | humidity | 90 | 43200 | > th | dose dependent | rect. | 12 | 3 |
| 283 | 81.05 | temperature | 25 | 4320 | < th | dose dependent | rect. | 20 | 1 |
| 441 | 81.52 | wind | 3 | 43200 | > th | dose dependent | rect. | 1 | 1 |
| 503 | 81.67 | humidity | 90 | 43200 | > th | dose dependent | rect. | 13 | 1 |
| 505 | 81.68 | radiation | 1 | 14400 | > th | dose independent | rect. | 18 | 11 |
| 527 | 81.72 | humidity | 90 | 43200 | > th | dose independent | rect. | 11 | 4 |
| 544 | 81.75 | temperature | 15 | 4320 | > th | dose dependent | rect. | 20 | 1 |
| 625 | 81.94 | radiation | 1 | 14400 | > th | dose independent | rect. | 18 | 1 |
| 677 | 82.01 | temperature | 15 | 10 | > th | dose dependent | rect. | 9 | 15 |
| 847 | 82.25 | temperature | 25 | 1440 | < th | dose dependent | rect. | 17 | 12 |
| 888 | 82.32 | atmosphere | 995 | 43200 | < th | dose independent | rect. | 22 | 16 |
| 937 | 82.38 | atmosphere | 995 | 43200 | > th | dose independent | rect. | 1 | 11 |
| 938 | 82.38 | radiation | 1 | 14400 | < th | dose independent | rect. | 18 | 13 |
| 966 | 82.42 | atmosphere | 995 | 43200 | < th | dose independent | rect. | 1 | 11 |
| 987 | 82.44 | temperature | 20 | 1440 | > th | dose independent | no | NA | NA |
| 990 | 82.44 | atmosphere | 995 | 43200 | > th | dose independent | rect. | 2 | 9 |