Os07g0133700
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Hypothetical protein.
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Os07g0133700 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 66.16 | 0.382 | 10.7 | -0.0975 | 0.96 | -1.05 | -0.699 | 6.29 | -0.834 | 21 | 30.32 | 4907 | -- | -- |
| 68.74 | 0.386 | 10.8 | -0.83 | 0.942 | -0.689 | -0.847 | -- | -0.592 | 20.7 | 19.3 | 6060 | -- | -- |
| 65.83 | 0.378 | 10.7 | 0.155 | 0.915 | -1.04 | -- | 6.49 | -0.778 | 21 | 30.7 | 5491 | -- | -- |
| 70.21 | 0.39 | 10.8 | -0.806 | 0.924 | -0.65 | -- | -- | -0.596 | 20.9 | 19.19 | 6052 | -- | -- |
| 108.05 | 0.484 | 10.7 | 0.261 | -- | -1.04 | -- | 6.57 | -0.701 | -- | 30.6 | 5772 | -- | -- |
| 73.86 | 0.403 | 10.8 | -1.29 | 0.925 | -- | -0.768 | -- | -0.761 | 21 | -- | -- | -- | -- |
| 75.86 | 0.408 | 10.8 | -1.26 | 0.93 | -- | -- | -- | -0.759 | 20.9 | -- | -- | -- | -- |
| 117.63 | 0.507 | 10.8 | -1.12 | -- | -0.491 | -- | -- | -0.698 | -- | 19.19 | 6052 | -- | -- |
| 72.84 | 0.398 | 10.8 | -- | 0.927 | -1.07 | -- | -- | -0.363 | 21 | 18.4 | 47520 | -- | -- |
| 125.28 | 0.523 | 10.8 | -1.26 | -- | -- | -- | -- | -0.766 | -- | -- | -- | -- | -- |
| 117.81 | 0.508 | 10.8 | -- | 0.933 | -- | -- | -- | -0.619 | 20.8 | -- | -- | -- | -- |
| 123.17 | 0.517 | 10.7 | -- | -- | -1.06 | -- | -- | -0.378 | -- | 18.27 | 47520 | -- | -- |
| 167.26 | 0.604 | 10.8 | -- | -- | -- | -- | -- | -0.626 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 64.63 | temperature | 20.0 | 90 | > th | dose independent | rect. | 4 | 5 |
| 3 | 64.96 | temperature | 20.0 | 270 | > th | dose independent | rect. | 4 | 2 |
| 5 | 65.11 | temperature | 20.0 | 270 | > th | dose independent | rect. | 2 | 6 |
| 7 | 65.17 | temperature | 15.0 | 90 | > th | dose dependent | rect. | 4 | 4 |
| 13 | 65.39 | temperature | 15.0 | 10 | > th | dose dependent | rect. | 18 | 15 |
| 14 | 65.40 | wind | 1.0 | 1440 | > th | dose independent | rect. | 24 | 1 |
| 15 | 65.40 | humidity | 90.0 | 270 | > th | dose independent | rect. | 3 | 3 |
| 16 | 65.41 | temperature | 15.0 | 270 | > th | dose dependent | rect. | 4 | 2 |
| 19 | 65.49 | humidity | 80.0 | 270 | > th | dose dependent | rect. | 3 | 4 |
| 38 | 65.77 | humidity | 90.0 | 270 | < th | dose independent | rect. | 22 | 8 |
| 39 | 65.78 | humidity | 90.0 | 270 | > th | dose independent | rect. | 4 | 1 |
| 41 | 65.80 | wind | 1.0 | 1440 | > th | dose independent | rect. | 5 | 2 |
| 42 | 65.80 | wind | 9.0 | 4320 | < th | dose independent | rect. | 7 | 3 |
| 44 | 65.83 | wind | 1.0 | 1440 | < th | dose independent | rect. | 5 | 2 |
| 45 | 65.85 | radiation | 1.0 | 720 | > th | dose independent | rect. | 18 | 11 |
| 48 | 65.89 | radiation | 1.0 | 720 | > th | dose independent | rect. | 18 | 1 |
| 58 | 65.90 | wind | 1.0 | 1440 | < th | dose dependent | rect. | 6 | 1 |
| 60 | 65.92 | radiation | 10.0 | 4320 | > th | dose dependent | rect. | 17 | 14 |
| 66 | 65.96 | wind | 1.0 | 1440 | < th | dose dependent | rect. | 5 | 3 |
| 67 | 65.99 | atmosphere | 1015.0 | 90 | < th | dose dependent | rect. | 9 | 8 |
| 73 | 66.03 | atmosphere | 1015.0 | 10 | < th | dose dependent | rect. | 9 | 9 |
| 81 | 66.10 | radiation | 10.0 | 4320 | > th | dose dependent | rect. | 6 | 1 |
| 86 | 66.13 | wind | 9.0 | 270 | < th | dose dependent | rect. | 7 | 20 |
| 121 | 66.26 | wind | 7.0 | 30 | < th | dose independent | rect. | 9 | 19 |
| 126 | 66.29 | wind | 7.0 | 270 | < th | dose independent | rect. | 5 | 23 |
| 132 | 66.31 | radiation | 30.0 | 4320 | > th | dose independent | rect. | 16 | 16 |
| 135 | 66.31 | atmosphere | 1015.0 | 30 | < th | dose dependent | rect. | 9 | 19 |
