Os07g0134500
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Metallophosphoesterase domain containing protein.
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Os07g0134500 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Metallophosphoesterase domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 99.45 | 0.469 | 11.1 | -0.0335 | 0.0128 | -1.45 | 1.66 | 4.83 | -0.00551 | 3.14 | 20.42 | 3621 | -- | -- |
| 110.36 | 0.489 | 11.2 | -0.389 | 0.0548 | -1.78 | -1.47 | -- | -0.0202 | 14.4 | 13.34 | 22269 | -- | -- |
| 108.16 | 0.484 | 11.1 | -0.0202 | 0.0307 | -1.43 | -- | 4.92 | -0.00194 | 14.3 | 20.1 | 3768 | -- | -- |
| 115.65 | 0.501 | 11.2 | -0.485 | 0.333 | -1.8 | -- | -- | 0.00615 | 9.09 | 11.14 | 21557 | -- | -- |
| 108.17 | 0.484 | 11.1 | -0.0222 | -- | -1.43 | -- | 4.96 | -0.00517 | -- | 20.21 | 3767 | -- | -- |
| 156.53 | 0.587 | 11.4 | -1.89 | 0.22 | -- | -1.43 | -- | -0.64 | 12.9 | -- | -- | -- | -- |
| 161.56 | 0.595 | 11.4 | -1.95 | 0.338 | -- | -- | -- | -0.653 | 9.47 | -- | -- | -- | -- |
| 120.94 | 0.512 | 11.2 | -0.44 | -- | -1.8 | -- | -- | 0.0153 | -- | 10.65 | 22338 | -- | -- |
| 118.49 | 0.507 | 11.2 | -- | 0.314 | -2.11 | -- | -- | 0.154 | 8.96 | -12.59 | 21615 | -- | -- |
| 168.28 | 0.606 | 11.4 | -1.95 | -- | -- | -- | -- | -0.652 | -- | -- | -- | -- | -- |
| 261.52 | 0.756 | 11.3 | -- | 0.342 | -- | -- | -- | -0.436 | 9.9 | -- | -- | -- | -- |
| 123.3 | 0.517 | 11.2 | -- | -- | -2.09 | -- | -- | 0.147 | -- | -10.23 | 22370 | -- | -- |
| 268.55 | 0.765 | 11.3 | -- | -- | -- | -- | -- | -0.435 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 84.09 | radiation | 40 | 14400 | < th | dose independent | rect. | 17 | 15 |
| 4 | 84.96 | radiation | 40 | 14400 | < th | dose independent | rect. | 7 | 1 |
| 7 | 85.54 | temperature | 15 | 43200 | < th | dose dependent | rect. | 1 | 2 |
| 9 | 85.70 | radiation | 40 | 14400 | < th | dose independent | rect. | 22 | 10 |
| 10 | 85.77 | radiation | 40 | 14400 | < th | dose independent | rect. | 24 | 8 |
| 62 | 87.13 | atmosphere | 1015 | 43200 | > th | dose independent | rect. | 19 | 1 |
| 83 | 87.43 | temperature | 15 | 43200 | < th | dose dependent | sin | 9 | NA |
| 91 | 87.53 | temperature | 15 | 43200 | > th | dose independent | rect. | 24 | 1 |
| 129 | 87.96 | temperature | 15 | 43200 | < th | dose independent | rect. | 24 | 1 |
| 180 | 88.40 | temperature | 20 | 1440 | > th | dose independent | rect. | 5 | 1 |
| 183 | 88.42 | temperature | 20 | 1440 | < th | dose independent | rect. | 5 | 1 |
| 189 | 88.47 | atmosphere | 1015 | 43200 | > th | dose dependent | rect. | 20 | 1 |
| 208 | 88.61 | atmosphere | 1015 | 43200 | < th | dose independent | rect. | 17 | 3 |
| 301 | 89.25 | atmosphere | 1015 | 43200 | > th | dose dependent | rect. | 13 | 8 |
| 322 | 89.37 | radiation | 30 | 43200 | > th | dose dependent | rect. | 7 | 1 |
| 351 | 89.48 | temperature | 15 | 43200 | < th | dose dependent | no | NA | NA |
| 373 | 89.71 | atmosphere | 1015 | 43200 | > th | dose dependent | rect. | 13 | 5 |
| 424 | 90.15 | radiation | 10 | 1440 | < th | dose independent | rect. | 16 | 1 |
| 497 | 90.73 | atmosphere | 1015 | 43200 | > th | dose dependent | rect. | 14 | 1 |
| 508 | 90.84 | temperature | 15 | 43200 | < th | dose independent | rect. | 23 | 13 |
| 511 | 90.85 | temperature | 15 | 43200 | > th | dose independent | rect. | 23 | 15 |
| 516 | 90.89 | temperature | 15 | 43200 | > th | dose independent | rect. | 23 | 13 |
| 543 | 90.98 | temperature | 15 | 43200 | > th | dose independent | sin | 10 | NA |
| 580 | 91.07 | atmosphere | 1015 | 43200 | > th | dose dependent | rect. | 16 | 1 |
| 593 | 91.09 | temperature | 15 | 43200 | < th | dose independent | sin | 9 | NA |
| 676 | 91.41 | atmosphere | 1015 | 43200 | > th | dose independent | rect. | 14 | 6 |
| 703 | 91.52 | temperature | 15 | 43200 | > th | dose independent | rect. | 10 | 19 |
| 815 | 91.89 | radiation | 10 | 1440 | < th | dose independent | rect. | 15 | 15 |
| 825 | 91.93 | temperature | 20 | 1440 | < th | dose independent | rect. | 3 | 3 |
| 830 | 91.94 | radiation | 1 | 43200 | < th | dose independent | rect. | 10 | 1 |
| 834 | 91.94 | radiation | 1 | 43200 | < th | dose dependent | rect. | 10 | 1 |
| 845 | 91.97 | temperature | 15 | 43200 | < th | dose independent | rect. | 10 | 19 |
| 848 | 91.98 | radiation | 1 | 43200 | > th | dose independent | rect. | 10 | 1 |
| 920 | 92.17 | temperature | 20 | 1440 | > th | dose independent | rect. | 3 | 4 |
| 935 | 92.20 | temperature | 15 | 43200 | > th | dose independent | no | NA | NA |