Os07g0137200
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os07g0137200 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 196.66 | 0.659 | 9.19 | 0.00192 | 0.406 | 1.92 | -1.22 | -1.05 | 0.573 | 5 | 15.1 | 30 | -- | -- |
| 197.4 | 0.654 | 9.17 | 0.155 | 0.41 | 1.94 | -1.01 | -- | 0.617 | 5.26 | 14.27 | 29 | -- | -- |
| 199.88 | 0.658 | 9.17 | 0.113 | 0.411 | 1.99 | -- | -0.245 | 0.607 | 5.29 | 14.2 | 29 | -- | -- |
| 199.93 | 0.659 | 9.16 | 0.146 | 0.413 | 1.99 | -- | -- | 0.616 | 5.28 | 12.69 | 29 | -- | -- |
| 206.75 | 0.67 | 9.17 | 0.197 | -- | 1.7 | -- | -0.38 | 0.657 | -- | 14.4 | 7 | -- | -- |
| 236.68 | 0.721 | 9.1 | 0.523 | 0.363 | -- | 0.413 | -- | 0.895 | 12.1 | -- | -- | -- | -- |
| 237.18 | 0.721 | 9.1 | 0.537 | 0.368 | -- | -- | -- | 0.895 | 11.4 | -- | -- | -- | -- |
| 206.74 | 0.67 | 9.16 | 0.235 | -- | 1.65 | -- | -- | 0.671 | -- | 14.4 | 5 | -- | -- |
| 200.44 | 0.659 | 9.17 | -- | 0.431 | 2.06 | -- | -- | 0.591 | 5.15 | 11.08 | 29 | -- | -- |
| 245.66 | 0.732 | 9.11 | 0.527 | -- | -- | -- | -- | 0.892 | -- | -- | -- | -- | -- |
| 244.78 | 0.732 | 9.11 | -- | 0.362 | -- | -- | -- | 0.835 | 11.3 | -- | -- | -- | -- |
| 208.03 | 0.672 | 9.17 | -- | -- | 1.72 | -- | -- | 0.639 | -- | 13.29 | 5 | -- | -- |
| 253 | 0.742 | 9.12 | -- | -- | -- | -- | -- | 0.833 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 186.83 | radiation | 10 | 14400 | < th | dose independent | rect. | 2 | 5 |
| 5 | 186.86 | radiation | 10 | 14400 | < th | dose independent | rect. | 23 | 8 |
| 10 | 186.90 | radiation | 10 | 14400 | < th | dose independent | rect. | 19 | 12 |
| 13 | 188.04 | temperature | 30 | 43200 | > th | dose dependent | rect. | 8 | 2 |
| 27 | 188.31 | temperature | 30 | 43200 | < th | dose independent | rect. | 19 | 15 |
| 28 | 188.33 | temperature | 30 | 43200 | < th | dose independent | rect. | 8 | 2 |
| 33 | 188.37 | temperature | 30 | 43200 | > th | dose independent | rect. | 8 | 2 |
| 43 | 188.37 | temperature | 30 | 43200 | < th | dose independent | rect. | 23 | 11 |
| 61 | 189.17 | radiation | 10 | 14400 | > th | dose dependent | rect. | 5 | 2 |
| 100 | 190.27 | radiation | 1 | 43200 | > th | dose independent | rect. | 4 | 2 |
| 208 | 191.49 | temperature | 30 | 43200 | > th | dose dependent | rect. | 11 | 1 |
| 213 | 191.55 | humidity | 80 | 43200 | > th | dose independent | rect. | 16 | 5 |
| 218 | 191.59 | temperature | 30 | 43200 | > th | dose dependent | sin | 8 | NA |
| 221 | 191.67 | humidity | 80 | 43200 | > th | dose independent | rect. | 18 | 2 |
| 225 | 191.88 | humidity | 80 | 43200 | < th | dose independent | rect. | 17 | 3 |
| 276 | 192.26 | humidity | 80 | 43200 | > th | dose dependent | rect. | 20 | 1 |
| 312 | 192.58 | temperature | 10 | 43200 | > th | dose dependent | rect. | 8 | 2 |
| 315 | 192.61 | humidity | 80 | 43200 | < th | dose independent | rect. | 15 | 6 |
| 319 | 192.65 | temperature | 30 | 43200 | < th | dose dependent | rect. | 19 | 1 |
| 333 | 192.66 | temperature | 30 | 43200 | < th | dose dependent | rect. | 8 | 1 |
| 335 | 192.68 | temperature | 10 | 43200 | > th | dose dependent | rect. | 19 | 1 |
| 336 | 192.69 | temperature | 30 | 43200 | > th | dose independent | sin | 8 | NA |
| 355 | 192.76 | temperature | 25 | 43200 | > th | dose dependent | rect. | 20 | 1 |
| 358 | 192.80 | temperature | 30 | 43200 | < th | dose independent | sin | 8 | NA |
| 404 | 193.04 | humidity | 60 | 43200 | > th | dose independent | rect. | 4 | 12 |
| 438 | 193.12 | humidity | 60 | 43200 | > th | dose independent | rect. | 22 | 18 |
| 457 | 193.20 | temperature | 10 | 43200 | > th | dose dependent | rect. | 12 | 1 |
| 470 | 193.24 | temperature | 10 | 43200 | > th | dose dependent | rect. | 7 | 14 |
| 545 | 193.38 | humidity | 80 | 43200 | > th | dose independent | rect. | 8 | 14 |
| 550 | 193.40 | temperature | 10 | 43200 | > th | dose dependent | sin | 23 | NA |
| 589 | 193.47 | temperature | 10 | 43200 | > th | dose dependent | rect. | 12 | 10 |
| 655 | 193.57 | humidity | 80 | 43200 | < th | dose independent | rect. | 8 | 14 |
| 726 | 193.66 | humidity | 60 | 43200 | > th | dose independent | sin | 1 | NA |
| 766 | 193.70 | humidity | 80 | 43200 | < th | dose independent | rect. | 9 | 2 |
| 794 | 193.75 | temperature | 10 | 43200 | > th | dose dependent | rect. | 15 | 1 |
| 833 | 193.83 | humidity | 60 | 43200 | > th | dose independent | rect. | 10 | 14 |
| 853 | 193.85 | humidity | 60 | 43200 | > th | dose independent | rect. | 10 | 20 |
| 993 | 194.01 | temperature | 10 | 43200 | > th | dose dependent | no | NA | NA |