| 142 | 66.37 | wind | 9.0 | 270 | < th | dose dependent | rect. | 8 | 18 |
| 146 | 66.39 | radiation | 30.0 | 270 | < th | dose independent | rect. | 2 | 9 |
| 153 | 66.42 | radiation | 30.0 | 4320 | > th | dose independent | rect. | 7 | 1 |
| 169 | 66.44 | humidity | 90.0 | 270 | > th | dose independent | rect. | 21 | 10 |
| 178 | 66.48 | wind | 7.0 | 270 | < th | dose independent | rect. | 7 | 20 |
| 181 | 66.49 | humidity | 90.0 | 270 | > th | dose dependent | rect. | 18 | 12 |
| 184 | 66.50 | atmosphere | 1015.0 | 10 | < th | dose dependent | rect. | 9 | 7 |
| 186 | 66.51 | humidity | 90.0 | 270 | > th | dose dependent | rect. | 21 | 9 |
| 195 | 66.54 | radiation | 40.0 | 270 | < th | dose dependent | rect. | 3 | 8 |
| 198 | 66.55 | temperature | 25.0 | 4320 | > th | dose dependent | rect. | 3 | 6 |
| 210 | 66.57 | temperature | 10.0 | 43200 | > th | dose independent | rect. | 10 | 7 |
| 220 | 66.59 | radiation | 1.0 | 720 | > th | dose dependent | rect. | 18 | 11 |
| 223 | 66.60 | temperature | 25.0 | 4320 | > th | dose dependent | rect. | 6 | 3 |
| 230 | 66.61 | wind | 9.0 | 90 | < th | dose dependent | rect. | 4 | 5 |
| 238 | 66.63 | temperature | 30.0 | 4320 | < th | dose independent | sin | 10 | NA |
| 248 | 66.64 | temperature | 20.0 | 90 | > th | dose independent | rect. | 4 | 17 |
| 254 | 66.66 | radiation | 10.0 | 270 | < th | dose independent | rect. | 4 | 2 |
| 256 | 66.66 | temperature | 30.0 | 270 | < th | dose independent | rect. | 15 | 12 |
| 264 | 66.68 | temperature | 20.0 | 10 | > th | dose independent | rect. | 18 | 15 |
| 265 | 66.68 | temperature | 30.0 | 4320 | > th | dose independent | rect. | 15 | 21 |
| 266 | 66.68 | temperature | 30.0 | 4320 | > th | dose dependent | rect. | 14 | 23 |
| 269 | 66.69 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 16 | 15 |
| 270 | 66.69 | temperature | 15.0 | 30 | > th | dose independent | rect. | 9 | 19 |
| 278 | 66.71 | atmosphere | 1000.0 | 90 | > th | dose independent | rect. | 4 | 17 |
| 281 | 66.71 | temperature | 30.0 | 4320 | > th | dose dependent | rect. | 17 | 22 |
| 283 | 66.72 | radiation | 40.0 | 30 | < th | dose independent | rect. | 4 | 5 |
| 289 | 66.73 | temperature | 30.0 | 4320 | > th | dose independent | sin | 10 | NA |
| 290 | 66.73 | humidity | 70.0 | 30 | > th | dose independent | rect. | 4 | 5 |
| 293 | 66.73 | humidity | 90.0 | 270 | < th | dose independent | rect. | 23 | 16 |
| 301 | 66.74 | temperature | 30.0 | 4320 | > th | dose dependent | rect. | 18 | 19 |
| 307 | 66.75 | temperature | 30.0 | 4320 | > th | dose dependent | rect. | 12 | 1 |
| 311 | 66.76 | wind | 7.0 | 30 | < th | dose independent | rect. | 4 | 5 |
| 313 | 66.76 | temperature | 10.0 | 30 | > th | dose independent | rect. | 4 | 5 |
| 315 | 66.76 | temperature | 30.0 | 30 | < th | dose independent | rect. | 4 | 5 |
| 316 | 66.76 | humidity | 50.0 | 30 | > th | dose independent | rect. | 4 | 5 |
| 318 | 66.76 | atmosphere | 995.0 | 30 | > th | dose independent | rect. | 4 | 5 |
| 319 | 66.76 | atmosphere | 1015.0 | 30 | < th | dose independent | rect. | 4 | 5 |
| 322 | 66.76 | temperature | 30.0 | 4320 | < th | dose independent | rect. | 15 | 21 |
| 330 | 66.77 | precipitation | 0.1 | 30 | < th | dose independent | rect. | 4 | 5 |
| 331 | 66.77 | temperature | 30.0 | 4320 | > th | dose dependent | sin | 11 | NA |
| 332 | 66.77 | temperature | 30.0 | 4320 | > th | dose dependent | sin | 2 | NA |
| 337 | 66.77 | temperature | 30.0 | 4320 | > th | dose dependent | no | NA | NA |
| 338 | 66.77 | precipitation | 0.1 | 30 | < th | dose dependent | rect. | 4 | 5 |
| 342 | 66.77 | temperature | 30.0 | 4320 | > th | dose dependent | rect. | 9 | 10 |
| 451 | 66.78 | radiation | 30.0 | 4320 | < th | dose independent | rect. | 16 | 16 |
| 452 | 66.78 | atmosphere | 1000.0 | 90 | > th | dose independent | rect. | 4 | 19 |
| 454 | 66.78 | temperature | 30.0 | 4320 | > th | dose dependent | sin | 23 | NA |
| 458 | 66.78 | temperature | 30.0 | 4320 | > th | dose dependent | rect. | 9 | 6 |
| 504 | 66.78 | temperature | 30.0 | 4320 | > th | dose dependent | rect. | 12 | 23 |
| 517 | 66.79 | temperature | 30.0 | 4320 | > th | dose dependent | sin | 21 | NA |
| 527 | 66.80 | temperature | 30.0 | 4320 | > th | dose dependent | sin | 19 | NA |
| 534 | 66.81 | temperature | 30.0 | 4320 | > th | dose dependent | sin | 17 | NA |
| 538 | 66.81 | temperature | 30.0 | 4320 | > th | dose dependent | rect. | 10 | 3 |
| 604 | 66.83 | radiation | 30.0 | 4320 | < th | dose independent | rect. | 1 | 7 |
| 608 | 66.83 | temperature | 30.0 | 4320 | > th | dose dependent | rect. | 14 | 5 |
| 649 | 66.85 | radiation | 10.0 | 270 | < th | dose dependent | rect. | 4 | 2 |
| 651 | 66.86 | radiation | 30.0 | 4320 | < th | dose independent | rect. | 7 | 1 |
| 685 | 66.88 | radiation | 30.0 | 90 | < th | dose independent | rect. | 4 | 7 |
| 687 | 66.88 | temperature | 30.0 | 4320 | > th | dose independent | rect. | 18 | 19 |
| 689 | 66.88 | radiation | 1.0 | 720 | > th | dose dependent | rect. | 18 | 1 |
| 690 | 66.88 | wind | 9.0 | 270 | < th | dose dependent | rect. | 4 | 2 |
| 710 | 66.89 | wind | 1.0 | 43200 | < th | dose dependent | rect. | 3 | 23 |
| 711 | 66.90 | wind | 1.0 | 1440 | < th | dose independent | rect. | 24 | 1 |
| 771 | 66.92 | atmosphere | 1010.0 | 270 | < th | dose independent | rect. | 4 | 2 |
| 774 | 66.92 | wind | 5.0 | 14400 | > th | dose independent | rect. | 24 | 15 |
| 775 | 66.92 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 7 | 20 |
| 782 | 66.92 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 7 | 20 |
| 796 | 66.93 | temperature | 10.0 | 270 | > th | dose independent | rect. | 7 | 20 |
| 814 | 66.96 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 4 | 2 |
| 816 | 66.96 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 4 | 2 |
| 825 | 66.98 | wind | 9.0 | 270 | < th | dose independent | rect. | 4 | 2 |
| 826 | 66.98 | temperature | 10.0 | 270 | > th | dose independent | rect. | 4 | 2 |
| 828 | 66.98 | temperature | 30.0 | 270 | < th | dose independent | rect. | 4 | 2 |
| 829 | 66.98 | humidity | 50.0 | 270 | > th | dose independent | rect. | 4 | 2 |
| 832 | 66.98 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 4 | 2 |
| 840 | 66.98 | wind | 5.0 | 14400 | < th | dose independent | rect. | 24 | 15 |
| 842 | 66.98 | temperature | 10.0 | 270 | > th | dose independent | rect. | 6 | 22 |
| 873 | 67.01 | wind | 7.0 | 14400 | > th | dose dependent | rect. | 5 | 5 |
| 884 | 67.02 | temperature | 30.0 | 4320 | < th | dose independent | rect. | 18 | 17 |
| 904 | 67.04 | temperature | 30.0 | 4320 | < th | dose independent | rect. | 18 | 19 |
| 905 | 67.04 | precipitation | 0.1 | 30 | < th | dose independent | rect. | 9 | 19 |
| 908 | 67.04 | precipitation | 0.1 | 30 | < th | dose dependent | rect. | 9 | 19 |
| 911 | 67.05 | temperature | 30.0 | 1440 | < th | dose independent | rect. | 22 | 12 |
| 915 | 67.05 | wind | 1.0 | 43200 | < th | dose dependent | rect. | 14 | 1 |
| 934 | 67.06 | temperature | 30.0 | 4320 | > th | dose independent | rect. | 8 | 5 |
| 953 | 67.06 | radiation | 40.0 | 270 | < th | dose dependent | rect. | 3 | 4 |
| 977 | 67.07 | radiation | 40.0 | 14400 | > th | dose dependent | rect. | 15 | 1 |